Zbog001168.1
Basic Information
- Insect
- Zaprionus bogoriensis
- Gene Symbol
- -
- Assembly
- GCA_035046045.1
- Location
- JAWNOI010000010.1:4944196-4950573[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.05 3.2 8.2 0.2 1 23 1470 1493 1470 1493 0.94 2 13 8.1 5.1e+02 1.3 0.2 1 23 1657 1679 1657 1679 0.91 3 13 0.00018 0.011 15.9 2.7 2 23 1682 1703 1682 1703 0.97 4 13 7e-05 0.0044 17.2 0.2 3 23 1711 1731 1709 1731 0.98 5 13 5.8e-07 3.7e-05 23.8 4.1 2 23 1738 1759 1737 1759 0.97 6 13 5.5 3.5e+02 1.8 0.4 5 23 1772 1790 1770 1790 0.96 7 13 1.4 87 3.7 5.4 3 23 1797 1818 1795 1818 0.93 8 13 0.15 9.2 6.8 0.2 2 23 1829 1849 1828 1849 0.96 9 13 5.6e-05 0.0035 17.5 0.4 1 19 1855 1873 1855 1877 0.95 10 13 1.6e-05 0.001 19.2 0.5 1 23 1885 1907 1885 1907 0.98 11 13 0.0001 0.0066 16.7 7.6 1 23 1913 1935 1913 1936 0.96 12 13 0.0002 0.013 15.8 5.9 1 23 1941 1963 1941 1963 0.98 13 13 0.029 1.8 9.0 8.2 1 23 1969 1991 1969 1992 0.95
Sequence Information
- Coding Sequence
- ATGGTTGACAGCATGCAGTGCCCCGTGTGCACCCTGTACCTGCATGCGGGCATGAATCTCTCCGATCACTTGGAGACTCATCCCAAGGAGCAGGTGATCAAGGCCTTGGTGCAGATGACCATCGTTGGCAGCAGTGTGGCCCCAAGCATAGGCAGTTCTCTGGCGACAGCGGTGCTCCCCACTGCTGGCAGTGGTGGAACCACAGAGGGTGGCAGTGTACCCCAGTCCAGTTGCACAACTTCCACCTCCCTGTCGATGCcatcttcgtcgtcgtcgtcgtcatcatcatcatcgacgtcctcgtcgtcgttgttgctcTCAACTGCTGTTGATGTAAAACCAGATGTGCCGGCACTAGAGATCACTGGCACAACGGCGTCGCTgggcataacaacaacaacaacaacagcaacaacgacgccaacaacagctgcggcagcaggagcaaccaCATTAAAGTCAGCAGTAACCAAAGCTGCGTCTTTGCTAGCaaatgcaagcagcagcagtagcaacagcaacagcaacaacaataacaataacaaatcgaGCAATCCACCGATAAAGGCAGTTAAAAGCGCGCCACCCCCGACTGAGGCGCCAGCCACCACATCCAACGCACCCACCACAAGCAGCGTGGCCGCTGTATATCCGCCAACGTTGACACCCGATTATCgctacgagcagcagcagcagcagcaacaaccgcCAGTAACATCTGCGCATGCTTTTGCGCGTGGCATCAGCACGTCGCTAGTGATACCACAaccgccacaacaacaacagcagcagcagcagcatttcctGGCCAACCAACAGCAGCCTGGACACTTcgcccagcagcagtcgcCCATGAAGTATGCGTATTCAGCAACGCTGCCTCctccgccaccgccgctgcaGCTATTTTCCCAGCAGCCAACGACAGCGCAGTCACATCAGAAGCCACCGCCCGCCTATGGAGCCGCCATCAGTCAAATTCGATCTCAGCACAAccaaaacaagcaacaacaacaacagcagcagcagcagcagcagcaacaaccacaaacaCATTTAACTGTACAACATAACGTAAACCTAGCACCACCAAGTGGGAAACACAGCAAAGCCCACACGGATACCTTTCTCAATCCACCGCCACAGTGCACGATGCCCTCATCGCTGTCACTAGCTGCGctgagctcctcctcctcaagACTGCAACACTCCCAACAGCCAACGcaacaacagccgcagcatcagcaacagtcgctgaccgccagcaacagtagcagcagcagcagcagcagcaacagcaacagttacaatgcagcaacagcagcaggttgCACCAGCGCGACGTccgctctgctgctgacaGGCACATCAAGTGTCGGACGCAGTGGTGGCAGTCGCCAAGCTACGAATTCGCCATTCGGTGCACTGTTGAATGCTGCGGCGCAAGCTGCCTGCGTCCCGCCCTCCGCCTCCGCTGGCGCTCCCTCTGTGCTACGTTATGCCGAGTCGCCGGTGGCACACTATCTGGAACGCGATAATGGCGACTTCATAGTCCAAGAGACGCCCAAGCACATCGTGGAGTGCGTGGAGAAGGAGGATGGAGGATTCTCCGTGATTGAGCGCATCTATCAGTCGCCACCCAGCGTGTTGCACATTCacgacgatgacgaggacgacgacgacgacgacgatgacgatgatgaggaggaagaggaggaggacaaGGCTCAGAGTTGGGCACACAGCGAGGACGAGGATCACGTGAAAGTATCGCATATGCATGTCGAGGATGGCGATGACGAGCGCGAGgacaacagccgcagcaggatTGGCCTCAAGCTGGCAACGAAACGCACATCGCGCAAGGCAAAGCCGAGCGGAAGGATAAACGCCCGCGGCTCcaagcatcagcagcaacccACAGTTACAGCCACAACAGAGGACGAGGATGACTTCATGAGCGTCGGCAGCAGTTGTGCCGAGAGTGACCACCAGGCGGAACAGCAGCTACATCAGCCccaccagcatcagcagcagccgccgcagcatgCGACGAGTGGTGCACAGTTGTCGTCATCGTCCAACGCGCAGCAACTCTGCACGGCACCCTCGACGagcagtgcagctgcagctgctgccgctgctgctgctgccagtgggACCGCATCCGGAAGTGGCAATACGACGAGCAGCACAAAGTCAAAGAAGAACCGAGTGACAGTGTTGAGCGATGTGCCGCTAAATATGAACGAGTATCTGGACCTGGTGGGCAACATTGTAGCCTCGAGTCGCATTGGTGCCAATCGTCCGTTTGCCGCCGTTGCACCCATTCCCCTGCTCAAGGTGGAAAAGGAGGAGCCGCTGGACGACTACGATGGCGTGCAGATTAATATGGAGGAGCAGAAGCCCAGCTTGGAGCATGCCagtggaagcagcagcagtagcagtcacagcaacagcaacagcaatgagCGTGGCACCACCAGCGTTATCAGAAtggccagcaccagcagtagtggcaacaacaattcagCCGAGGATCTCACACaggcgacgctgacgccgttGGCAACGGCGATGTCGCTGCAGGCTATCAAAGTCGAGGTGGAAGCaacgaagctgctgctgcagcggttCACAGCTCCAGCACAGCAGCGAGGGCCGAAGAAATTAGTCATCAAACCAaaggcgacagcgacggcaacggcaacgtcatcgacatcgacatcgacgaAAAAGACTGATAACAAcggtgccagcagcagcagcagcggcagcggcagcatctgCGTCGAATCTCTCAGCATATCAGCAAAGATGCAAGCGCCAACCGGCGAGCTGGTGCAGGTGAAGAGCGAGCGCACGGAagtggccagcggcagcataCTGGAGAAGCATCTGACCACCAGCTATGTgaccacgcagcagcagcagcagcagcaacaacagcaacaactgtcgCGCAAACACTCGTCTGTTAACGACGACGATGCCCGCGTGCTGCTGGAGTTTGCGAACTCCAATTcgaagcagcagacgcagacggGCACCACGTTTGTGGTGAATGCGGCAAGCTTTGCCTCCGCGGGCTCCGTCTTTGCCAATGCCAGTGGCAGTGcgagcggcagtggcagcaagaAGACCAACAGCAAGCCGGGCGAGGAATACATACTGCCCGATGATAACAATCTGGAAGTGGATGAAATTGTGATATCCTCCTCGTCTTCCTTAACTTCCTcctcgcagccgcagcagccgcaccaccacaacaaccaccaccaccaccaccaccatcaccatcagcacccgcagcaacaagcactatcgctttcgcattcgcatcaGCCGACGTCGTCGGCGCAGTCGCACTTGCAGGCGCCTGGGTTCAACGACTTCAACTTCTTGTACCATCAgagtgcggcggcagcaacaacagcgacaacttcGACTTCCAACTTTGCACCATTCGgtctgcagcaacagcaacagcaacagcagcatcagcatcagcacctGCAGCATGGCTCCAGCGAGGCAACCAATGCGGCGACACTGGCCTCGTCGTCGAGCAACTCTTCGGCCTTGGATCACGACTGCTCGATGAATGCTACGTTTCGTGTGGCCAAGCCGCAGTCAACAACTGGCGCCTGGTATAATGGCCACGAGCAGGCCGATCCACAATCGCaatcccagcagcaacagcagcatcagcagtcacagcagcagcaggcacagaaCGTGGAGCAACCGAGTAGTTTTATTGCCGCCTTGTCAGTTGTCGACTGCTGCAGCGTGACGGCGGTGGACAGCGATGCGAGTGATGCCAAGTATTTGGATCTGGACACCTGCAAGCGGGAGCAGCTGAGCAATAGCAGCAGTCACTTGCCATCGGTGTCGGCGTCCACGTCGACAACATCGTCGtctttcgctgctgccgcaaCGGAGAGCAGTTTGGTCGGTGGTTTGGGCCTGAACATACGCACCGACGAGAAGATGCCAGCCAAGGGTGAAATATCCGAGCAGGAGAGCAACTGTGACATTGAGAACTCCTGGAGTCAATCGATGTACGGCGACATATCACAGCGCTACTTTAGGAATCATTTCCCCATGGGCTACAGTCTGGGTTACTATCCGGAGCAGGATCTCAGTGGCCAGCAGTTGCCGcaggagcagcgggagcaaAAACGCTTTGATTTCAACGCCGTTGCGGTCAACTATGCACAGGCGCAGGGCGATCAGGACGCCTCCTCTAGTTCAGCGAGAAGCAATCATTTATTGGAGGCACAGCCCAGCAGCTCTTCCTCGTCGTCGGCATTGCTGGCTGGTCCACCAATTGCCTCGACCTCCAGGGCAGCCGCCGAGGCGGAGGCATTGGCGCAGCGCCGTAAGCCGCCGCGTCGCAAGATCTACAAGTGTCCGCACTGTGTGGCCATTTTCGAAAAGTTGAAGGAGCGCAATGCCCACATGATTGGCGAGCACAACTATGTGCGCCAGAATCGTCGCCTGATCTGCACTCAACCGCTGATCAGTGGTGGTGCAGGCttgtcacagtcacagtcacaggatgcgcagcagcaacaacaaataatgcTGCAATCGGACGGCAGCGATGCTGCAGAGTTGCACGAAGACTCCAAGGATGGTATTGTGAAAATAAAGCAGGAACATTGCCAGGACAAGCAAGACTCCTCTGAGCAGTTGCTCGACCAAATGGAGCTGCCCGATGTCAAGGATGCCGATTTGTTGGATGTCAATGGCGCCGATGGGCGCGATGCCGACATGAAACCACCGAACACCACTGTCACCGACGTGGACGAGAAGCCAGCGTTAGCGCCCTTGGCCATGACGACGCCAGCTGCCAAGTTGGCGGCCCTCTACCGCATGCTCATCGCCTACAACGAGTCGAAGCTGGGCCAGGAGCGCAACAATCTCAGCGAACTCGAGCAGAAGGCCATGGAGAAGTCGATCTTTCTGTGCTACGTTTGTCGCACCGACTTCCCCTCGGTCAAGCTGTACGACGCGCATCTCACCGAACATCCGGCCGAGTGCTTCACCTGCGGCAAGAAGTTCTATCGCTGGAAGAACTTCTCGTTGCATCTGAAACGTCATCTGGGCTGGAAGGAGTTCGGCTGCTATGTCTGCGACAAGAAGTTCGTCGTGCGCAGCGCCCTGGTCGAGCACATGCGCATGCACACGGGCCAGAGTCCACTCAAGTGCAAGATATGTGGCAAGAAGTTCAAGCGTTATTCGAACCTGACACAGCATCGCAAGCGGCATACGAAAATGATGGTGCGAAAGAAGGAATATGTGTGCCACTGCGGCGAGGTGCTGCCATCGAAGGCGCGCTTCCTGTGGCACAAGGAGACGCACGATCTGAAGCCCAAGTGCTGTCCCTACTGTTGTGATCGTTTCGTGCACGCCAACTCGCTGCGCCGGCACATTCGATTGGCGCATTCGGATAAGTTCGATTACGCCGAACCCATGGAGTGCCCCATGTGCAAGCAGATCTTCGCAAAGACATCGATAAAGGCGCACATGGCGACGCATTCGACGGACCCGCAATACGACTGCGCCATCTGCAACAAGAGCTTCTCGACCAAATGGAATCTCAAGATACATTCGTGGGTGCATGCCAACCGCACGGCGAAGCCCTTCAAGTGCGAGTACTGCCCCAAGGCGTTTGTGCGCGAATTGGACTTCAAGAACCACATGAACGCGCACAAACAGATCAAGCCGTACACCTGCGAGTATTGCGGCTGTAAGTTCATACGCAAGTACAACTATATGCGGCATCGGCGGGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAGTCCTTCCATCGGCATTACTATCTGATCGAGCATCGGCGCATCCATACGGGCGAGCGGCCCTTCCATTGCACCATTTGCGGCAAGAGCTCCACGACGAAAACCAATCACAATAAGCATCTGAAGATTCATCATTCGCGCGATCCCTTCACCGTCGAGGTCTGA
- Protein Sequence
- MVDSMQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSSVAPSIGSSLATAVLPTAGSGGTTEGGSVPQSSCTTSTSLSMPSSSSSSSSSSSTSSSSLLLSTAVDVKPDVPALEITGTTASLGITTTTTTATTTPTTAAAAGATTLKSAVTKAASLLANASSSSSNSNSNNNNNNKSSNPPIKAVKSAPPPTEAPATTSNAPTTSSVAAVYPPTLTPDYRYEQQQQQQQPPVTSAHAFARGISTSLVIPQPPQQQQQQQQHFLANQQQPGHFAQQQSPMKYAYSATLPPPPPPLQLFSQQPTTAQSHQKPPPAYGAAISQIRSQHNQNKQQQQQQQQQQQQQPQTHLTVQHNVNLAPPSGKHSKAHTDTFLNPPPQCTMPSSLSLAALSSSSSRLQHSQQPTQQQPQHQQQSLTASNSSSSSSSSNSNSYNAATAAGCTSATSALLLTGTSSVGRSGGSRQATNSPFGALLNAAAQAACVPPSASAGAPSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKEDGGFSVIERIYQSPPSVLHIHDDDEDDDDDDDDDDEEEEEEDKAQSWAHSEDEDHVKVSHMHVEDGDDEREDNSRSRIGLKLATKRTSRKAKPSGRINARGSKHQQQPTVTATTEDEDDFMSVGSSCAESDHQAEQQLHQPHQHQQQPPQHATSGAQLSSSSNAQQLCTAPSTSSAAAAAAAAAAASGTASGSGNTTSSTKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGANRPFAAVAPIPLLKVEKEEPLDDYDGVQINMEEQKPSLEHASGSSSSSSHSNSNSNERGTTSVIRMASTSSSGNNNSAEDLTQATLTPLATAMSLQAIKVEVEATKLLLQRFTAPAQQRGPKKLVIKPKATATATATSSTSTSTKKTDNNGASSSSSGSGSICVESLSISAKMQAPTGELVQVKSERTEVASGSILEKHLTTSYVTTQQQQQQQQQQQLSRKHSSVNDDDARVLLEFANSNSKQQTQTGTTFVVNAASFASAGSVFANASGSASGSGSKKTNSKPGEEYILPDDNNLEVDEIVISSSSSLTSSSQPQQPHHHNNHHHHHHHHHQHPQQQALSLSHSHQPTSSAQSHLQAPGFNDFNFLYHQSAAAATTATTSTSNFAPFGLQQQQQQQQHQHQHLQHGSSEATNAATLASSSSNSSALDHDCSMNATFRVAKPQSTTGAWYNGHEQADPQSQSQQQQQHQQSQQQQAQNVEQPSSFIAALSVVDCCSVTAVDSDASDAKYLDLDTCKREQLSNSSSHLPSVSASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNHFPMGYSLGYYPEQDLSGQQLPQEQREQKRFDFNAVAVNYAQAQGDQDASSSSARSNHLLEAQPSSSSSSSALLAGPPIASTSRAAAEAEALAQRRKPPRRKIYKCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICTQPLISGGAGLSQSQSQDAQQQQQIMLQSDGSDAAELHEDSKDGIVKIKQEHCQDKQDSSEQLLDQMELPDVKDADLLDVNGADGRDADMKPPNTTVTDVDEKPALAPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQSPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -