Basic Information

Insect: Zaprionus bogoriensis
Gene Symbol: -
Assembly: GCA_035046045.1
Location: JAWNOI010000066.1:1674844-1678579[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.35 22 5.6 4.7 2 23 323 345 322 345 0.96

2 19 4.8 3.1e+02 2.0 0.0 1 23 352 377 352 377 0.91

3 19 0.018 1.1 9.7 1.8 2 23 388 409 388 409 0.93

4 19 5.5 3.5e+02 1.8 3.0 2 17 420 435 419 446 0.75

5 19 7.7 4.9e+02 1.3 0.5 3 23 450 471 449 471 0.91

6 19 0.0068 0.43 11.0 0.3 3 23 479 499 477 499 0.95

7 19 0.0052 0.33 11.3 0.2 1 23 507 530 507 530 0.97

8 19 0.00055 0.035 14.4 0.3 2 23 535 556 534 556 0.97

9 19 4.1 2.6e+02 2.2 0.1 1 20 564 583 564 585 0.84

10 19 9.4e-05 0.006 16.8 0.4 1 22 604 625 604 628 0.90

11 19 0.18 11 6.5 0.3 6 21 638 653 635 654 0.93

12 19 0.22 14 6.2 0.9 1 23 673 698 673 698 0.95

13 19 0.032 2.1 8.8 1.4 2 23 714 736 713 736 0.93

14 19 0.00049 0.031 14.5 0.2 3 23 743 764 741 764 0.92

15 19 0.012 0.75 10.2 0.4 2 23 768 790 767 790 0.96

16 19 9e-06 0.00057 20.0 2.5 1 23 796 818 796 818 0.99

17 19 0.08 5.1 7.6 1.3 1 23 822 845 822 845 0.93

18 19 2.2e-06 0.00014 22.0 0.8 1 23 851 874 851 874 0.97

19 19 0.0075 0.48 10.8 0.2 1 23 878 906 878 906 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.35	22	5.6	4.7	2	23	323	345	322	345	0.96
2	19	4.8	3.1e+02	2.0	0.0	1	23	352	377	352	377	0.91
3	19	0.018	1.1	9.7	1.8	2	23	388	409	388	409	0.93
4	19	5.5	3.5e+02	1.8	3.0	2	17	420	435	419	446	0.75
5	19	7.7	4.9e+02	1.3	0.5	3	23	450	471	449	471	0.91
6	19	0.0068	0.43	11.0	0.3	3	23	479	499	477	499	0.95
7	19	0.0052	0.33	11.3	0.2	1	23	507	530	507	530	0.97
8	19	0.00055	0.035	14.4	0.3	2	23	535	556	534	556	0.97
9	19	4.1	2.6e+02	2.2	0.1	1	20	564	583	564	585	0.84
10	19	9.4e-05	0.006	16.8	0.4	1	22	604	625	604	628	0.90
11	19	0.18	11	6.5	0.3	6	21	638	653	635	654	0.93
12	19	0.22	14	6.2	0.9	1	23	673	698	673	698	0.95
13	19	0.032	2.1	8.8	1.4	2	23	714	736	713	736	0.93
14	19	0.00049	0.031	14.5	0.2	3	23	743	764	741	764	0.92
15	19	0.012	0.75	10.2	0.4	2	23	768	790	767	790	0.96
16	19	9e-06	0.00057	20.0	2.5	1	23	796	818	796	818	0.99
17	19	0.08	5.1	7.6	1.3	1	23	822	845	822	845	0.93
18	19	2.2e-06	0.00014	22.0	0.8	1	23	851	874	851	874	0.97
19	19	0.0075	0.48	10.8	0.2	1	23	878	906	878	906	0.89

Sequence Information

Coding Sequence: ATGTCGGAGAATTCGAAAATAAACAGCGAGACGGGGCCTAGCTGCCTGCATTGCAGAGTGCACAATTCAAAGCAGGCGTATCAGGAGATATTCGACGAGGTGGGCATCGAGATCGAGCTGTCCCATCTGCTGGCCAAGTACTTCCAGCTGCACGTCAAACCCAACGCCCAGAGGCGCCAGCTGCTCTGCCAGGAGTGCGTCAACACGCTCATTCGCTTCTTCGACATCGACGagctgcagcgcgagcagGATGCTGCCGACGCCAAGAGTACAGCCAAGCCGTTGCCCGCGTCGCCCGCTGCCGCCAAGCGAGATGCCAATGCTGCCAGAAAACAgacgccgccggcagcagcaaaagcgccATCTACAGTTGCGTCCAAGAAGCTGCCGCAGGCAGGCGATGTTCCCGCcaagccagcgccagcgtcggtgcccgctgcagctgccgtgcGCGTGACACGCGGCAAATCACTGGCCACACCGCCCAAGCGCATGCAGATTACGCCCAAAGTAAAGGGCGAACAAGGCAGAAAGTCCAAGGAgggcgagcaggagcagatAAGCGCGCTCATACGCGACATACTCAACGAGGAAGATGCGCCGCCGGACGAGAAGTTCGCCGAGGCTGCGGCCACAGTgcggcagctggaggagcaggaggaggctgGCGCGGAGcatggcgagcagcagcagcagcagcaggagcaggagaatcCAGATGAGCTTGAGTTTCTGGTGGAGCACGAAGATGATTCCTCCGACCTGGAGGACTTCAAGGAGATCAAGAAGGTCATGCCCGACGCTTTGCAGTCGGCAAACGAGACGCAAAGCGAGGACGAGTCCCTCAAGGTGGAACCCTTCAACTTTGTGCTGATCAAGGAGTCGGATGGCATTGACGATCTGTACGCCTACCTGTCCACCGTGGTGAAGACCTGCTTCGAGAAGCTCCGCTTCGAGTGGCCCACAGTGTGCCGGCACTGCTCGCTGAAGTGCAGCAAGTACGAGAACCTCTTGGGCCACATGCTCAAGCGGCATCAGCTGCCGGAGGAGCGATACAAGTGCCCCATCGAGGGCTGCACGGCGGAGCTGAAGGGTCGCAAATTTCTGGCCATGCACCTGGTGGTACTGCATGCCCCCGTGGCCGAAATCCCCATCTACGGCAGCTGCCCCGAGTGCAACATGACCTTCTCCAACATACTGCAGTACAACAAGCACTCCTGCGCGCACGTCATCAAGAAGCGCCGCGGCAAACGCCTGTACTGCGAGATGTGCGGCCTGGAGTTCCCCTCGTGGAAGCGCTTCAATTTCCACAATCAGTTCCATCTGGAGCGGCACAGGCCGCGCGCCTGCTTCGTGTGCGACTAtgcgaacaacaacatcgacgaTCTCTTCCAGCATCTGCACTACTCCCACGAGCCGGAGGGCACGCTCTTCTGCGATATctgcgATCGCAACTTCCGGGACGCGGCTGTCTTCATGGAGCACAGCAAGTCGCACGCCAACGTCAGCAGCACCACCTACAGCTGCTCCGAGTGCAGTGCGAACTTCGAGACGCGCGGCCGCCTCAACGGGCATGTGCGCTCCATACACGGCACCGTCATTAGCTGCGAGCTGTGCAGCCGCGAGTTCGCCACGGAGGCCACCTACAACATCCACATGAAGAAGCATCTGATCATCGAGCGTGAGGTGCATGTCTGCAACAATTGCGGCATGCTCAGCGAGAATCACGACAAGATGGTGGCACACGTGGAGAACGAGGAGTCGCCGTGCTATGGTGTGGATATCTacgtggagctgctgcgcgaTGCCTACGTGTGTGAGTACTGCTCGGCGTACTTCAAGCAGAAGTCCGATCTGCGGGCTCATCGCGACTCGGGCGTGCACAAGGACGGCAACTTCTGGTGCCTGCCGTGTGGCAAGCAGTTCGCCAACATGAAGCTCTATCGCAATCATCTGCGCAACtatcagctgcagcgcgcGGATGTGGCGCATCGCAAGCTCGAGATCTGCCTGTACTTTATGTGCGACTACGAGGACTGCTACGACTCGTACATCAACTGGAACTCGCTGTACACGCACAAGCGGCGCACGCACGACACTGTCGAGAAGCTGGAGTCGAAGACCAAGGCGGGCGAGTGGATCTGCCAGTTCTGCCAGAAGATTTGCCGCTCCAAGATGTCGCTGTCGGTGCACGTGGCGCGCAGTCACAACAACAACAACGTCATCTGCCCGGTGTGCAAGGCCTCGTATAAGGATCAGGAGGCACTGAAGAAGCATCACGCCTACTGGCACGAGCCCATGGAGTGTGCGCTGTGCCTGAAGAGCGTCAAGAATCGCCGCAACTTCGACACGCACATGAATGTGGTGCACTCGAACAACAAGCGCTACAAGTGCAGCGTCTGCCAGAAGGGATTCTACCACAAGAGCGAAATGGAGGCACATCAGCGGCTGCACAATCAACTCTTCAGCTGCCAGCAGTGCAGCTTCCAGACGCGCAACAAGAAGTCGCTGTCGGTGCACGTGCTCGGCCAGCACTACAAGCGCTTCGAGTTCGAGTGCAAGGTGTGCGACAAGCGCTTCGGGCGTCGTCAGGGCCTGACGAACCACATGCAGCGTGCGCACGGCTCCAAGTACACGTGTCGGGATTACTTCGATGGCGGCTGCAGCAAGTCCTTCGGATCGACGGCGCAGCTCAGCGTGCATGTGCGCAAGGTGCACAACAGCATGCTCTTGTTGGACGACGACAAagcagaggaggaggagggagaGGAAGCCGAGCTGGAGCAAGAGCtggaagaggagcagcagctggacgaggTGGAGCAAGTGGTGCCAGCGAAGCAGTCGCCACGCAAGAAACCTAAACATGCAGAGACTGCAGCCACGTCGAAGAAGCGTTGCATTCGCATCAACGACGATACGCAGATTGAGTTCATTGGCGGCGGCGACGAGGATgaggaacaggaacaggaacaggaacaaGAGGTGGAGGaagtggaggaggaggaggagataATCGAGGAGTTGCCGGCGGTCAAAACACAGCGCAGGCAGCCCCCAAGAAAGCGGCAGAGACGCACTTAA
Protein Sequence: MSENSKINSETGPSCLHCRVHNSKQAYQEIFDEVGIEIELSHLLAKYFQLHVKPNAQRRQLLCQECVNTLIRFFDIDELQREQDAADAKSTAKPLPASPAAAKRDANAARKQTPPAAAKAPSTVASKKLPQAGDVPAKPAPASVPAAAAVRVTRGKSLATPPKRMQITPKVKGEQGRKSKEGEQEQISALIRDILNEEDAPPDEKFAEAAATVRQLEEQEEAGAEHGEQQQQQQEQENPDELEFLVEHEDDSSDLEDFKEIKKVMPDALQSANETQSEDESLKVEPFNFVLIKESDGIDDLYAYLSTVVKTCFEKLRFEWPTVCRHCSLKCSKYENLLGHMLKRHQLPEERYKCPIEGCTAELKGRKFLAMHLVVLHAPVAEIPIYGSCPECNMTFSNILQYNKHSCAHVIKKRRGKRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCDYANNNIDDLFQHLHYSHEPEGTLFCDICDRNFRDAAVFMEHSKSHANVSSTTYSCSECSANFETRGRLNGHVRSIHGTVISCELCSREFATEATYNIHMKKHLIIEREVHVCNNCGMLSENHDKMVAHVENEESPCYGVDIYVELLRDAYVCEYCSAYFKQKSDLRAHRDSGVHKDGNFWCLPCGKQFANMKLYRNHLRNYQLQRADVAHRKLEICLYFMCDYEDCYDSYINWNSLYTHKRRTHDTVEKLESKTKAGEWICQFCQKICRSKMSLSVHVARSHNNNNVICPVCKASYKDQEALKKHHAYWHEPMECALCLKSVKNRRNFDTHMNVVHSNNKRYKCSVCQKGFYHKSEMEAHQRLHNQLFSCQQCSFQTRNKKSLSVHVLGQHYKRFEFECKVCDKRFGRRQGLTNHMQRAHGSKYTCRDYFDGGCSKSFGSTAQLSVHVRKVHNSMLLLDDDKAEEEEGEEAELEQELEEEQQLDEVEQVVPAKQSPRKKPKHAETAATSKKRCIRINDDTQIEFIGGGDEDEEQEQEQEQEVEEVEEEEEIIEELPAVKTQRRQPPRKRQRRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -