Basic Information

Insect: Zaprionus bogoriensis
Gene Symbol: -
Assembly: GCA_035046045.1
Location: JAWNOI010000030.1:169795-173859[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.6e-05 0.0016 18.6 1.0 1 23 150 172 150 172 0.97

2 15 0.00079 0.05 13.9 1.2 3 23 180 200 178 200 0.94

3 15 8.6e-05 0.0054 16.9 0.1 1 23 375 397 375 397 0.98

4 15 0.00089 0.056 13.7 1.0 1 23 403 425 403 425 0.98

5 15 3.2e-05 0.0021 18.3 2.2 1 23 456 479 456 479 0.95

6 15 0.00054 0.034 14.4 1.9 1 23 516 538 516 538 0.95

7 15 0.0035 0.22 11.9 0.2 1 23 544 567 544 567 0.98

8 15 0.025 1.6 9.2 0.4 3 19 576 592 575 593 0.95

9 15 0.00015 0.0094 16.2 5.6 1 23 602 624 602 624 0.97

10 15 0.024 1.5 9.2 0.4 2 23 630 651 629 651 0.96

11 15 8.7e-06 0.00055 20.1 1.0 1 23 660 682 660 682 0.98

12 15 0.00099 0.063 13.6 0.1 3 23 690 710 688 710 0.97

13 15 5.3e-05 0.0034 17.6 0.5 1 23 716 738 716 739 0.95

14 15 0.045 2.8 8.4 0.4 1 23 749 771 749 771 0.97

15 15 0.00051 0.033 14.5 0.2 1 23 1241 1263 1241 1263 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.6e-05	0.0016	18.6	1.0	1	23	150	172	150	172	0.97
2	15	0.00079	0.05	13.9	1.2	3	23	180	200	178	200	0.94
3	15	8.6e-05	0.0054	16.9	0.1	1	23	375	397	375	397	0.98
4	15	0.00089	0.056	13.7	1.0	1	23	403	425	403	425	0.98
5	15	3.2e-05	0.0021	18.3	2.2	1	23	456	479	456	479	0.95
6	15	0.00054	0.034	14.4	1.9	1	23	516	538	516	538	0.95
7	15	0.0035	0.22	11.9	0.2	1	23	544	567	544	567	0.98
8	15	0.025	1.6	9.2	0.4	3	19	576	592	575	593	0.95
9	15	0.00015	0.0094	16.2	5.6	1	23	602	624	602	624	0.97
10	15	0.024	1.5	9.2	0.4	2	23	630	651	629	651	0.96
11	15	8.7e-06	0.00055	20.1	1.0	1	23	660	682	660	682	0.98
12	15	0.00099	0.063	13.6	0.1	3	23	690	710	688	710	0.97
13	15	5.3e-05	0.0034	17.6	0.5	1	23	716	738	716	739	0.95
14	15	0.045	2.8	8.4	0.4	1	23	749	771	749	771	0.97
15	15	0.00051	0.033	14.5	0.2	1	23	1241	1263	1241	1263	0.98

Sequence Information

Coding Sequence: ATGAACAATCAGGACTATGGCGGCATCCAGTGGATACAGCAGCACGCATCTGCAGTCGACTCAGAGGCGGATATGCTGGAGGGCGGCGCGGGGGACAGTGAGGTGACTGCCGCTTACCTGGTGAACGGCAATGCAACCGACGAGGATCTCGACCATATGGCGGCCGAGAACCTCATCTTCATGGCGCGCGATGGCCAGCTGAGCGAAATAATCGCTGCCAACGAAGCCGGCGGCAGCACAGTCCTCATCAcagacagcggcagcgtcgcGTACGCCGAGTCATTCGACGATGATGCGCAGGTGGTAACCGAGGAGATCATCACCGATGATTGGGTGCAGCACCAAGGTGCCGAACGTGTGGAAATCGCAGCGGAGCAGATCGCTGGGAACTCAAATTCGCTGGAATTGCTGGACATGGAGCAGGACGAGTACACGGCGTTGCGTCCCTACCCATGCGATTTCTGCAGCCGGCGCTTCCGCAAGAAGGCAAGCCTCAATAACCACATGCTCGCCCATCAGAACGATCGTCCACATCTGTGCAAACTGTGCGGCGCGCGGTTCTCACGTCGCGCCGAGCTCATCAGTCACTTCAAGGCACATGCCGTGGCTCAGGATGCAGCAGatgcgcaggcagcggcggctgcttcGGTTAAGTTTGAGCCAaatcaccaccaccagcagcagcagcagcagcagcagcaggcgcagcacatgCAAATGGATGATCATTTCTATGAGCAGGAATGGCAACTGAATCAGGATCAGGAGCAAGAGCAAATACAAGATCAGGGCGCAGGGCAAATGGAGCAGGAGCATTTATCGGTGAGCAGCCAAGTAGTGCCGCAGGCAAGCTACGCTGCCGTCAGCTCTGTGCCAGCTCCGACGGCAGTGCGAGGACGCATAAGCCGCCTCAAGCCCAAGGAGGAGAGCACGCAGTACATTGTGATTGCcgacaagcaggcagcagacgaCTTGCAGGAGTACATGAATTGCGacgagctgcagccgccgctggTGGCCAATGCAACGGCGACGGACGCAACGGACAACATGGACAGCAGCCAAGCTGTTGAAGCTGCAGACGACGCCTCGCGCTTCCCAGTGCTGGATGACAGCAAACCCTTTGTGTGCCAGCAGTGCGGATTGGCATTTGCTCGCGAGAAGGCGCTCGTCTCGCATATAAAGAATCATCGCATGGACTCGCCCTTCGAATGCAATCAGTGCCAGGAGATGTTCTGGGACAACTTCAGCCTGCAGGAGCACCAGAAGACCCATCAGTTCGAGGAGAGCAACTCTGAGTACGATCCAGCGTCGGCGGGCGAGGACAGCGCCAGCGAGTCTGAGGCAGATCAGCTCTACGGCGACTTCTACTGCAGCGAGTGCGGCATCTCGTTCCACAGGCAGGACCTGCTGCGCCGGcatgccaagcagcagcacaagctggGCAGCAGCACTAGCGCAGGCAACGCTGCGGCTGCACTCAACGCGGCGGACATGGAGGGCACTGCAGATGCGGATGCTGCCGACAATGCCAAAGATGCACTGCACTGCTGTCACACCTGCGGCAAGTCGTTTCCCAGCGCATTGGAGCTGCTCGCTCACGCCGAGGTCCATGCGCGTTTCCCGCCATTCAAATGTGTCTTATGTGGTATCAGCTTTTACGAGGAACCTGCCATTAAACGGCATCTGAACACTCGTCATCCCAACGAGCTGAAGCCGAACTCGTGCGTGCTGTGCGGCAAGGAGTGCCGCGATCGCAAGGCGCTGATCAAGCACGCCTGGGATCATTCGCGCGAGAAGTGCCACTCGTGCTCGAAGTGCGGCAAGAACTTCCACAACAAGGCGCGCCTGAAGCGACACATGGCCTCGCATCGCGACAAGTCGGTGGTCTGCGAGGTGTGCAACGAGGAGTTTCCCGATGGCCGCACCCTTTCCAATCATCGTCATTCGCACAGCACCACGTCGCCGGGCAAGCTCTTCCCCTGCCACGAGTGCGGCAAGACTTTCGGCTCACGCAGCTCGCAGCAGATTCATGTGCGCATCCATACGGGCGAGCGTCCCTATGGCTGTCGGTACTGCTGGAAGGCCTTCGCCGACGGCGGCACACTGCGCAAGCACGAACGGATCCATACGGGAGAGAAGCCCTATGCCTGCAGCGTGTGCCCACGCGCGTTCAATCAGCGTGTGGTGCTGCGCGAGCACATACGCTCTCATCACTCTGGCAAGGATGCCGTCCGTGGCACGTACCACTGCACTGTCTGCTCAGCCGATTTATCCTCATCAAATGATCTGATCCAGCATCTCATCCAGCACAGCGACACGAACACAGCCAAACAGCGGCAGCCCATTACTGGTCCCCGCAAGTACAAGCGACGCAGAAAACTGCAGCCGCACGAAATCGCACACATGCGTGCCGAGAACAAGGATGGCGAGGACTACGCCAGCGACATGGATGGCGACATGGAGGGCGACATGGACCGCGACATGGACGGCTATCAGATTGATTCGCTGGTGGTTGTCAATGATACCACACTGCAGCCCGTGAGCTCATCCATCAGCACGAACACGTCCAAGACGCGACGCAGcggaaagcaacagcagcagcagcaggcagcggcgcagtcgcagtcgagcaacagcagcaagtcagcggcagctgttggagtggcagcggcaactgctggTGAGGAGAGCAGCAAATCGAACAGCACCTCCGTTTCAgctggcagccgcagcagcagcagaaagaagaCTGGAAAGACGGCCAAGAGTTTGGGAAATGCCGCTGGCACTTCCAGCAGCGCACGTCCTCGCATGATCCACACGGAGAAGTCGCGCGTGCCGCAGGAACATGCGACCAAGAAGACTCGTGGCCGGACATACGTGACGCGCACGAGCACCAGTGAGGCCAGCCAGCTGGGTCTGGTTAAGTCAAGCAGCGTGGCCAGCTCGCGCATCGTGGATGACTACGAGATAATTTCACCTGCCCTACAGCCGCCCAATCAGATTAGCTCCAGTCCGCTGCACatcaagcaggagcaggagcagcagcagcgtgtccAGCTACTGTACGATGATACGCATCTGCTGATCGATGCGGGACTGTTGCGCGAGAAGACCTACGATAAGTTCAATCCGAGCATAGTCAATGATCTGGAGGAGATCCTGCGCAGTCCGCTCAAACACGATCGCAATGCACGCCTGCGTTTCACCAGCGAATCGTCGACAACGCCGCAGTTCCTgcccgaggaggagcagaatCTTATCAAAATAGAGCCGACGTCGCCGGACTTGCGCGAAATGGTGGAGAGCCAGCAGCGCGTGTCGTCCACACACGCAACCACACCCACAGCCTCATCGTCGGCGGCGCGCACATCGCGCCACCTGCGCCAGCTCACTGCCAACTCCAGTTCCCGGGCGGCCAcaaagcgcagcagcggcagcaaaagcagcagcaaaacgtCCTCCGGCTCCAGTTCGAagaagtcgtcgtcgtcatcgtcggcgTCCGCCGTTGCAGCCAGCAAGACGAACTCGTATCTGCACTACGGCGTGGACTCGTACAACGTGAGTGCAGGCACCAATGCCAGCGCTTCGGATGTCAGCTCTGGATTCTTCTCCATCTCCGAGGTGGTCTCTGCAGCTGATGCCGCCGATGCAGCGGCCAaagaggcggcggcagcggcagcggccaaCAAGTCGGAGCGCCGGACGCGTTGCTTCGAGTGCGAGATGTGCTCGGCGAACTTTCCGGATCGCGCTCAGCTGCTCGATCACATGCACATTCATATCTGA
Protein Sequence: MNNQDYGGIQWIQQHASAVDSEADMLEGGAGDSEVTAAYLVNGNATDEDLDHMAAENLIFMARDGQLSEIIAANEAGGSTVLITDSGSVAYAESFDDDAQVVTEEIITDDWVQHQGAERVEIAAEQIAGNSNSLELLDMEQDEYTALRPYPCDFCSRRFRKKASLNNHMLAHQNDRPHLCKLCGARFSRRAELISHFKAHAVAQDAADAQAAAAASVKFEPNHHHQQQQQQQQQAQHMQMDDHFYEQEWQLNQDQEQEQIQDQGAGQMEQEHLSVSSQVVPQASYAAVSSVPAPTAVRGRISRLKPKEESTQYIVIADKQAADDLQEYMNCDELQPPLVANATATDATDNMDSSQAVEAADDASRFPVLDDSKPFVCQQCGLAFAREKALVSHIKNHRMDSPFECNQCQEMFWDNFSLQEHQKTHQFEESNSEYDPASAGEDSASESEADQLYGDFYCSECGISFHRQDLLRRHAKQQHKLGSSTSAGNAAAALNAADMEGTADADAADNAKDALHCCHTCGKSFPSALELLAHAEVHARFPPFKCVLCGISFYEEPAIKRHLNTRHPNELKPNSCVLCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVVCEVCNEEFPDGRTLSNHRHSHSTTSPGKLFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGKDAVRGTYHCTVCSADLSSSNDLIQHLIQHSDTNTAKQRQPITGPRKYKRRRKLQPHEIAHMRAENKDGEDYASDMDGDMEGDMDRDMDGYQIDSLVVVNDTTLQPVSSSISTNTSKTRRSGKQQQQQQAAAQSQSSNSSKSAAAVGVAAATAGEESSKSNSTSVSAGSRSSSRKKTGKTAKSLGNAAGTSSSARPRMIHTEKSRVPQEHATKKTRGRTYVTRTSTSEASQLGLVKSSSVASSRIVDDYEIISPALQPPNQISSSPLHIKQEQEQQQRVQLLYDDTHLLIDAGLLREKTYDKFNPSIVNDLEEILRSPLKHDRNARLRFTSESSTTPQFLPEEEQNLIKIEPTSPDLREMVESQQRVSSTHATTPTASSSAARTSRHLRQLTANSSSRAATKRSSGSKSSSKTSSGSSSKKSSSSSSASAVAASKTNSYLHYGVDSYNVSAGTNASASDVSSGFFSISEVVSAADAADAAAKEAAAAAAANKSERRTRCFECEMCSANFPDRAQLLDHMHIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01552585;
90% Identity: -
80% Identity: -