Basic Information

Gene Symbol
ct
Assembly
GCA_035046045.1
Location
JAWNOI010000075.1:1582590-1622516[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.3e-27 5.8e-23 80.5 0.0 3 72 1199 1269 1197 1274 0.95
2 3 7.3e-32 5.7e-28 96.6 0.0 3 77 1722 1797 1720 1799 0.96
3 3 4.4e-31 3.5e-27 94.0 0.0 3 76 2002 2076 2000 2079 0.96

Sequence Information

Coding Sequence
ATGCTGCATGCAGGAATTCTTCAAGGAGAAGAATACGAGCACACGAGCAGGGCAAAACGCGCTACACTTGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTATCGACCAGCAGCACGcccggcagcaacaacggcgacagcaacagcaacagcaacagcaacagcaacagcgacaacaacaacagcagcagcttggccacagcaacagcgacagcaacaacagcagcagcagcagcagcggccgccgcggcagcagcagcagcattggcaaACGAAACcaacgagcaggaggaggaggccaacggcaacggcaacggcaacggcagcgccagcaacatcgacagcggcagcaaaaagcTGCTTAACAGCTCCATCGTTGCAGCGGCACTCACGCTGCAGCAACAGAACGGCGGCAATCTGCTGGCCAATACGAACAcaccgtcgccatcgccgccgctgctgagcgccgagcagcagcaacagttgcagagCAGCCTGGCGACGCAGAACGGCGTCGGCGGTGCCTGTTTGAATCCGAAGCTCTTCTTCAATCACGCCCAGCAAATGATGATggaggcggcagctgctgctgctgctgccgccgctgcagcggcagcggcagcacaacaacagcaacagcaacagcaacaatcgcCCATGCattcgccggcagcagcaacagcaacagcgacagcgacagcagcagcagcaacaaatccagcaacagcggcaacaacagctgttgccgcacaacagcagcagcagcagcagcagccaattGCCGAGGcaaacgccagcagcagcagcaattgccacgacgacgacgaggacgaggacgaggaggacgcATCGATGCAATCAAATGTGGCGCATGCCGACGGAGATCTGGACGATGATGAtatggagctggagccagagcatgttgctgctgctgatgccgcCGCTGAGCAATCAGCAAGAACTGAAAGTGTTGCCGATGCGacgcaacaagcagcagcagcagcagcggcggcagcagcggcagacgatgacgaggagcaggacgatgaggatgttgctgctggcgttggcgatgatgttgccgtcgtcgccgtcgagcatgaggatgaggatgaagAAGCTAGTTTAAATGTTAGCAATaatcataacaacaacaacaacaataccgATAGCTGTAGtcgaaagaacaacaacaacaacaagaacagtgAGGCGCAACATGTTGCACTGCGTGATAATAATGTAAATGAGCAACATGTGGCACACAGCGCCGCAGACGATGActgcgccaacaacaacaccaacaccagcaacaacaacaacaacaacaacaccaacagcaacagcgagaagcgcaagaagcgcagcgccaacaacaacaataacaacaacaacaacaatcaaccCGCTGTTCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGCTGCAACGCCTGCGCGCCCTGGAGCAGACTCACCTGGTACAAATCCAGCGGCTCGAGGAGCATCTGGAGGTGAAGCGCCAGCACATCATGCGCCTGGAGGCGCGTCTCGACAAGCAGCAGATCAACGAGGCCCTCGCCGAGGCGACTGCCCTCGCTGCGGCCGtcaatgctgctgctaccaacaacaacaacaataacaacaacaacaccaccaccagcaatagcaacaacaacaacaacaacagtagcagcaacaacaacaacaatcacagcagcagcgagaacaacaacgatgCGAGCGTCTTCAAGTCGACGGACCTGACAACGATCAaggacgatgacgatgacgaggacAACGAACTCGATCGCAGCGAGCTGCGcgatggcgacgacgacgaggacatGGAGATCACCAGCAGCGATgcacagcaccagcagcagcagcacgcaatTGGTAACAATCGGcacgaggacgaggacaacGATGAGGAGGAGGTCGATGAGCACGATGCGGATATGTCCAATGTCGCCGCGTCAGCGGAGAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGATCTGAACGTGCTCAGTCCACAGTCGGCgatcgccgctgctgccgccgccgcagcagccgccgcctgcGCCAACGATCCCAACAAATTCCAAGCGCTGCTCCTGGAGCGGACCAAGGCACTGGCCGCCGAGGCGCTGAAGAACGGCGCCAGCGACGCCGTCAGCGAAGAAATGCCGCAGCAactcgccgcagcagcagcagcagcaacagcagcagcagcagcagcagcagtagcagcagaggcagcagcaacagcaacagcaacaacagcaactacagctgCAGAGGCTGATGTTGTAGCACAAGTCACGGTgccagtcacagtcacagtcacagccaaGTCCGAGTCCGAAACGAGTAGAAAAGAAACGGACACGCTGCAGGCGAATTTGCAGCCCAAAGTCGAGATCGTCGATGCGGACGACATCGATGAGGCTAATGCCGTCGAGCAGACGCTGGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTCGAGactggcacagcagcagcagcagcagcaactggaaaCAAAACGCCAACAATTTATCAAAATGCCAACgcggtgcagcagcagcagcaactgttgccaccgccgccgccgccagcgccagcagcacagcagcaacagcaacagcactttgccacgcagcaacaacaacaacaacaacaacagcaacaacaacaacagcaacactatcaacagcaacaacaacagcagcagcagcagcagcttggacCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATACAAATCACTCCTCTTGTTCCAATTCCAAATCGACCCGTCTAGACGCCGGACATCTgccacaccagcagcagcagcagcaacagcagcactcgcagcagcagcactcgcatcaccacaacagcagcaacagcaacagcagcagcggcgctgcCGGCAGCGATGCACTGAATCACCATCAtctccaccagcagcagcaacagcagcagcaacagcagcagcagcagcagcagcagcagcacgcggcgCACCATCACCACGGGCAACTGTTGCACGCACATCATTTGCATCACGCCGGCGACTCGAACTCGTCCAGCGCGAACAGCACaccgaacagcagcagcgcggccacAGCGCAGCTGGCGGCGAGCATTGCCAGCACACTGAACGGCAgcaagtcgctgctgcagcaggccgctgccgccgccgtcgccgtcggcgaTGATGCGAGCAATGGCCTGACGCCGAGCGCgaacgcagcggcagcagcggccgcgATGGCAGCACATGCTCAGCATGCCGCTGCCCTGGGCGCGCCGCAATTCTTGCCGAGTCTGCCGGCCTTCCAGTTCGCCGCCGCGGCCGCTGCCGGCCAGGATGCGCGCGCGCACTTCCGTTTCGCGGACGcggagctgcaactgcagccgggCGTCTCGATGGCCGGTCGCCTGGGCGAATCGCTCATACCCAAGGGCGATCCAATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAACCAGGCGCTGGATACCCTGCACATCTCGCGGCGCGTCCGCGAACTGCTCTCGGTGCACAACATCGGGCAGCGGCTGTTCGCCAAGTACATACTCGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCCAAGCCCTGGGACAAGCTGACCGAGAAGGGGCGCGACAGCTACCGCAAGATGCACGCCTGGGCCTGTGATGATAATGCGGTGATGCTGCTCAAGTCGCTCATACCCAAGAAAGACTCTGGCTTGCCGCAGTATGCCGGTCGCGGCGCTGGCGGCGATGATTCCATGTCGGAGGATCGCATCGCGCACATTCTCAGCGAGGCCTCGTCGCTGATGAAGAGCAGCGCCGtcgctgcgcagcagcagcagcagcagcagcaggagcatcAGCGTCGCCATGTCGACGATACGCACAGCAATGAGGACAGCAAGTCGCCGCCGCAGAGCTGCAGTTCGCCGTTCTTCAAGGTGGAGCATCAGCTgaagcagcaccatcagcagcagcagcagcagcagcaggcagcacagcagcagcatgcggcggcagcgcagcaacaggctgcacagcagcagcaacagttgcatgTTGCCGATGTGCATGTGCAGCGCGAACAGCGCgaggcggcggctgcagcggccgctgtcgctgtgcaccatcagcagcagcagcagcagcgcgaacagcgcgagcagcagcagcagcagcatcggctGCGACACGAGGATCTGCCACACGACAAGATGGCGCGTCTGTATCAGGAGCTGATGGCGCGTACGCCGCGCGAAGCAACCTTCCAAAGCTTTCTGCTATCGCCATTCTTTGGCGGCGCTGCCGGCATGCCCGGCGCAGCGAGCAATCACTTCCCCGCCGCCATGGCCGCCGACGAGAACATGCGGCATGCGTTCGAGCGCGAAAttgccaagctgcagcagcagcaccagcagcaagcggcgcagcaggcgcaggcccaggcccaggcgcaGGCTCAGGCCCAGGTGCAGGCGGCCAACTTCCCGAACTTCTCCAGCCtgatggcgctgcagcagcaggtgctgaACGGCGCGCAGGATCTCTCGCTGGCCGGCAAGGAGATCAAGCTGAATGGCCAGCGCTCCACGCTCGACCAgcacagcggcggcagcagcagcacctgctccAAGGACGGCACcgagcgcagcagcgacgaGCGCAGTTTCGCTCTCAAATCGGAATCGGGCGCCGTCTCAGTTggaggcggtggcggtggcaatACACCCGCACccacagcagcgccagcagcttcGACAGCTGCGAACGCCGTCGCCGTGGCAGCAGCCGTCGCCGGCAATGCGAGCAGCAATTCGGCGGCGCCAAGTCCGCTGAGCAACTCGATACTGCCGCCGGCGCTGAGCAGCCAGGGCGAGGAGTTCGCGGCGACGGCCAGTCCGCTGCAGCGCATGGCCTCCATAACGAACTCGCTGATCACACAGCCGCCGGTGACGCCGCATCACGCACAGCCGCAGCGGCCGACGAAGGCGGTGCTGCCGCCCAtcacgcagcagcagttcgacATGTTCAACAACCTCAACACCGAGGACATTGTGCGGCGCGTCAAGGAGGCGCTCTCGCAGTACAGCATCTCGCAGCGTCTGTTCGGCGAGTCTGTGCTGGGCCTGTCGCAGGGCTCCGTCTCGGATCTGCTGGCGCGCCCGAAGCCCTGGCACATGCTCACGCAGAAGGGCCGCGAGCCCTTCATCCGCATGAAGATGTTCCTCGAGGACGAGAACGCCGTGCACAAGCTCGTCGCCAGCCAATACAAGATCGCGCCGGAGAAGCTCATGCGCACGGGCTCCTACAGCGGCAGTCCGCAGATGCCGCAGGGCCTGGCCGGCAAGATGCAGGCGACGCTGCCCATGCAGAAGATGATGaacgagctgaagctgcaggagCCCGCCCAGGCGCAGCACATCATGCAGCAGATGCAGGCCGCCGCAGCCATGTCCGCGGccatgcaacagcaacagcagcagcagcagcagcagcagcaggccgctgCCGCGCAGGCAGCcgcacaggcgcaggcgcagagcgtggcacagcagcagcagcagcaacagcaagtggcagcgcagcagcagcagcagcagagcgtggcacagcagcagcagcaagtggcagcgcagcaggcgcaactGCTGCATCATCAGAACATGCTGCTGACGTCGCCGGGTCTGCCGCCGCAGCATGCAATCAGTTtgcccgctgccgccgcagtcgcagctggcgCCGGCGCCGTTGTCGCTGGCGAGAAGAAACCAATGCTGATGCCGGTGCACGGTGGGGCACATGCGCCGAACGCGATGCGCAGCCTGCACCAGCACATGTCGCCGACGGTGTACGAGATGGCGGCACTCACGCAGGATCTGGACACGCACGACATCACGACGAAGATCAAGGAGGCGCTGCTGGCCAACAACATTGGCCAGAAGATCTTCGGCGAGGCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCGGAGCTGCTGAGCAAGCCGAAACCCTGGCACATGCTCTCGATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTGTGGCTGAGCGACGCTAACAATGtggagcgcctgcagctgctgaagaACGAGCGGCGCGAGGCGAGCAAGCGCCGTCGCAGCACTGGACCCAATCAGcaggacaacagcagcgacaccTCCAGCAACGACACCAATGACTTCTATACGAGCAGCCCCGGCCCCGGGTCGGTGGGCTCCTCGGTCAGCGGTGCGCCGCCCAGCAAGAAGCAGCGTGTGCTCTTCTCCGAGGAACAGAAGGAGGCACTGCGTCTGGCCTTTGCGCTCGATCCGTATCCCAATGTCGGCACCATCGAATTCCTCGCCAACGAGCTGAGCCTGGCCACGCGCACCATTACCAATTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCGCACGGCCAGCCCGGCCAGGACAATCCCATACCGAGTCGCGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTCCGcatactgctgcagcagcgcctggtCGAGCTGCACAAGGAGCGCATGGGCCTGAGCGGTGCGCCCATACCGTACCCACCGTActttgccgccgccgcgctgctCGGCCGCAGTCTCGCCGGCATTCCGGGcgccgcggcggcagcgggcgctgcagccgccgctgcggcCGCTGTCGGCGCCGCCGGCGGCGATGAGCTGCAGGCCTTGAATCAGGCCTTCAAGGAGCAGATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGACGACTACCAGGACGAGCTCGAGCACAACATGAGCGACAGCGAGTCGCTCGagggcgccggcgccggcgacagcgctgccacggcgacggcagcggcagcggccaaCGCCGTCTCCGAGTACGAGAAGGCGCTGCAGAAGACGGCGCTCGCGtcggccgccgctgctgccgtgtATATGAGCAACGCGGCGCGCAGTTCGCGCCGCAAGCCCGCCGCACCGCAGTGGGTCAATCCGGCGGCGGCGAGCACGCCCAAGGCGGCGGGCGTGGCCGGTGTGGCCGGCGGCGTGGCCGTCGATGGCAGCGAGCGCATCATCAACGGCGTCTGCGTCATGCAGGCCTCCGACTATGGGCGCGACGATGGCGACAGCGTCAAGGatggcggcgccggcggcggcagcgaggcCGAGCAGGACGAGCATGCGCAGCTGGAGATCGAGCAGCGCTTCATGGAGCCGGAGGTGCGCATCAAGCAGGAGGagaacgacgacgaggacgaggatgagcagctgcagcagctgcagcagcagcagcacgacgagAGCAGCGCTCGCAGCGATGCCGGGGACGTCGTCGGCctgggcgagcagcagctgaaggtcATCAACGAGGAGAAGCTGCGCCTGGTGCGCGTGCGGCGACTGAGCAGCAACGGCGATGCCGAGGAGCTCTgcgcggcgcagcagcagcagcaggcagcgactgcagcggcgccagcagcggcagcagcagcgtggaACTATTGA
Protein Sequence
MLHAGILQGEEYEHTSRAKRATLAEKEVNTLKEQLSTSSTPGSNNGDSNSNSNSNSNSDNNNSSSLATATATATTAAAAAAAAAAAAAALANETNEQEEEANGNGNGNGSASNIDSGSKKLLNSSIVAAALTLQQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLATQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAAQQQQQQQQQSPMHSPAAATATATATAAAATNPATAATTAVAAQQQQQQQQPIAEANASSSSNCHDDDEDEDEEDASMQSNVAHADGDLDDDDMELEPEHVAAADAAAEQSARTESVADATQQAAAAAAAAAAADDDEEQDDEDVAAGVGDDVAVVAVEHEDEDEEASLNVSNNHNNNNNNTDSCSRKNNNNNKNSEAQHVALRDNNVNEQHVAHSAADDDCANNNTNTSNNNNNNNTNSNSEKRKKRSANNNNNNNNNNQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNNNNNNTTTSNSNNNNNNSSSNNNNNHSSSENNNDASVFKSTDLTTIKDDDDDEDNELDRSELRDGDDDEDMEITSSDAQHQQQQHAIGNNRHEDEDNDEEEVDEHDADMSNVAASAESNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAVSEEMPQQLAAAAAAATAAAAAAAVAAEAAATATATTATTAAEADVVAQVTVPVTVTVTAKSESETSRKETDTLQANLQPKVEIVDADDIDEANAVEQTLEEQLVNSYWRRGFETGTAAAAAATGNKTPTIYQNANAVQQQQQLLPPPPPPAPAAQQQQQQHFATQQQQQQQQQQQQQQQHYQQQQQQQQQQQLGPSSTVLLSQLVNSTFSHTNHSSCSNSKSTRLDAGHLPHQQQQQQQQHSQQQHSHHHNSSNSNSSSGAAGSDALNHHHLHQQQQQQQQQQQQQQQQQHAAHHHHGQLLHAHHLHHAGDSNSSSANSTPNSSSAATAQLAASIASTLNGSKSLLQQAAAAAVAVGDDASNGLTPSANAAAAAAAMAAHAQHAAALGAPQFLPSLPAFQFAAAAAAGQDARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRIAHILSEASSLMKSSAVAAQQQQQQQQEHQRRHVDDTHSNEDSKSPPQSCSSPFFKVEHQLKQHHQQQQQQQQAAQQQHAAAAQQQAAQQQQQLHVADVHVQREQREAAAAAAAVAVHHQQQQQQREQREQQQQQHRLRHEDLPHDKMARLYQELMARTPREATFQSFLLSPFFGGAAGMPGAASNHFPAAMAADENMRHAFEREIAKLQQQHQQQAAQQAQAQAQAQAQAQVQAANFPNFSSLMALQQQVLNGAQDLSLAGKEIKLNGQRSTLDQHSGGSSSTCSKDGTERSSDERSFALKSESGAVSVGGGGGGNTPAPTAAPAASTAANAVAVAAAVAGNASSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHAQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLAGKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQQQQQQQQAAAAQAAAQAQAQSVAQQQQQQQQVAAQQQQQQSVAQQQQQVAAQQAQLLHHQNMLLTSPGLPPQHAISLPAAAAVAAGAGAVVAGEKKPMLMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELEHNMSDSESLEGAGAGDSAATATAAAAANAVSEYEKALQKTALASAAAAAVYMSNAARSSRRKPAAPQWVNPAAASTPKAAGVAGVAGGVAVDGSERIINGVCVMQASDYGRDDGDSVKDGGAGGGSEAEQDEHAQLEIEQRFMEPEVRIKQEENDDEDEDEQLQQLQQQQHDESSARSDAGDVVGLGEQQLKVINEEKLRLVRVRRLSSNGDAEELCAAQQQQQAATAAAPAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01549472;
90% Identity
iTF_01549472;
80% Identity
iTF_01549472;