Zafr006483.1
Basic Information
- Insect
- Zaprionus africanus
- Gene Symbol
- grn
- Assembly
- GCA_018151435.1
- Location
- JAECXB010002206.1:10304641-10330343[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 3.4e-16 58.4 4.7 1 35 241 274 241 275 0.98 2 2 3.7e-19 1.2e-15 56.6 6.3 1 35 301 334 301 335 0.97
Sequence Information
- Coding Sequence
- ATGCTAAGCAGACGCGAAAGAGATCGCGGCCGAGGAACTCCTCAAGCATCCCGCATGCCCTCCTCACATGCCACGCCCCAAGTGTGCCGGCCGCACTTTCATACGCCGCTCAGTCCTTGGCTGACAAGTGAACACAAATCGTTTGCACCCGCCAGCGCTTGGGGCATGGGTCAATTCGCGTGCCCCCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAAGTGGGCCAGAGCCATCAGACAACGACGGCGGCGGGCCAGCACTCGTTTCCATTCCCACCGACACCGCCAAAGGACTCCACGCCCGATTCAGTACAAACCGGTCCATCTGAGTACCAGGCTGTCATGAACGCCTTCATGCACCAACAGGCCACGGGCTCTACCTCACTGACGGACGCCACGGCCGCTGTGCGGCATAGCATGGGCGCTGCAGCTGCCGCCGCGGCGCATCATCATCATCATCACAGTCACAGCCATCACAGTCACAGTCACGGTCACAGTGGTGCCTCGGCGGCCGCAGCGGCGGCGGCGGCGTCGGGTGCGACGGGCTCTGGACTGGGCGGCGGTGGCAGTGTCATGAGCGGCATGGGCAGCGGCATGAGCAGCGGCGGGCACAGCAGCTCCAGTGGAGCGGGCGGCGTTGCTGGTGGTGTTGGTGGTGTTGGCGGTCTCGACGTGAAGCCCGTGCGCACAAAGCCCCGGACAAGTGCTGAGGGTCGTGAGTGCGTGAATTGTGGCGCCACCTCCACGCCGCTGTGGCGACGCGACGGCACTGGACACTATCTGTGCAACGCCTGTGGCCTCTACTACAAAATGAACGGACAGAATCGGCCGCTGATCAAGCCAAAGCGAAGACTGACACTGCAGTCGCTGCAGAGCGCAGCCAAGCGGGCGGGCACATCCTGCGCCAATTGCAAGACCACAACCACAACCCTTTGGCGGCGCAACGCCAGCGGCGAGCCCGTCTGCAATGCCTGCGGATTATACTACAAGCTGCACAATGTCAATCGTCCACTCACCATGAAGAAGGAGGGCATACAGACGCGTAATCGCAAGCTCAGCTCCAAGTCAAAGAAGAAAAAGGGTCTGGGCGGCGGCTGTCTGCCAATTGGCGGACATCTTGGCATGGGCGACTTCAAGCCACTCGATCCATCCAAGGGCTTTGGCGGCGGCTTCTCGGCCTCAATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTATACCGGCGGCATGGGCGCCCTCGGTGCCTCTGGCGGACTGCAGGGTGGCTTCTCCACGGCGGGTTCGCTCGGTGGCGGCGTGGTGCCCCACTCGCAGCCCTATCACTTGGGCCTCAGCTCGATGGGCACCTGGCGCACTGACTATACGTGA
- Protein Sequence
- MLSRRERDRGRGTPQASRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWGMGQFACPQEPQVEHKLGQVGQSHQTTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDATAAVRHSMGAAAAAAAHHHHHHSHSHHSHSHGHSGASAAAAAAAASGATGSGLGGGGSVMSGMGSGMSSGGHSSSSGAGGVAGGVGGVGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASGGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01552824;
- 90% Identity
- -
- 80% Identity
- -