Zafr003742.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zaprionus africanus
Gene Symbol
-
Assembly
GCA_018151435.1
Location
JAECXB010002309.1:5550137-5554717[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.038 2.7 8.5 0.2 1 23 214 236 214 236 0.88
2 25 0.18 13 6.4 2.3 1 23 242 264 242 264 0.97
3 25 0.11 7.5 7.1 0.6 2 23 296 317 295 317 0.95
4 25 0.013 0.92 9.9 2.4 1 23 390 413 390 413 0.94
5 25 0.41 29 5.2 0.3 2 21 424 443 423 444 0.93
6 25 1.4 98 3.6 0.5 1 19 453 471 453 473 0.92
7 25 0.12 8.5 6.9 1.7 1 23 488 510 488 510 0.97
8 25 0.00048 0.033 14.5 1.5 1 23 589 612 589 612 0.93
9 25 0.24 17 6.0 3.7 1 23 650 673 650 673 0.97
10 25 7e-05 0.0048 17.1 0.2 2 23 703 724 702 724 0.97
11 25 2e-05 0.0014 18.8 1.9 1 23 730 752 730 752 0.99
12 25 0.017 1.2 9.6 1.1 1 23 892 915 892 915 0.94
13 25 0.18 13 6.4 2.1 1 21 922 942 922 943 0.90
14 25 0.074 5.2 7.6 0.3 1 23 952 975 952 975 0.91
15 25 2.9e-05 0.002 18.3 4.1 1 23 1001 1023 1001 1023 0.97
16 25 0.002 0.14 12.5 2.0 1 23 1030 1052 1030 1052 0.98
17 25 0.0093 0.65 10.4 0.0 2 21 1079 1098 1078 1099 0.93
18 25 0.011 0.75 10.2 3.9 1 23 1144 1167 1144 1167 0.96
19 25 0.0032 0.22 11.9 0.9 1 23 1204 1227 1204 1227 0.98
20 25 0.00027 0.019 15.3 4.4 1 23 1252 1275 1252 1275 0.98
21 25 6.3e-06 0.00044 20.4 0.2 2 23 1301 1322 1300 1322 0.95
22 25 8.3e-05 0.0058 16.9 4.3 1 23 1328 1350 1328 1350 0.99
23 25 2.1e-06 0.00015 21.9 2.3 1 23 1356 1378 1356 1378 0.98
24 25 5e-08 3.5e-06 27.0 2.4 1 23 1384 1406 1384 1406 0.99
25 25 0.0014 0.094 13.1 0.4 1 22 1412 1433 1412 1436 0.91

Sequence Information

Coding Sequence
ATGTTGCCGACAAATATCTGTCGCACTTGTGCGCAGCAAACGGATAACTTGCTGGCGCTTTCAACATGTATTGAGGCATACGTGAATAAAAGTATCAGCGATATGCTGCACGAATTGACTCACAATGATCCGATGGAACTAGCAGCAGATGATCTTCCGCAATATTTATGTGGCGACTGCTTGCTTAAGTTGCAAAATGCCTATGGGTTTGTGTTGCAAGTACGTCAAGTGCAGGAGCAACTGTTGCTTGAGCTACGCAAGGAATTGCTGGCACCACAATGTCTGGATGAGACACCCATCGACATGGCATTGCAGTCCATAAAGACCGAAGTGGACATCCCCTTTGATGAAGAAGATACTGAAATTGCTGTCCCTATGGACTCACAGTCATTTGTATGTGTGGCAGCCTTAAAATTGCAACCAGAAAGCGACAGTGAGAGTAATCAAGGCGATATCGATGCTGATGATGAAAATTATTCCCAACCAATGGAACGTAGGCGCAGTGCGCGTAAGCCCAAGCTTTCCATTGACAGCGGAGATGAATCAGCATCCGACAATTTAAACCCAATAACGACTAAGCGTCGGCGTGGCCGTCCAGCTCGTGTCACCAGAGATCAAACCATACCCACAGAGGGACGTTTTCCTTGCGAAGTATGCGGTAAAACGTTCTTGTGGTACCGCGACATGCAACGTCATGCCCGCATACACTACGAGGAGCCCTCGTTTGTGTGCGAACAATGTGGCAAGGGTTACCTACGTAAAGACAAATATATATGCCATCTGCGCATGCATGAAAAGCGCCGAGCCAAGAGTGAGGCTCTTACTCTTAGCCTGGAGTGGCGATTTGCTGAAAGGCTGTATAGTTCAGGGCGCCTTAAGCGCGTTGAATGTAAGCTGTGCGGCTTGCGATGCCAACGCATACTCGAGCTGCGCGAGCACATGTCTGGTCATATCAAAGCTGAAACATTGTCCGATCTTAGTGCCGACAGCGATGTGATCAGAGAACAGTTTCCCGGCCATCAAGACTTGATACAAATCAAGCAAATGATCTGTGCAGATATTGCTAAAGGACGAGATTATTTGGATAAATACTGTTCAGTGGTGAATGCTCATGGCTATGAGCTCTGCCTGAGTGACTCGGATGAAGAAATAAGTGGTATAACGCCTTATGAATGCCTATCCTGCAACGCCTCTTTTACTCGCAAACATCGTTTAATGAGTCACACATTGGAGACGCACACTCAATCTACAGATGAAGCCTCCTGGCTTCGCTGCAATGGCTGCCAAATCGGCTTTGTGTGTCCTAAGTTGCTGGAGCAGCATCAGCAATCCCAGTGTTACAGCCAATTCAAGCGCTATAGCTGTTCCGACTGTCCTGGAAAATTTATTTGGGAACAGAATCTTAAGCAACACGCCTGCTGCGAGGAGAAAAAGATTACTACTGGAGAGGAGCGTCGTCAGTTCAATTGCTGTCTGTGCGATGAGCAATTAGAAAGCATGACTTCTCTGAGAAGCCACTTGCTTACTCATCGGGATGGACGCACCGGCATAGATCCAAAACATACTTCTACCTTTCTTCGTTGCTTTTATCCCAATGGCCTCGATTGCAACTGGACAGAGCTAAGTGAAATCATTGCGAATGACTTTGAGGCTGGAGATTATGGAAGATATTTCAATGCTAGTACAACTGCTGGTCAGGAGCTGGACTTTTTAGACTCAGATACTGAGTTAAGCGATAGTGAGACAACATCACCCTCAGTTGTCCACACTTGTGATTTGTGTGGTGTCACCGCAACTCGCCTTAGCCACTTGCGGCGTCATCAGGAAGATGAACACAGTGACCTAAAGGCCCTTCCTCATGTCTGTGATGCATGTAATATGGGATTTGTTGCAGATTCGATACTTCAATGGCATCTTCGAACAGTTTGTTGCAAGCGACATGCAAAGTATCGTTGCACGGAGTGCAATCTTCACTTTGTATGGCAATCAAACCACGAGCGGCATTTGAAGTCGGTACACGGAAATGCGATTGCCGATGGAAAAGCTAAAGAGTTGGAGCGGCAAAGGCAAAGGAGCAGACGACAGCAAGAGTCATCAGTCAAGTTGCAGTGCGACGAGTGCGACAAGGTTTTCATTTGGCCAAAGGATCTCACGCGTCACAAGCGCATTCATCAAACGACAGACAAGTACGAGTGTTCGTATTGTGAACGAAAGTTTTTACGCAAGGATAACCTCAAATCACATTTGCGTGTGCATGGCGAGCACCAGCAGCCACAGGAGACGGCAAGTAAGACCAATAGCGACCCAGACACCGTGGTTATGCCAGCTGTGTGGAGCCAACTATGCCGTCCTAATGGCTGCAAGCAAATTAAATGCATGATTTGTTCATCGTACCACACTAAGATCTCCGATCTGCGAACTCATCTGATTTCACATCAGTTTGCGCTGCAGATTGTGGATGATCATCCCAAGTCAGAGCTCCTATATCCGGAACTGCGAAGTGATGATATGGACAGCGAACAATTGATTGAACGCATCCAGTATGATCTGGCTAAAGGGGATGAGCTTGAAAGATTCGTTTCGATCACGAATGAAGCAGGTATTGAGCTAAGCCTGGACAGTAGTGAAACCGATACGGATTCGGATTCGGCAGAAACAAATGGGAGTCAAACGTACGACTGTGATCTATGTCAATTGAAGGTGTCGCGCAAGCACCTTCTCTACGCACACCAGCTTGAGCAGCATGCCTGGCAAGAAGCTAGTCACGTCTGTAGCCATTGCCAGGCGAGATTCGTAAGTGATCAGTTACTGGATCATCATTATCGCTCTCTTTGTGGCAATCCCCTTAAGCGTTTCCTTTGCCGCAAATGTCCACTACGTTTTCGCTGGCGCGACAATCTTAAGTTGCACGTTGACGTGGCACATGCAGAAGTCGTTGCCGAGGAGCTGCCGAGTGGAGGTATCCAATTGAATGGGACAAGCTTGCTGCCGGTGGTCAGCTATGATTGTCACGAGTGTAATCGGAGCTTCAAAATGCAGAAGGATCTCACACGCCACAAATTGATGCATGCTCAGGAGTCGAGTATTTACCGCTGTCGCTGGTGTTTCAGACGCTTCTATCGCGAGGCAAACTATCTGCAGCACATCGAGCGGCATGGCATCACTGCTGCCCAGCTGCCCTACGCGGAGGCCCTGCTCAATGCAAGCGGCCATCCTAATGGACCAAAGTGCATTCAGTGCAAGGTGTGCAATGTTCAATTTTCCACCATTGCCGCTCTCCGCTCACATCTGTTGTCTGTGCCCAGTGGGACACACCACGAGATAGGGTCAATGCTGAACTACTCGATTACCAACAAGTTGGGCTATGAACTTCACCTGGAGGACTCGGAGACGGACGACGAGGCCAAGCCACCGAACACCCCAGCACACTACACTTGCGGCATGTGCCAGTTGCGTTGTGTGCGAAAATATGAACTGCATCAGCACCAGCAAGCGATGCATCGACTGGAATGGATAAAAGAGGGCTGTGATAAGTGCATCTTTAAGGGAGTTTCACCGGATCTCATTGCCTACCACAAACGAGTACAATGTGACAATTCGGAGAAGCAGTTCAAGTGTTCAACATGTGGCTTTAAGTTTATGTGGGAATCAAATTTGTTGCTGCACATGCAGCGGGAACACACAACTGACAACATACAGGCAACGGACGGCGAGACAGAAGCGAACCCGGTTGAAAGTACCAGCGGCCAGATCTTCAAGTGTGCTCAGTGTCCGCGGAAATACAATCGAAAGGATCGATTGACGGCTCATATGAAGAAGTGTCATGGACCAGGTGCGAATTGCTCAACAACAAAAACTCCAAAGGCCACATCAAGCGGTGCCAAACACAAGAACACATTCCTCTGTGCCTTTTGTGGAAAGGCGGTCAGCTCCTCGTCGAATCTTAATGTACACATACGACGCCACACTGGCGAGAAACCGTTTAAGTGTGACTTTTGTAACAAGGCTTTCCCACGCTCCTCCGATCTACAGTGCCATAGACGCACCCATACAGGCGAGCGACCCCACGTCTGCACCGTGTGCAAAAAGGGATTCGCTCGCTCGTACAAGCTGCAGCAGCACATGCGCATTCATAACGGGGAACGTCCCTACAAGTGCACCTATTGCGACAAGAGCTTCACACAGTCCAATGACCTGACCCTTCACATCCGTCGGCACACGGGCGAGCGACCTTATCAGTGCAACATCTGCAGCGAGCGGTTCATCCAGGGCACAGCCCTTAAGAACCATCGCCAGCAGAGTGGACATCGCGAAGACACCGAGGATCAAACCAAAAATAACTAA
Protein Sequence
MLPTNICRTCAQQTDNLLALSTCIEAYVNKSISDMLHELTHNDPMELAADDLPQYLCGDCLLKLQNAYGFVLQVRQVQEQLLLELRKELLAPQCLDETPIDMALQSIKTEVDIPFDEEDTEIAVPMDSQSFVCVAALKLQPESDSESNQGDIDADDENYSQPMERRRSARKPKLSIDSGDESASDNLNPITTKRRRGRPARVTRDQTIPTEGRFPCEVCGKTFLWYRDMQRHARIHYEEPSFVCEQCGKGYLRKDKYICHLRMHEKRRAKSEALTLSLEWRFAERLYSSGRLKRVECKLCGLRCQRILELREHMSGHIKAETLSDLSADSDVIREQFPGHQDLIQIKQMICADIAKGRDYLDKYCSVVNAHGYELCLSDSDEEISGITPYECLSCNASFTRKHRLMSHTLETHTQSTDEASWLRCNGCQIGFVCPKLLEQHQQSQCYSQFKRYSCSDCPGKFIWEQNLKQHACCEEKKITTGEERRQFNCCLCDEQLESMTSLRSHLLTHRDGRTGIDPKHTSTFLRCFYPNGLDCNWTELSEIIANDFEAGDYGRYFNASTTAGQELDFLDSDTELSDSETTSPSVVHTCDLCGVTATRLSHLRRHQEDEHSDLKALPHVCDACNMGFVADSILQWHLRTVCCKRHAKYRCTECNLHFVWQSNHERHLKSVHGNAIADGKAKELERQRQRSRRQQESSVKLQCDECDKVFIWPKDLTRHKRIHQTTDKYECSYCERKFLRKDNLKSHLRVHGEHQQPQETASKTNSDPDTVVMPAVWSQLCRPNGCKQIKCMICSSYHTKISDLRTHLISHQFALQIVDDHPKSELLYPELRSDDMDSEQLIERIQYDLAKGDELERFVSITNEAGIELSLDSSETDTDSDSAETNGSQTYDCDLCQLKVSRKHLLYAHQLEQHAWQEASHVCSHCQARFVSDQLLDHHYRSLCGNPLKRFLCRKCPLRFRWRDNLKLHVDVAHAEVVAEELPSGGIQLNGTSLLPVVSYDCHECNRSFKMQKDLTRHKLMHAQESSIYRCRWCFRRFYREANYLQHIERHGITAAQLPYAEALLNASGHPNGPKCIQCKVCNVQFSTIAALRSHLLSVPSGTHHEIGSMLNYSITNKLGYELHLEDSETDDEAKPPNTPAHYTCGMCQLRCVRKYELHQHQQAMHRLEWIKEGCDKCIFKGVSPDLIAYHKRVQCDNSEKQFKCSTCGFKFMWESNLLLHMQREHTTDNIQATDGETEANPVESTSGQIFKCAQCPRKYNRKDRLTAHMKKCHGPGANCSTTKTPKATSSGAKHKNTFLCAFCGKAVSSSSNLNVHIRRHTGEKPFKCDFCNKAFPRSSDLQCHRRTHTGERPHVCTVCKKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCNICSERFIQGTALKNHRQQSGHREDTEDQTKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01551132;
90% Identity
iTF_01554097;
80% Identity
-