Basic Information

Gene Symbol
-
Assembly
GCA_018151435.1
Location
JAECXB010002206.1:4824064-4826348[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.8e-11 4.6e-08 32.9 0.0 1 40 241 281 241 287 0.92
2 4 1.3e-08 1.2e-05 25.2 0.0 3 41 296 338 295 342 0.89
3 4 1.2e-08 1.1e-05 25.3 0.0 2 46 350 395 349 395 0.93
4 4 1.6e-10 1.5e-07 31.2 0.0 3 43 403 444 401 447 0.95

Sequence Information

Coding Sequence
ATGAGCGATGCGGATAGCCTAAGGCTTAATCAGCAGCAGCTGCTGGCGGAGATTTCGACGCTGCTGTCAGCCCACGCAGAGCAAAACGATGCAAATGCATTGACTTTGAATCAGGAGCTGCAGCGTCGTTTGGAGCAGATACGCGCGCGTATGTTGGCGCTACTGGAGCTTGTTCGTGCGCGCTATGCTCGCAATGAACAGATTCTCATACGCCGGCAAAAGCCACGATCCGTGAGACGGGCAACGAGGAGTCGCTCCAGTAGTGCCTTGGCCGATAGCTATGGCATTAGTGGAGCCGTACTGCGTGGTGGAACCTTTCGTTTCAAGGGCAATTTGTATTTTCGTGATGTGGACGGACGCAGTTGTCCCAACAATGAGGACTACAACAGGCGCTGCTCCACCGAAATGTTTCCCACAGATTTCGATATGCGTTCCAAACACGTTTGGACTGTGCTCGACAAGAAGAACGTCGTGATGGGCATTAAGCAACAGCTCTTGGATCATGCTTCCTATCAGAAACAGTCACTGCAACCTCTCAGTACGAAAAGAAAACGCAATGGGATTGATCTTCATATGCAGACGCTGGCCAACTTACTGAGTAACGCGGATAGCAGCTTTAGCATTGACTGGAATCAGATTAGCACATTGGATGTGGAACATCGTCATTCATCCTACAGCTGTGAGGCAATGTGGCTTGTCTACTTGCATCCGCAGCTTAGGCGCGATGCCTGGACACCGCAGGAGGATGATACGTTGATAAACGCAGCGAAGGCCAACAAAATGCAAAACTGGCAGCTCATTGCTGAGACAGTGCAACAACGTTCGGACTACCAATGCTTTATTCGCGTGCAGACCACGCTGCGAAATTATGTGGAACCCATTCCCAAATGGAGCCCTCAGGAAGACGAACGATTGCGCAGAATTGTTGAACTGAATACAGTGAACGGGGTAACAAACTGGTCCCAGGTGGTCGAGCACTTTCCGAACAGATCCCGATCCACATTAATTGGTCGTTACGTTTACTCCCTGCATCCCAGCATTAGTCACGAACCATTTACACCCAAAGAGGACTTGATGCTCTATGCTGCCTATGAGGAGTACAATGGCAAATTCAATTGCATTCCACGCAATTTGTTTCCCAACCGATCACTGGCTCAACTGCGCACCCGCTACCACAATGTGCTGGCACAGCGCAACAAGACAGACTCCTGGTCGGTGGAGGATGACAGCAAGTTGATGAGCTTTGTAACCACACACGGCACCTCACAGTGGTTGAACTGTGCCAACCATTTGGGCAATCATACGCGCACGAGTTGTCGCACACGATTTCTGGTTATCAAACGCTTTCTGGAGCAGAATCCAGATGCCACAATTGAGGATTTACCACGTCGCAAGACCAATAAAAAAACACCAGTTACTGCCGAGAATTGGGCACAACGTTTGCAGGAATGGAAAGAGGATCCAGGCTCTCTAACTGACCCAGATACGCAGCAACCAAAGGCAAAGAGAACCAAACGCGCAACTAGCCACGTCGGCACACTGCGTGGCACGGACATCCAAATCTATGAATACTTTAAGTATGCCTACAATCTCAGATTGCAATCGCCTGCGCCTCCAATGCCACTGCCAAAGGACGTGCGTAATCTGCACTTTGTGGCCAATGCACTGAGATTTAGGCCACCAGCAGTAACGAACACTACCAACCTTGTTCAGAGTGTTTCCCTACCAAAGCAACTGAATCGAACTTACAGCAATATGTTGCAGCAATTGCCACCACCTACGACGTCATGTGAGAATAGCGAACCTACGCTACTGCCACCCAGTTGGTCCACCATGATGGGTTTCCGTGCCATTTGCATATTGTCTGTGCATTGTCGCAACCAATCTGAGGCATTGAGAAAGTCACCCACCATCGACTATGATGAATCTCACGCAGATGTGCAACTGTTTCGGCAGCGATTACGCACACTTTTCTATCGCACCACGTTGTTGAGTCGCCTGGAGACTTCTGTGTTCGAACAGCTGCCGGCGGCATTGATGCAATCGCCACGGCCAGATGTTAATTATATAACCACGGAGAAGTCTCCAACAAAGAAGAGGAGCACAAAGACCTATAAGCTAAAGTTAGAGCCATGCGAAGCAGACATTAAAGAGGAATTGATCTAA
Protein Sequence
MSDADSLRLNQQQLLAEISTLLSAHAEQNDANALTLNQELQRRLEQIRARMLALLELVRARYARNEQILIRRQKPRSVRRATRSRSSSALADSYGISGAVLRGGTFRFKGNLYFRDVDGRSCPNNEDYNRRCSTEMFPTDFDMRSKHVWTVLDKKNVVMGIKQQLLDHASYQKQSLQPLSTKRKRNGIDLHMQTLANLLSNADSSFSIDWNQISTLDVEHRHSSYSCEAMWLVYLHPQLRRDAWTPQEDDTLINAAKANKMQNWQLIAETVQQRSDYQCFIRVQTTLRNYVEPIPKWSPQEDERLRRIVELNTVNGVTNWSQVVEHFPNRSRSTLIGRYVYSLHPSISHEPFTPKEDLMLYAAYEEYNGKFNCIPRNLFPNRSLAQLRTRYHNVLAQRNKTDSWSVEDDSKLMSFVTTHGTSQWLNCANHLGNHTRTSCRTRFLVIKRFLEQNPDATIEDLPRRKTNKKTPVTAENWAQRLQEWKEDPGSLTDPDTQQPKAKRTKRATSHVGTLRGTDIQIYEYFKYAYNLRLQSPAPPMPLPKDVRNLHFVANALRFRPPAVTNTTNLVQSVSLPKQLNRTYSNMLQQLPPPTTSCENSEPTLLPPSWSTMMGFRAICILSVHCRNQSEALRKSPTIDYDESHADVQLFRQRLRTLFYRTTLLSRLETSVFEQLPAALMQSPRPDVNYITTEKSPTKKRSTKTYKLKLEPCEADIKEELI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01550209;
90% Identity
iTF_01559690;
80% Identity
-