Yseq029851.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ypsolopha sequella
Gene Symbol
nfxl1
Assembly
GCA_934041175.1
Location
CAKOGU010001219.1:322739-325207[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1 4.1e+04 -8.2 4.3 15 18 91 94 91 95 0.52
2 19 1 4.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
3 19 0.032 1.3e+03 0.7 0.4 4 10 169 175 168 175 0.96
4 19 1.6e-07 0.0064 17.6 15.5 3 19 186 202 185 202 0.95
5 19 1.4e-06 0.056 14.6 12.3 1 19 237 255 237 255 0.93
6 19 1 4.1e+04 -4.9 2.0 6 10 280 284 279 284 0.84
7 19 6.8e-10 2.8e-05 25.2 11.0 1 19 290 308 290 308 0.99
8 19 5.6e-07 0.023 15.9 19.2 3 18 345 360 337 361 0.84
9 19 0.62 2.5e+04 -3.4 0.4 7 11 365 369 365 369 0.84
10 19 2.4e-07 0.0097 17.1 16.3 1 18 395 412 395 413 0.97
11 19 4e-10 1.6e-05 25.9 14.4 1 19 422 440 422 440 0.99
12 19 0.0015 61 4.9 8.6 9 19 488 498 479 498 0.72
13 19 0.00051 21 6.4 8.0 1 11 507 516 507 517 0.96
14 19 0.19 7.6e+03 -1.8 3.3 14 18 546 550 546 551 0.85
15 19 0.47 1.9e+04 -3.0 0.1 8 12 567 571 566 571 0.75
16 19 0.0001 4.2 8.6 2.8 1 11 587 597 587 598 0.97
17 19 0.52 2.1e+04 -3.2 1.3 15 18 612 615 611 616 0.83
18 19 0.0011 45 5.4 14.6 4 18 629 644 627 645 0.84
19 19 2.1e-06 0.085 14.1 10.6 1 16 686 700 686 705 0.86

Sequence Information

Coding Sequence
ATGTCCAGAAAATATCGAGATGCCGCTGCAAAACTTCAGAAAAACGTTCAGAAGCACCTTCTAGAAATGAAAGAGATTTCTTCTTCTGAAGATGAAGAGCCCTTCGAGTCGAGTGTCCTGGAAGGGGTCCTGCAGAGCTACAGGAACGGAGGAGGTGACGCCCAGATGCTCAAACGTACTAGGAATATGTTGGAAGAGTCCCTGAGCGGGCGGCCGGTAACCTGCCTAATTTGTATAGGATCCATCAAACGGCTCGACGCCATCTGGTCATGTCAACACTGCCATTCGTATTTCCACTTATCATGTATACAGAAATGGTCCAACGACAGTATAAGTCTCCGAAGCGAAGAGAACCACGGACCAATAGCTGTGATAAAGCCAAAGAAGATTGAGTGGTGTTGCCCTAAATGCCGTCATTCTTATTCTAAGGAAGAGATACCGCGAAAATATTACTGCTATTGTGGTAAAGTGAACGATCCTCCTTTCCATCCTTGGCTGATACCTCACTCGTGCGGGGAGGTATGTCAGAAGAGGTTATCAGGGGGCGACAACTGTAAGCATCGCTGTCTCTTGCTGTGCCATCCTGGCCCCTGTCCCCCGTGTCCTCAGATGGTGAATGGAGTGTGTTATTGTGAGAAAGAGAGAAAGAAAGTGCGATGCAGCATATCTAAATGGTCTTGTGGTCAACAGTGCAAGAGACTATTATCATGCAATTCACATAAGTGTGAAAGCCTCTGCCATGAAAGCACCTGTCCTCCATGTAGTTATACAAGCATGCAGCCATGTCAGTGCGGTTCTGAGAAGTTGAAACGGCCCTGTACTGATCCATTTTGGCAATGCCAGAAGCGCTGCAATCAACCATACTCTTGTGGATATCACAAGTGTGAAAAAGTTTGTCATTTCGGAGAATGTGGCTCATGTCCAAACTCTGGTATGAGATCTTGTCCATGTGGGGCTAATCAGCGATATGTGGAGTGTCCAGATGTCATGGAGACATGCCTAGAAACTTGTGGAAAAAAGCATGAAGATTGTCAACATAGTTGTCCAGAGAAATGTCATAAAGGACCATGCCCACCTTGTCTCGTATTAGTAGAGAAGAAGTGTCATTGCTCCACCCATACAAAGTCCTTGCCTTGTAGCAGAGAGTTCAGATGTGAGACGAAGTGTCGAGGAGTTAGAGACTGTGGGAAACATGCTTGTGCCAGGAAATGCTGCAACGGTAACTGCCCACCGTGTGAAAAGATTTGTGACAAACCACTACAATGTGGTCGACATAAATGCACCACTGTTTGCCATCGTGGCCCCTGCTACCCATGCCCGAGAGAATCGCAAGTTACCTGCCGCTGCAAAGAAACATCCATCACTGTCCCATGCGGTAGGGAAAGACATACCAAGCCACCCAAGTGTGCCTTATCTTGCAAGATAAAATACAAATGTGGTCACACCACTGAAAATGTACATTCCTGCCACTTTGGTGACTGTCCCTCATGCAAGGCCATCTGTGACAAACTGTACAACTGTGGCCACAGGTGTCCATCAACTTGTCATCAATATGTTGCAGTAACTTTCAAGCAAATAGAGAAACCTGCGACACCATGGGAAGTCCAGCCACCCAAAATGAAGATCATGACATTAGAATGTCCTCCTTGTGAGTTTCCTGTCCCTGTCACTTGTTTTGGAGAACACGAGACAGCAAACCAGGCTTGCCACACAGCAGCTCGGTATCCTTGCGGAAGAAACTGTGGAAAACCACTTCCATGTGGAAATCATGAATGTTTCCTGATGTGTCATCTTTCAAAGCCTGAAGCCGATTACCCAAATGTGCCTTCGACTTGTGAACCTTGTGACAGAGAGTGCTCGGTTCCACGTCCAGAAAAATGTGTTCATAACTGCCCAAAAGAAGCCTGCCATCCCGGTGTTTGTCCTCCTTGTGAAACTGTTAAAAGAATTACCTGCCACTGTGGATTAAATGAGCTTTACTTACGCTGCTGCGATTTAGGTTCAGCAACAGAAGAAACTCTGTCTTGCAAGCAGCAATGTCCTAGGAACATGCCGTGTGGCCATCGCTGCAAAAACATTTGTCACTCTGGATTGTGTCTGGGACAAGTTTGCACCAAGAAGACGAAAGTGTACTGTCCCTGCATTAATTTGAAAAAGGAACTGCCGTGTAATTTAGTACAGGAAGGGAATAAGGTTGAGTGTGACGATAACTGCGAGGCTAAAAAACTGGCATCCAAATTAGAGAGAGAAAAAGAGGAATTGAGACAAAAAGAATTAGAAGAAGAGAGAAATAGAAAGGAGTTGGCAGAGTATGAGCGGAAAATGAGCGGGAAAAGGAGAAAACATAACTATAAAAAGGTTGTTGAAAATAAAGATGAAAGAAGTGTTCTGCAAAAGTATTGGGTTCCAGTGACGTCTGTTTTCGTGTTTGTTACGGCTACTTTTTATTACATTTTATATGTTAATTAG
Protein Sequence
MSRKYRDAAAKLQKNVQKHLLEMKEISSSEDEEPFESSVLEGVLQSYRNGGGDAQMLKRTRNMLEESLSGRPVTCLICIGSIKRLDAIWSCQHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVIKPKKIEWCCPKCRHSYSKEEIPRKYYCYCGKVNDPPFHPWLIPHSCGEVCQKRLSGGDNCKHRCLLLCHPGPCPPCPQMVNGVCYCEKERKKVRCSISKWSCGQQCKRLLSCNSHKCESLCHESTCPPCSYTSMQPCQCGSEKLKRPCTDPFWQCQKRCNQPYSCGYHKCEKVCHFGECGSCPNSGMRSCPCGANQRYVECPDVMETCLETCGKKHEDCQHSCPEKCHKGPCPPCLVLVEKKCHCSTHTKSLPCSREFRCETKCRGVRDCGKHACARKCCNGNCPPCEKICDKPLQCGRHKCTTVCHRGPCYPCPRESQVTCRCKETSITVPCGRERHTKPPKCALSCKIKYKCGHTTENVHSCHFGDCPSCKAICDKLYNCGHRCPSTCHQYVAVTFKQIEKPATPWEVQPPKMKIMTLECPPCEFPVPVTCFGEHETANQACHTAARYPCGRNCGKPLPCGNHECFLMCHLSKPEADYPNVPSTCEPCDRECSVPRPEKCVHNCPKEACHPGVCPPCETVKRITCHCGLNELYLRCCDLGSATEETLSCKQQCPRNMPCGHRCKNICHSGLCLGQVCTKKTKVYCPCINLKKELPCNLVQEGNKVECDDNCEAKKLASKLEREKEELRQKELEEERNRKELAEYERKMSGKRRKHNYKKVVENKDERSVLQKYWVPVTSVFVFVTATFYYILYVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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