Yseq035046.1
Basic Information
- Insect
- Ypsolopha sequella
- Gene Symbol
- Zfy2
- Assembly
- GCA_934041175.1
- Location
- CAKOGU010001854.1:71124-101834[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.021 2 10.2 0.3 3 23 292 313 290 313 0.91 2 15 0.015 1.5 10.6 0.3 3 23 332 353 330 353 0.91 3 15 0.0024 0.23 13.1 0.4 3 23 412 433 410 433 0.91 4 15 0.015 1.5 10.6 0.3 3 23 452 473 450 473 0.91 5 15 0.021 2 10.2 0.3 3 23 492 513 490 513 0.91 6 15 0.063 6 8.7 0.2 3 23 532 553 530 553 0.90 7 15 0.034 3.3 9.5 3.7 1 23 560 582 560 582 0.97 8 15 0.15 14 7.5 0.2 2 20 631 649 631 651 0.94 9 15 0.018 1.7 10.4 0.9 1 23 655 677 655 677 0.98 10 15 0.012 1.1 11.0 1.5 2 21 688 707 687 712 0.92 11 15 6.6e-05 0.0062 18.1 0.3 1 23 720 743 720 743 0.93 12 15 5.4e-05 0.0051 18.3 0.9 1 23 749 772 749 772 0.97 13 15 2.8e-05 0.0026 19.2 2.5 3 23 784 804 783 804 0.98 14 15 0.48 46 5.9 5.9 1 19 810 828 810 833 0.91 15 15 9.5e-06 0.0009 20.7 0.9 1 23 858 881 858 881 0.93
Sequence Information
- Coding Sequence
- ATGAATACAATTTGTGCATTTTGTTTGTCTAATGACAGAAACCTGACCTTAATTCATGAAAAGTACTGGAAAATTGTCGATTCCTGCATTGCTTCAGAAGACGAAAAATTAGAGACTTTGCCAGTCACAACATCAAAGCTGTACAGAACACATATAGAAATAGTAGGGACTGGGCCAAATTTTGAAGAAATTGATATAGAAGATGTATCAGACAGTTTAAACATTAGGCCAAAGTGTGAAGAAACTGAAACAGAAGATGTGGCAGACACTACAGATACAGGGTTTATATATGAAGAAACTGAAATGGTAGACCTGACAAACACTGATCCAAAATATGAAAACACTGAGGCACATGATGCGACATACACTGAAACAGACCACGACATGGCATACACTGTAGACACGGGGCCAATTTATGAAGATACTGGCACAGAAGATTTGACGGACACTTGGGATGTCAAGGTGGAAAATGATCAACTCCAGGTTCCCGGAGACGTTCAAAGTACAAATGATGCAGCAAACGAAAGTTTCTTTAAATTAGAAACCTCTTCACCCGTGGATGATGAATATAATATCATAAACTTCGTGGAGCCAGCTGGTGATGATGTTGACGATGATGATAAAGACGTATTCGATAATATAGATATTGATGATAACGTAATTGAAGAGTATTTAACAGAGGAGCAACTACCTCCTGAGATAGAACCTTCAAAAGTGATTGAGGAAAATATTATATCAAAACCGAAGGACAACGAGAAGCCTCCACCAGAACTAAAATTCACCGTACAGTGGGTGTCGAAAGAGCAAGCACAAGTATGGTACACGAGCGAGCGCGAGCAGGATAGACTCGAATCCCCCACACACACGCACCTCTGTGACAAGTGTCAGAAGGGGTTCGCTGGTGAGCAGGAGCTGCAGGCGCATGTCGAGTTGCGTCATAGTGAGGTGAGTGTAGGACAGGAGAGAGTCGCGTCCCGCACACACACGCACCTCTGTGACAAGTGTCAGAGGGTGTTCGCTGGTGAGCAGGAGCTGCAGGCGCATGTCGAGTTGCGTCATAGTGAGGTGAGTGTAGGACAGGAGAGAGTCGCGTCCCACTCACATACGCACATCTGTGACAAGTATCAGAGGGTGTTCGTTGGTGAGCAGGAGCTGCAGGCGCATGTCGAGTTGCGTCATAGTGAGGTGAGTGTAGGACAGGAGAGAGTCGCGTCCCCCACACACACGCACCTCTGTGACAAGTGTCAGAGGGTGTTCGCTAGTGAGCAGGAGCTGCAGGCGCATGTCGAGTTGCGTCATAGTGAGGTGAGTGTAGGACAGGAGAGAGTCGCGTCCCGCACACACACGCACCTCTGTGACAAGTGTCAGAGGGTGTTCGCTGGTGAGCAGGAGCTGCAGGCGCATGTCGAGTTGCGTCATAGTGAGGTGAGTATAGGACAAGAGAGACTCGCGTCCCGCACACACACGCACCTCTGTGACAAGTGTCAGAAGGGGTTCGCTGGTGAGCAGGAGCTGCAGGCGCATGTCGAGTTGCGTCATAGTGAGGTGAGTATAGGACAAGAGAGACTCGCGTCCCGCACACACACGCACCTCTGTGGCAAGTGTCAGAGGGTGTTCGCTGCTGAGCAGGAGCTGCAGGCGCATGTCGAGTTGCGTCATAGTGAGACCGCCGGAATTTACATTTGTCACATGTGTCAGTACAGATTCGAGAGCGAACGTTTTTATAGAAGTCACTTAGAGAGTCACTTCTTACTTCACAAATGTAGGAAGTGCAGTTATGAAACTAGAATTCCTAGAGAAATGCACGCGCACTGCAAGACGGAGCACGTCGATGAAGAAGCACAACGAAGAAAGCAAGAAAAGAAGAGCAAGGAGGATCAAAAGGCGAGGACGTGTACAAGATGTAAAAATGAATTTCAGTCCCCATCTGAACTGGCCACGCACCTGTCTGGTTGCACTACGTACAATTGTTCCGAATGTGACGCGAGCTATGGAAATTTTAACAGTTACTACTTGCACCTCAAGACACACCCGGAGACCAATAGCGAAGAGACGGAGATGTATTGCGAGAAATGCGACACTCAGTTTAAGAGCATACAGAGCTACAGGAAACATATGACTTCCAGCTTACGACACGTCTCCAGAGATGATTACAGATATCAATGCGAATATTGCGACATGAAGTACCCGGATGGGAGCAACTTGAGGAAACACATCGCCTTTGTACATTTGAAGAAGGCAAGGTTCCAATGCGAGATCTGTCCCAAGTTGTACAATAGACGTAGCGAGTACCAGCGACACCTCGCCAAGCAGCACAACCTTGGTGAACATGAGGAGCTCAACAAGATTTGCGACAAGTGCGGCAAGACTTTCTATTCTATGTGTGACCTGAAGGATCACATTCGAACGCACACGGGAGAGAAGCCGTATAAATGTCAATTCTGTAACGCGGCGTTCACTCATTCAAGCAGCATGTACTCACATTGCAAATTTGTGCACAAGAAGAAAATCCACACGGGCAAAGCTACGGTCAACAAGGGGGTGACATTTGAAGATATCGAAACTAAAAAACACGTCTGTGACGAGTGCGGCAAAAGCTACGTACACGCGTACAATCTAAGAGACCATATCGACTACGTTCACAAGGGACGTACTGACTACGTCTGCAAGTTCTGTAATAAGGGGCTCTACCGCGTAATTCTCATTTGTATCAACTTCAAGCAAATGCATGCGAAATTCAACGCGTGCAAAAGAGATGGCATGTTAGGCGGGCGTCGTCGCACGCACGTCAAATTTCAATCTCAAGTTGATGTTGATGAAAATGAGAATTACGCGGTAGACCCACAGGCCAGATACGCGTGCCAATTTGAAGTGCTCCAAATTAGATAA
- Protein Sequence
- MNTICAFCLSNDRNLTLIHEKYWKIVDSCIASEDEKLETLPVTTSKLYRTHIEIVGTGPNFEEIDIEDVSDSLNIRPKCEETETEDVADTTDTGFIYEETEMVDLTNTDPKYENTEAHDATYTETDHDMAYTVDTGPIYEDTGTEDLTDTWDVKVENDQLQVPGDVQSTNDAANESFFKLETSSPVDDEYNIINFVEPAGDDVDDDDKDVFDNIDIDDNVIEEYLTEEQLPPEIEPSKVIEENIISKPKDNEKPPPELKFTVQWVSKEQAQVWYTSEREQDRLESPTHTHLCDKCQKGFAGEQELQAHVELRHSEVSVGQERVASRTHTHLCDKCQRVFAGEQELQAHVELRHSEVSVGQERVASHSHTHICDKYQRVFVGEQELQAHVELRHSEVSVGQERVASPTHTHLCDKCQRVFASEQELQAHVELRHSEVSVGQERVASRTHTHLCDKCQRVFAGEQELQAHVELRHSEVSIGQERLASRTHTHLCDKCQKGFAGEQELQAHVELRHSEVSIGQERLASRTHTHLCGKCQRVFAAEQELQAHVELRHSETAGIYICHMCQYRFESERFYRSHLESHFLLHKCRKCSYETRIPREMHAHCKTEHVDEEAQRRKQEKKSKEDQKARTCTRCKNEFQSPSELATHLSGCTTYNCSECDASYGNFNSYYLHLKTHPETNSEETEMYCEKCDTQFKSIQSYRKHMTSSLRHVSRDDYRYQCEYCDMKYPDGSNLRKHIAFVHLKKARFQCEICPKLYNRRSEYQRHLAKQHNLGEHEELNKICDKCGKTFYSMCDLKDHIRTHTGEKPYKCQFCNAAFTHSSSMYSHCKFVHKKKIHTGKATVNKGVTFEDIETKKHVCDECGKSYVHAYNLRDHIDYVHKGRTDYVCKFCNKGLYRVILICINFKQMHAKFNACKRDGMLGGRRRTHVKFQSQVDVDENENYAVDPQARYACQFEVLQIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -