Basic Information

Insect: Ypsolopha sequella
Gene Symbol: -
Assembly: GCA_934041175.1
Location: CAKOGU010001413.1:678560-699422[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.12 12 7.8 0.4 1 23 343 367 343 367 0.97

2 28 0.042 4 9.2 1.8 1 23 373 396 373 396 0.97

3 28 0.15 14 7.5 0.8 2 23 412 433 411 433 0.96

4 28 1.6 1.6e+02 4.2 0.3 1 23 438 460 438 460 0.96

5 28 0.021 2 10.2 9.5 2 23 518 539 517 539 0.97

6 28 0.00073 0.069 14.8 1.1 1 23 545 568 545 568 0.98

7 28 0.1 9.5 8.0 0.4 2 23 597 618 596 618 0.96

8 28 0.0015 0.14 13.8 0.8 1 23 624 647 624 647 0.92

9 28 0.023 2.2 10.0 2.4 1 23 661 683 661 683 0.95

10 28 0.64 61 5.5 5.7 1 23 689 711 689 711 0.99

11 28 0.069 6.5 8.6 0.5 1 21 751 771 751 772 0.94

12 28 9.8 9.3e+02 1.8 2.3 3 23 937 957 935 958 0.94

13 28 0.021 2 10.1 0.6 1 21 965 985 965 986 0.95

14 28 0.037 3.5 9.4 2.3 2 23 994 1015 993 1015 0.97

15 28 0.022 2.1 10.1 1.8 1 23 1018 1040 1018 1040 0.97

16 28 0.00015 0.015 16.9 0.6 2 23 1046 1067 1045 1067 0.97

17 28 0.00029 0.028 16.0 1.5 2 23 1074 1096 1073 1096 0.96

18 28 5.5 5.2e+02 2.6 3.6 1 23 1246 1268 1246 1269 0.95

19 28 0.16 15 7.4 0.2 1 21 1276 1296 1276 1297 0.94

20 28 0.01 0.96 11.2 1.8 1 23 1329 1351 1329 1351 0.98

21 28 2.5 2.3e+02 3.7 5.2 1 23 1385 1407 1385 1407 0.97

22 28 0.001 0.099 14.3 1.9 1 23 1433 1456 1433 1456 0.98

23 28 0.0051 0.49 12.1 0.5 1 23 1474 1497 1474 1497 0.97

24 28 0.0019 0.18 13.4 1.2 2 23 1516 1538 1515 1538 0.97

25 28 0.00057 0.054 15.1 0.3 1 23 1552 1575 1552 1575 0.97

26 28 0.24 23 6.8 0.4 1 23 1595 1618 1595 1618 0.97

27 28 0.0076 0.72 11.6 0.3 1 23 1636 1659 1636 1659 0.96

28 28 0.0047 0.45 12.2 0.1 1 23 1672 1695 1672 1695 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.12	12	7.8	0.4	1	23	343	367	343	367	0.97
2	28	0.042	4	9.2	1.8	1	23	373	396	373	396	0.97
3	28	0.15	14	7.5	0.8	2	23	412	433	411	433	0.96
4	28	1.6	1.6e+02	4.2	0.3	1	23	438	460	438	460	0.96
5	28	0.021	2	10.2	9.5	2	23	518	539	517	539	0.97
6	28	0.00073	0.069	14.8	1.1	1	23	545	568	545	568	0.98
7	28	0.1	9.5	8.0	0.4	2	23	597	618	596	618	0.96
8	28	0.0015	0.14	13.8	0.8	1	23	624	647	624	647	0.92
9	28	0.023	2.2	10.0	2.4	1	23	661	683	661	683	0.95
10	28	0.64	61	5.5	5.7	1	23	689	711	689	711	0.99
11	28	0.069	6.5	8.6	0.5	1	21	751	771	751	772	0.94
12	28	9.8	9.3e+02	1.8	2.3	3	23	937	957	935	958	0.94
13	28	0.021	2	10.1	0.6	1	21	965	985	965	986	0.95
14	28	0.037	3.5	9.4	2.3	2	23	994	1015	993	1015	0.97
15	28	0.022	2.1	10.1	1.8	1	23	1018	1040	1018	1040	0.97
16	28	0.00015	0.015	16.9	0.6	2	23	1046	1067	1045	1067	0.97
17	28	0.00029	0.028	16.0	1.5	2	23	1074	1096	1073	1096	0.96
18	28	5.5	5.2e+02	2.6	3.6	1	23	1246	1268	1246	1269	0.95
19	28	0.16	15	7.4	0.2	1	21	1276	1296	1276	1297	0.94
20	28	0.01	0.96	11.2	1.8	1	23	1329	1351	1329	1351	0.98
21	28	2.5	2.3e+02	3.7	5.2	1	23	1385	1407	1385	1407	0.97
22	28	0.001	0.099	14.3	1.9	1	23	1433	1456	1433	1456	0.98
23	28	0.0051	0.49	12.1	0.5	1	23	1474	1497	1474	1497	0.97
24	28	0.0019	0.18	13.4	1.2	2	23	1516	1538	1515	1538	0.97
25	28	0.00057	0.054	15.1	0.3	1	23	1552	1575	1552	1575	0.97
26	28	0.24	23	6.8	0.4	1	23	1595	1618	1595	1618	0.97
27	28	0.0076	0.72	11.6	0.3	1	23	1636	1659	1636	1659	0.96
28	28	0.0047	0.45	12.2	0.1	1	23	1672	1695	1672	1695	0.98

Sequence Information

Coding Sequence: ATGTTGAAAATTGCTGAATCCATGGGTGAAATTATAGACAGCAATGATGAAAAACTACAGTTACTTGTAAAAGCGACACAGCCTTCAGAGGAACCTAGCTGCATACACAGTAGCTGCCTGCTGTATGGATCATCTGCAACACCAGCTTCGCCAGATACTCCGCCTATACTGACCCCTCAGGATCTACATACGTCTGTGGGCCTCTCACCATCTCAGAGTCCCCTTGGCATGACTATGACACCCCCCGCACAGGAGCACGCCTCTGTCACTGGTCTGAGAGTATCCCTAGGCTCTCCTGAAGTGCCAGTGCCTCCGTCCGAGTCCGTAGGTGAGGACCGTCAGCTTTACCAGCGTCCTAAAACACCAGTCTCCACACCTGAACCTAAGAGCAAGGTTACTCGTCGAAAGCAACGTCGCCGTTCTGCTCGCCTTCGTCGTGGCTCCGGTCATGGCGCAGAACCATCATCCACTCCTGCAGTGAAAACCGCGTCAGACCCTGCACCTACGTCTGACGCGCTGCCCACGCCGAGCTCTTCCCTTCAGCCTTCTGAGCCCTTGTCGGTTGCTGCGTCAGCGACTGAATCCTCGGCGTCGCAAGGACATAATACTGTTGTGTTTACAGACTCTATTGGAAAAAACTTAGGGCCCTTATTAGGAAATAAACTTATGCAGAAAGTGACCAATATTTGTATGCCAGGTGCATCTTTCATACAAATTGTAGAGCGTTTGCTCAAAATGGAATATCAATTAAATACTACAATTGTTCTGCTGATAGGAAATAGTACAGCAAAGATGTCAGAGATAGATGCAGATGGTGATTTCACAAGGGTTTGGGTGAAAACCGAAATCAAATATGAACCTCTGGACTCCGATGAGATCAATGTGTTTGCTGGTGAAGACAATGTAGAGGAGAATGTTCTTGGAGATGATGACCCTATGAAATATTTTCAAACAGAAGTTGAACTTGATGTGAAGGATGAGAGCGACCCAAATTTCGTTAAAGTGAGAAAAACCCACAAAAGGAAATTTAAATGCCCAGTTTCAGCATGTAATTATGTAGCTGCACATAGGCACGCTTTGAAAGCACACGTCGCGACACATTCAAAGGAAAAACCGTATAATTGTGGGTTCTGTGAATACAGCACTAAATTTCTTACCGCTTTGAAACGCCATGAAAAGACACAGCACAGAGTCAAAAACGAATCGCATTTGAAGGAGAAACTAAAAGAGTTGAAATGCGAGTCATGTGATTATACAACTAGCATTAAGAATAATATGAAAAGTCACGTCGAATCTCATTACAACGATTATTTCATATGTAACATGTGTGAATATGAAACCGTATTGGAGAATATGTTCAAAATGCACATGGAGCAACACGAAGCAGAGAAAAATGAAATTGCGGGCGATGACAGTAAAGAAAATATCACTGAAGCCGTGATGAAGATTGCTCGAAGTATAAAAACAGAAAGCATAACGACTTCAACTCAAGAAACGCTGCAACCAAAAAATGAAACTAAAATGGCGACCACACTTAAGACCACTGAACTGAAATGTCCTCATTGTGACTACAAGTCTTCGTACAGACATCACTTTAAAACTCATTTGAGGAAACACTCGAACGATAAGGATTTCAAATGTGATTTGTGCGAATATGAGACCAAATATCCAACCGCTTTGAGGAGGCATCTGAAGACTCAGCACACTGGTGACAAGATAAAAAAGCGCTCAGCGGATAAGGTGGCATCAACTAAAATGAGGAAACGAATGCACTCAGACAAAATCTTATCGTGTTCTCAGTGCGACTATTCTACTAAATGGAGAAACGCATTACTTATCCACATCAGAAAACACAATGATGAAAAACCTTTCCTTTGCGATCAATGCGATTATTCCACATACTATTCTTCAAGTTTACAAAGACACATAATACAGAATCACAGACACAGCGATGATCCAAACAACGAAAACCACAAACCTCATATTTGTGAAATATGCGGCTTCAGAAGTCTGTTTAAAGTAAATTTAAAGAATCACATGAGAAAGCACAGCGTCGATAAACAATTTAAATGTCAGCATTGTAGTTATGCAACAGCTTACAGAAATTGCATAGACAAACATATGAGAATGCACGATAGGAAAGACCGTAAAATTGCGTTTCAGTGTGAGAAGTGTCCATTTTACACGCAATTCGAAGGCAAGATGTCCCTTCACTTGGTCAAAATACATAAGCAGCAACTGGAAAATGGACACCGATGTCCATACTGCGACTTTTCTACTACTATAAAGTGGAGACTAAACATCCATATACAAAGAAGTCGTCAAGAAGAACCTATAAAATGTAAATACTGCGACTTTCAGACTGAATACAAGTGCGAAGGAAAAATCCATAAAATGAAACATTTCCCAAACGATATTCCTCACGAATACGTACAGGCTAAAGTTGAGAAAAATATTTTAGATAATGGTTCTAAAAATCTGGAAGCGGTTGTTAACAGTGCTGATGCTAATCTTCAGGGTGGCGCTAATTTAGTTTCTTCAGTGAACGAGGCTAGCAAAATAATTCATCAAAACCTCAATTCTAAAATGCTTCAAAATATTCTCCCCTCCAATTCCAAACACAGTGCAGATACTTTAGTAGAAAGAGCTCAAAACAAAGCAACAAAAAGAAAAAAGACTGCTGACGCTGAATTCCAAACCGGCTTAAAAAATCAAACCAATGATTTTCGTAACCAACTTGACATTAGCACAATAAATTGGGATAAAATCCCAGTTTTAAAAAGCGCGGATAGTGAGAAACCGTTTGGTTGCTACAACTGTTCTTACACAGCAAGGTTCAAAGCAGCTGTCCAGAGGCACTTTCAAAGACACCACGGCGACAAAACACGCCCATACAAATGTTCTTATTGCGATTTCGCTGGCTCCACCAAAGATTCCTTAGGCACACACACTAAGAAAAGTAAATTAGACCACGTTAAAACTTGTCTCGAGTGCGATTTCTCCTCTACATATAAATGTCAACTCGTGGCTCATCAAAAAATACATTACAAATACAGATGTGCCGTCTGTACTTACTCTTGTAAGCAAAAAGTGACTTTAGATGCTCATTACTTGCTTCATCAGGGGACAGCATTGAAATGTAAGGTCTGTGATTATGTAACTGTTAAAAGATCTAGCTTGATTTACCATATGATGACACATACTGGCATTAGACCGTTACAGTGTCGATACTGCGACTATTCCTCAGGCAGACGTGACTTACTCAGAAACCATATGAGGAGATTTCATGGTGATGTAATACATAATATTGAGAATCAACCAGAGATTGTTGAATCTGTAGAAAATGGTAAAAATGAAGAACCAAATGTTATTGAAATTGAAATCCCAAATGATACTCCCGTGATGGATGATTCTGATAACGAATATGACACTGCCAAAACTGAGGAAAATGTATCAGAATATTTTTCTCCTAATCGTTCTGAGCCATATGAAAATTATGCTGCAGCTTTTGAAAATGAAGAGGAGAAAATAGCTCATCAAAATTTTGAACATTTTCTACCGACTTACGCTGTAGTGGAACAACCTCGGAGCAATGAGCAAACGCAAGAAAAAGTCACCGAGGCAAAAGTCAATGTTATCGAGAACCAAACTTATGAAATTCCTATCATTGAGAGTAACATATTGAATTGGGAGAGAATCCCAGTGAGAATAAACAAGAAAAATCCAGAGAAGCCATTCGAATGTTACAATTGTTCTTACGCTTCCAAATTCAGAGGAGCCATCAGAAAACATTTCCAGCGCCACCACGGGAATAAGGCACGCCCATACAAATGTCCAAACTGCGATTTTGCTGGCTCCACAAAAGATTCCATTGGCAAACACAGAAACAGAGGCATTTTGGAGACTGCTAAGACTTGCAAAGACTGCGACTTTTCCACCTTATATCAGTGCGAGTATGTTATGCATCAGAAAATTCATTACAAATACAGATGTACCATGTGTACCTACGCTTGCGTAATGAAGTCTACATTAGAAGATCACTATTTGATTCACGAAGGAGGCTTGTTGAAATGTAGCTACTGTAGTTTTGAAACTAAATCGAAATACTATTTGAAGTGCCACGAGACTCAGCACAGAGAGGGTAGAAGGAAATATGTATGCGATCATTGTAATTATTCTACACACACGCGATCTATAATAACTACTCATTTAAAGAAGCACTTTGAAAGAAGCAATGAAAACAGTTCTTCTACTAAAAAACCAGAAAAACCAGCGGCTAATTCCGTACTCAAGCCATTCAAGTGCAAATACTGTCCATATTCCTCATCCGGAAAAGTTTGGCTTCGGAAGCATGTGAAAAAGTTTCATATAGATGATGAGAATGCCACAGAAAATCAATTAGAGTCGTCAGAAAAGCCATTCAAGTGCCATCTCTGCCCGTTCGTTTCATCCGGAAGAGGTTGGCTCAATAATCATTTGAAGATTGTACATAATCTTCATGATTATATAATTGAAGCTCAATCAATACCAGTAGAAAAGCCTTTAAAATGCCAAAACTGCTCTTATGCAACAACTGGCAAATCTTGGCTCAGGAATCATATCAGGAAGTTTCACAATAACGAACCGAAAATGAGAAAACCAGCAGAAAAGAATTTCAAATGCCCATACTGCTCTTACTCTTCAACCGGCAAAGGTTGGCTTAAAAATCACGTGAAGGTTGTTCATAAAATTGTCGAAAATAACGAAATCCCTGAAAGTCAACCAGAATTCATCGATCAGCCTTTTAAATGTTTATATTGTCCCTATTCTACAGCTGCCCAGATTCGGCTCGAGAATCACGTTCAAAGATTCCACGTTGAAGACCCCAATGGGACAGAAAACTCCTCGGAATCACCAGAAAAGCCGTTCAAGTGTCAATACTGCAATTATTCCGCTGCCGGACAGGCGTGGCTTCAGAATCACATAGACAAGTATCATACAGCTGAAACTCAATCGGGTTCCGTAGAAAAGTGTTTTAAATGTGAACTTTGCCCTTATGCGGCGTCTGGGAAGGCGTGGCTTCAAAATCATATAAAAAAAGCTCATACTGGTGAACCAAAACGACCGGGTTCGAGAAAAGGGAAAGATGTATCTATAGATGGTGAGCCCACGGTTCGCAGGAAGCGAGGACGTCCGCGGAAAGTGAAGTCAAATGAGCCAACGGTGACTGTTATAACCGGTGATGGCTTGAACCAACCTTTGAATGCAGAGATTCCTTCTGTTCCTGGAAATCACTTTATTTACTATACGATTATGTAA
Protein Sequence: MLKIAESMGEIIDSNDEKLQLLVKATQPSEEPSCIHSSCLLYGSSATPASPDTPPILTPQDLHTSVGLSPSQSPLGMTMTPPAQEHASVTGLRVSLGSPEVPVPPSESVGEDRQLYQRPKTPVSTPEPKSKVTRRKQRRRSARLRRGSGHGAEPSSTPAVKTASDPAPTSDALPTPSSSLQPSEPLSVAASATESSASQGHNTVVFTDSIGKNLGPLLGNKLMQKVTNICMPGASFIQIVERLLKMEYQLNTTIVLLIGNSTAKMSEIDADGDFTRVWVKTEIKYEPLDSDEINVFAGEDNVEENVLGDDDPMKYFQTEVELDVKDESDPNFVKVRKTHKRKFKCPVSACNYVAAHRHALKAHVATHSKEKPYNCGFCEYSTKFLTALKRHEKTQHRVKNESHLKEKLKELKCESCDYTTSIKNNMKSHVESHYNDYFICNMCEYETVLENMFKMHMEQHEAEKNEIAGDDSKENITEAVMKIARSIKTESITTSTQETLQPKNETKMATTLKTTELKCPHCDYKSSYRHHFKTHLRKHSNDKDFKCDLCEYETKYPTALRRHLKTQHTGDKIKKRSADKVASTKMRKRMHSDKILSCSQCDYSTKWRNALLIHIRKHNDEKPFLCDQCDYSTYYSSSLQRHIIQNHRHSDDPNNENHKPHICEICGFRSLFKVNLKNHMRKHSVDKQFKCQHCSYATAYRNCIDKHMRMHDRKDRKIAFQCEKCPFYTQFEGKMSLHLVKIHKQQLENGHRCPYCDFSTTIKWRLNIHIQRSRQEEPIKCKYCDFQTEYKCEGKIHKMKHFPNDIPHEYVQAKVEKNILDNGSKNLEAVVNSADANLQGGANLVSSVNEASKIIHQNLNSKMLQNILPSNSKHSADTLVERAQNKATKRKKTADAEFQTGLKNQTNDFRNQLDISTINWDKIPVLKSADSEKPFGCYNCSYTARFKAAVQRHFQRHHGDKTRPYKCSYCDFAGSTKDSLGTHTKKSKLDHVKTCLECDFSSTYKCQLVAHQKIHYKYRCAVCTYSCKQKVTLDAHYLLHQGTALKCKVCDYVTVKRSSLIYHMMTHTGIRPLQCRYCDYSSGRRDLLRNHMRRFHGDVIHNIENQPEIVESVENGKNEEPNVIEIEIPNDTPVMDDSDNEYDTAKTEENVSEYFSPNRSEPYENYAAAFENEEEKIAHQNFEHFLPTYAVVEQPRSNEQTQEKVTEAKVNVIENQTYEIPIIESNILNWERIPVRINKKNPEKPFECYNCSYASKFRGAIRKHFQRHHGNKARPYKCPNCDFAGSTKDSIGKHRNRGILETAKTCKDCDFSTLYQCEYVMHQKIHYKYRCTMCTYACVMKSTLEDHYLIHEGGLLKCSYCSFETKSKYYLKCHETQHREGRRKYVCDHCNYSTHTRSIITTHLKKHFERSNENSSSTKKPEKPAANSVLKPFKCKYCPYSSSGKVWLRKHVKKFHIDDENATENQLESSEKPFKCHLCPFVSSGRGWLNNHLKIVHNLHDYIIEAQSIPVEKPLKCQNCSYATTGKSWLRNHIRKFHNNEPKMRKPAEKNFKCPYCSYSSTGKGWLKNHVKVVHKIVENNEIPESQPEFIDQPFKCLYCPYSTAAQIRLENHVQRFHVEDPNGTENSSESPEKPFKCQYCNYSAAGQAWLQNHIDKYHTAETQSGSVEKCFKCELCPYAASGKAWLQNHIKKAHTGEPKRPGSRKGKDVSIDGEPTVRRKRGRPRKVKSNEPTVTVITGDGLNQPLNAEIPSVPGNHFIYYTIM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -