Basic Information

Gene Symbol
-
Assembly
GCA_934041175.1
Location
CAKOGU010000396.1:466724-488663[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.001 0.095 14.3 0.5 2 21 459 478 458 481 0.89
2 21 0.0001 0.0099 17.4 0.3 1 23 487 509 487 509 0.97
3 21 3.3 3.2e+02 3.2 0.4 8 23 531 546 530 546 0.90
4 21 3.3 3.2e+02 3.2 0.4 8 23 568 583 567 583 0.90
5 21 3.3 3.2e+02 3.2 0.4 8 23 605 620 604 620 0.90
6 21 3.3 3.2e+02 3.2 0.4 8 23 642 657 641 657 0.90
7 21 3.3 3.2e+02 3.2 0.4 8 23 679 694 678 694 0.90
8 21 3.3 3.2e+02 3.2 0.4 8 23 716 731 715 731 0.90
9 21 3.3 3.2e+02 3.2 0.4 8 23 753 768 752 768 0.90
10 21 3.3 3.2e+02 3.2 0.4 8 23 790 805 789 805 0.90
11 21 3.3 3.2e+02 3.2 0.4 8 23 827 842 826 842 0.90
12 21 3.3 3.2e+02 3.2 0.4 8 23 864 879 863 879 0.90
13 21 0.46 44 5.9 3.7 3 21 895 913 894 918 0.93
14 21 4.3e-05 0.004 18.6 0.4 1 23 926 949 926 949 0.94
15 21 0.0039 0.37 12.5 2.3 1 23 954 977 954 977 0.97
16 21 8.7e-06 0.00083 20.8 2.8 3 23 986 1006 985 1006 0.97
17 21 3.6e-05 0.0034 18.9 0.5 1 21 1012 1032 1012 1033 0.96
18 21 3.6e-05 0.0034 18.9 0.5 1 21 1042 1062 1042 1063 0.96
19 21 3.6e-05 0.0034 18.9 0.5 1 21 1072 1092 1072 1093 0.96
20 21 3.6e-05 0.0034 18.9 0.5 1 21 1102 1122 1102 1123 0.96
21 21 3.6e-05 0.0034 18.9 0.5 1 21 1132 1152 1132 1153 0.96

Sequence Information

Coding Sequence
ATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAATGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAATGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAATGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGTGAGTATTGATAATGTATGTATGTGTGCAGGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTGCGCGCGTCTCGTGCTCGCAGTGCGACAAGACGTTCAGTCACCGCGCCGGACTGATGACGCACACCGTCGCGGTACACAAGATGAACAACTCGTTCCCGTGCGCGGAGTGTGGCAAAGTGTTCCGGTGGCGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTCTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGTGTGTTGCAGGTGTGTCTGCTCGATGTAGTGTGTGTGTCGCGGTACACAAAGTGTTCTGATACACGCACCAGCCTCAACAAGCACATGGCGCGACACAGAGACAAGGTGAGCGTGTTGCAGGGTCCGACGACGGCGGCGCACTGCGTCGAGTGCGACGTGTCCTTCAGAAGTGTCTGCTCCTACAAGCGTCACCTGCGGAACAGTCTCAAGCACGTCACGCACGAGCAGCTCAAGTTCGTGTGCGACGAGTGCGGTCGTCGGTTCGCGAACAAGACGAAGCTGCGCGACCACATCGAGGAGAAGCATCTGCACCGCGCCTTCTCGTGCCAGCTGTGCGGCAAGCGGAGCAAGAACAGGGTGTGTCTCGAGCAGCACGTACGTAATGTGCACCGCGGGCGTCCCGCCACGCGCATGTGTCACCACTGCGGCAAGGGATTTCCGACGAAGGTGCAGCTAGAATCCCACATCAGGTCCCACACAGGAGAACGTCCCTACATCTGTGAACTGTGTCCCACCACCTTCTCACAACAGAGCAACTTGTACAAGCACACCAGACAGGTATGTCCCACACGAGAGTGTCGCTACATCTGTGAACTGTGTCCCACCACCTTCTCACAACAGAGCAACTTGTACAAGCACACCAGACAGGTATGTCCCACACGAGAGTGTCGCTACATCTGTGAACTGTGTCCCACCACCTTCTCACAACAGAGCAACTTGTACAAGCACACCAGACAGGTATGCCCCACACGAGAGTGTCGCTACATCTGTGAACTGTGTCCCACCACCTTCTCACAACAGAGCAACTTGTACAAGCACACCAGACAGGTATGTCCCACACGAGAGTGTCGCTACATCTGTGAACTGTGTCCCACCACCTTCTCACAACAGAGCAACTTGTACAAGCACACCAGACAGGGAGAAGTGTATGAGAATATTAAGAGACTGTGCGAGAACTTTGGGAAGGACGGGAAGGCGAGAAAAACTGTGGACTATTTAACAACGCGGATTGTGTCCCTGGAAAACCAATGGGAAGATTTTGAGGTCAGGCACGTGGAACTTCTACAAAAAACTGACCCGGCCCATGAATATTTTACGAAACAGGTGTTTGAGCAGACTAGAAATATGTACCAGAAAACAAGAAAAGCTATTCTGGGTTTACTTGAATCAACTTCGAAGGCTGGAAAAACTATGGAGGAGGAAACAAGTGTTGAAAATCCGACAACACACAAGACAACTGAGATACTGAGGCaacaaagatctaattttaaggctttcgagagaactatgacggaaataaacatggagaacactgtggagagatgggaaatggaggattatctgaaaactttgaaggtgaaatgggaaattattgacaagcgacactgggagttggatagcttgctccaggaagaagatcatgatgatgagtacgagaaaaactatacaaggctagaaaaacactatgacgaattacgaagacagctgaacagcaaaatctgggcgaacgttcactaccatgaatcaacgccgcgtatggagattcccgaattctcgggtaactataatcaatgggtatcatttaaggatctattcacggaaactattcataacaacccattgataccaaaaactcagaagatgaaacacctgaaaactaaactaaaaggggaagcattacaacaagatctattcacggtaactattcataacaacccattgataccaaaaactcagaagatgaaacacctgaaaactaaactaaaaggggaagcattacaacaagtacagcacttgactattagcgctgaaaactacgattcctgttgggaaatattaaatcatcgcttcaacaacaaacgtatgatgtttaattcttacatgaatacgatgctgaatcttccagtaattcagcaagcgactgcttacgtcataaaaaatatgcatgacgtcataatcgagtgtttaaacggtctcaacaacataggaattgacatagctacttgggatccaataatcgtgcatttgatgttgcaaaagctcgactctgtaacatataacgagtataacaaggagctggaagacccgcgagaactaccaaacttcgatgacttcagcaattttctggaaagcaagttcatggcactggaagctgcgaggagtcaccagaaaacggaattaagtaatccgaagccgtcaacatctagaggcaacaattataaaaacaaggcatggcagcagggattttctaaaacttttcatgctaccgccaaaaactgccccctttgtcagaaagatcatgtgttgatgcagtgccgccaatttgttgacatggattcaggaaaacggaacgaaacggttgcaaaacttcgcgtttgcaaaaactgcttatacagccatggaaacagcgaatgtcggtcaacaaacaactgcaaactatgtcatcagctgcatcacacgttacttcatccatacggaaatagtaacgattctgtaagacgccataatcaacaatcgggtcaacggaagtataattaccccaagtctagtcacgtgtcgggtgagacacaagaagttttgttggctacggtaatactgagagtgaaaactgtagatggaacttatgtgaacttacgcggtttgctcgaccaaggaagtcagataagcttggtcagccaaaatgccgcgcaactactgaggctgccgagacgaaaactaaatgcaacggtaacaggagtgggagtgacttccaccgactgtaagggtttgcttcagattgagtgtaaatccatttactcagattacactttaacaattgaggcgttaataatgccgaagctaataaacaagttgccgaaccaaacctttgatactggaaattggcctcatctccataacttgaagctcgccgatccagagttcaatatatcacgatctgtcgacatactcctgggggcggacgtgtattctgacattatcctggaaggtgtaattaagaggtcttcacactatccaatcgctcagcaaactcaactaggatgggtgttatgtggaaatgttaaaacactcaactgtcacataaccttgacaggaactgataacttagtgaagttttgggaaaatgaagatattttggaaactgaggagacgtctgaggaggacagatgtgaatatttttataaacaaactactgagagacgcaacgacgggagatatgtagtccaaatgcctttatatgaagactttaaagagaaacttggaaactccaaatccaagtgtatctcacaatttcttcaattagagagacgactacaaagacagccgaagctagaaaagatgtataaggagttcattcatgaatacatggaactggaacacatgaaaccttctactgcaactactgacgaaagattggaatgttttttacctcatcatggagtcctgagggaatcatctatgacgaccaagctgagagtggtgttcaatggatcgatgaaatttagcggtcccaagtcacaagacagcttaaattcgcttatggaaaagggtcctaacatgcaaaaggatatccagtcgctaattatcaaatggcgaagctatcgatacgtttttactgccgacatcgaaaaaatgtatcgacaaatcctgatacatgaaaaacagcaaggattgcaaaaaatcatctggcgcgacagcccttacgaaaacttgaaggagatgcaactctgtactatcacgtacggaaccaagagtgcgccatatttagctatgagaaccctaaaacagctagcaatagacgacggacataagtttccgctagccgctgacatccttcaaaacgaattttatatggatgatttagtcagcggaacgaattcgctaagttcagcaaaaatactacaacaacaattgattcatttactaagaggcggtggctttaatttacgaaaatggtctagtaacgaagccgaactactgactcatttatcagcggatcaagtttcatcaacaacatttgatttcaagcaacaagattcgatgaaaacgcttggattaatctggaatccgaagactgataatttcatgtttaactgggatatgggagataactatgagaaacggattactaagagaatgttattatcagaaatctccaaaatgtatgatccacttggctggctatcccctataacggtagctgccaagattttatttcaacaagtttggctaaacaaaactgagtgggacgaagatttatctgagagtatatgtacggagtggagaaaactaagaagcgaactcttcagtattaaaaaactgaaattagaacgatggatagaaagctcagacagcaatatgcaattacatggattcagcgactcgagcgaaaaagcgttttcggcggtcgtatttagccgaagtatagataaggatggcagagcaaaaatcaccctttttgctgctaaaacaagagtggtatcgctgaaacaaaaaactagcttaccgaaaaaggaactctgtggcactttgttactggcgaagttaatagaaaaaattattaactccttacaaggaaaaactatgaagatctttgggtggtgtgattccaaggtagtcctggcctggattcaaggagaacagtcaaggtgggaaaaatacatttctactcgggtagccaagataacgaagataatccctggtaaacagtgggcttacgtcaagtcagaagaaaaccccgcggactgcgcatcgcgaggactttcaccgataaaactggctacctttgacctatggtggcaaggacctgcTTGGCTTAAAAACTTTGAGGAAACTAAGGTGAAGATTTGTCTTTATGCAACAGATAACGGAACTAACAGGCTGCTTATGAAAAGCGAGATTGACGTGCCATCTCTGAAAACGTCAATAAACGACATCGCAGATGTGACTCTACATGGCATCCATTACAAAGAGTCCGCCAACTTAGATAGCCAACTTAAAGACGTAGACGAGAAATTACGGCTACAACGACAACGAGAGAATTTACCAAACGAGCTCTCTACACACGATGTACATTTATATTTCGTGTCGTACTCGCTCTGGGGAGCAGCGGCAATCGGAGTACTCGCATGGATCATCACAAGGCGGTACAGACGGTCACAACGACTAACTGGGCCGGAGCCCCGATCGGCGGCGGCGGCGGTGGAGACTACTGCGACGGCAGGGGCGCGGGCGGCGGAGACGAGCCACGGGACGGCGAGGAGGTCTGATGACTTTGAACTACAACCCATGCGACAATGGCCGCCCCCTCCTCTAGTGAAAGAAGCTCTAGTGAAAGAAAACTTAGTGTAA
Protein Sequence
MCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAMRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAMRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAMRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRVSIDNVCMCAGARLVLAVRQDVQSPRRTDDAHRARVSCSQCDKTFSHRAGLMTHTVAVHKMNNSFPCAECGKVFRWRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQVCLLDVVCVSRYTKCSDTRTSLNKHMARHRDKVSVLQGPTTAAHCVECDVSFRSVCSYKRHLRNSLKHVTHEQLKFVCDECGRRFANKTKLRDHIEEKHLHRAFSCQLCGKRSKNRVCLEQHVRNVHRGRPATRMCHHCGKGFPTKVQLESHIRSHTGERPYICELCPTTFSQQSNLYKHTRQVCPTRECRYICELCPTTFSQQSNLYKHTRQVCPTRECRYICELCPTTFSQQSNLYKHTRQVCPTRECRYICELCPTTFSQQSNLYKHTRQVCPTRECRYICELCPTTFSQQSNLYKHTRQGEVYENIKRLCENFGKDGKARKTVDYLTTRIVSLENQWEDFEVRHVELLQKTDPAHEYFTKQVFEQTRNMYQKTRKAILGLLESTSKAGKTMEEETSVENPTTHKTTEILRQQRSNFKAFERTMTEINMENTVERWEMEDYLKTLKVKWEIIDKRHWELDSLLQEEDHDDEYEKNYTRLEKHYDELRRQLNSKIWANVHYHESTPRMEIPEFSGNYNQWVSFKDLFTETIHNNPLIPKTQKMKHLKTKLKGEALQQDLFTVTIHNNPLIPKTQKMKHLKTKLKGEALQQVQHLTISAENYDSCWEILNHRFNNKRMMFNSYMNTMLNLPVIQQATAYVIKNMHDVIIECLNGLNNIGIDIATWDPIIVHLMLQKLDSVTYNEYNKELEDPRELPNFDDFSNFLESKFMALEAARSHQKTELSNPKPSTSRGNNYKNKAWQQGFSKTFHATAKNCPLCQKDHVLMQCRQFVDMDSGKRNETVAKLRVCKNCLYSHGNSECRSTNNCKLCHQLHHTLLHPYGNSNDSVRRHNQQSGQRKYNYPKSSHVSGETQEVLLATVILRVKTVDGTYVNLRGLLDQGSQISLVSQNAAQLLRLPRRKLNATVTGVGVTSTDCKGLLQIECKSIYSDYTLTIEALIMPKLINKLPNQTFDTGNWPHLHNLKLADPEFNISRSVDILLGADVYSDIILEGVIKRSSHYPIAQQTQLGWVLCGNVKTLNCHITLTGTDNLVKFWENEDILETEETSEEDRCEYFYKQTTERRNDGRYVVQMPLYEDFKEKLGNSKSKCISQFLQLERRLQRQPKLEKMYKEFIHEYMELEHMKPSTATTDERLECFLPHHGVLRESSMTTKLRVVFNGSMKFSGPKSQDSLNSLMEKGPNMQKDIQSLIIKWRSYRYVFTADIEKMYRQILIHEKQQGLQKIIWRDSPYENLKEMQLCTITYGTKSAPYLAMRTLKQLAIDDGHKFPLAADILQNEFYMDDLVSGTNSLSSAKILQQQLIHLLRGGGFNLRKWSSNEAELLTHLSADQVSSTTFDFKQQDSMKTLGLIWNPKTDNFMFNWDMGDNYEKRITKRMLLSEISKMYDPLGWLSPITVAAKILFQQVWLNKTEWDEDLSESICTEWRKLRSELFSIKKLKLERWIESSDSNMQLHGFSDSSEKAFSAVVFSRSIDKDGRAKITLFAAKTRVVSLKQKTSLPKKELCGTLLLAKLIEKIINSLQGKTMKIFGWCDSKVVLAWIQGEQSRWEKYISTRVAKITKIIPGKQWAYVKSEENPADCASRGLSPIKLATFDLWWQGPAWLKNFEETKVKICLYATDNGTNRLLMKSEIDVPSLKTSINDIADVTLHGIHYKESANLDSQLKDVDEKLRLQRQRENLPNELSTHDVHLYFVSYSLWGAAAIGVLAWIITRRYRRSQRLTGPEPRSAAAAVETTATAGARAAETSHGTARRSDDFELQPMRQWPPPPLVKEALVKENLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-