Yseq006918.1
Basic Information
- Insect
- Ypsolopha sequella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_934041175.1
- Location
- CAKOGU010000200.1:348169-387221[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-15 6.2e-12 46.2 0.0 1 39 287 326 287 329 0.95 2 2 3.1e-18 2.2e-15 57.2 0.0 1 43 497 540 497 542 0.95
Sequence Information
- Coding Sequence
- ATGTATGCAGAACCCATTTTTACTAAAAGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGCAGAAAATGGAAATTATACCAAGACGGTTTACTGCCCAGAAGGAGCGACCCTGGCGAGCGGTCCAGCGACGAGGAATCAATGCCGGCGTCGGACGGGCCCCCTCCTGGGCTCAAAATCAAAACCATAGAGCAGATAAACGCTCCCGAAGACGGCGAGAGGCCCAAAACCGAACCCGAACCAGAACCCGAGCGAAAGGAGACGATTCTAGAGTCGTTGATAAAGCGGCCGGCGACGCAGCCCAAGTTGGAGTACGCCGAAGAGCCGGCAGATTGGAAGCCGCCGGACAAATGTTACTTCTGTGTGGACGGCGAGCGGGGTGAGGGGGCGGCAGCGGGCGCGGAGGCGCGGCCCGCGGGCGGCGCTACCAGTCCAGCATCAGAGTCTGACAGCAGCTCCGTGTCCGGAGCTAAGTCGCCAGCAGCCGCACCGCCACTGATGCTGCAGCATCTGTTGCAACTGCAAGCGCAGAATCCACAAGCTATCGCTCAGTTCCAACAAATGATGACAGCACTGGCCACGCTGGGCACTGGGCTGGTGCCGCCCGCCCTGCAGCAGGCCTGGCTCATGCAGCGTCTGGTGCACTCCCGGCAGCAGGAGCGACCACCCGTAGACGTGGATAAGATCACCGTCTCCGAGGCTTCGCCGTCGATGACGTCAGAGCAGCCGCTGGACCTGAGTGCCAAGTCTTCGAGCACTGGAGGTAGCCCCCCGCCCGGTGGGAAACATCTGGATAATCACAGACTAAAAAGTTCCCTCTTGGAAGGATCAAGCAACTGCATCACCCGTAAAGCATACACTGATGAAGAATTGCATTCTGCAATCCGTGATATTCAATCAGGGAAGCTTGGCACTCGTAGAGCTGCTGTGGTCTATGGCATACCTCGCTCCACACTCCGGAACAAAGTCTACAAGCTTGCTTCAGAGCCGGGGCACGAGTCAGAAGAAGGCAGCGACTCCGAAAGGGGAGATAGAGAATCACCACCCTCCGTTATTCTAAAAATACCAACATTCCCCATCCCCGACGAGAAGTCTAATTCGCCAGCCACATCATTCGAGGCAACCACGCCCGTTACCCCGATAACACCTTTACTTCATCAGCACCAGCCGAGTCTGAAACCGCCATCACAATTGTTTCTGCCTCCATCTGTATTTGCCGATTCTCCTTCTCCGCAGCATCTGTTTACGTCACTTAATGACGTCATCGCTAAAAGTATTAGCCAGAAGTTCCAACTTGACAAGCCCCACCATCAACCGGAACATCATTACATGAGAGCGCCTGAAAGACACGTTTCTGTTATCAAAACTCCACCGGATAATCCGAGGAACTTTTCAGTTCCTAGCAATTCCCGGGGTCAACCCAGCAACAATGGTCAACCAGCAGGAGGCAAAGGCACCAGACCGAAGCGAGGCAAGTACAGAAACTATGATAGAGATAGTCTCGTTGAAGCAGTAAAGGCGGTACAGAGAGGAGAAATGTCCGTGCATCGAGCCGGCTCCTACTATGGCGTACCACATTCAACCCTCGAATACAAAGTGAAGGAACGGCATCTGATGCGCCCACGCAAACGTGAACCGAAGCCTCAACCGGATGCAACTGGCAAACCACAGCCACCTAAACCGCAGCCACCAAAGCCTCCGACCAAACCTTTCTCGAACGGCTTAAACGGGCCTGACAATCCTGGCTTTGCGCCTGGCTATCCTTACTGGGCACCTCCAAGCTTTGCTCCACCACCACCGACTCCTGATTTATATGCGTCGCATATGATGCGCCGATTACGCGAAGAAGTACCGCCTCAAACGAACGGTTCTTTCCTAGAAGGAATCATCAGATCGACTCTCGAAAGACCTGGTGCTGCATTATTGCAACGGCTTACTGCCGAGTCACGACCACCAATGACGCCTAATAATGATGCTCCAAGTCTTCTGCGACGATTGGCGGGAGACCAAAATAACGATGATTGTTCACCGGCTCGGCGTCCCCGAATAGATAGTTCCGATCGGCAGTTGGCTGCGGAGATGCGGGAGACGGTGCAGCGTCTGCGAGCTGCTGAGAAGATGCGGCCGCGTAACGGCACGCCGACGCCACCGGCTGGCCCGCCAGGTGCTGCTCTGTCTCCACCGCCCGCGCCGCCAGCCGCGCCGCCTGACCGCCCCTAG
- Protein Sequence
- MYAEPIFTKSLERVAEELMGRRKWKLYQDGLLPRRSDPGERSSDEESMPASDGPPPGLKIKTIEQINAPEDGERPKTEPEPEPERKETILESLIKRPATQPKLEYAEEPADWKPPDKCYFCVDGERGEGAAAGAEARPAGGATSPASESDSSSVSGAKSPAAAPPLMLQHLLQLQAQNPQAIAQFQQMMTALATLGTGLVPPALQQAWLMQRLVHSRQQERPPVDVDKITVSEASPSMTSEQPLDLSAKSSSTGGSPPPGGKHLDNHRLKSSLLEGSSNCITRKAYTDEELHSAIRDIQSGKLGTRRAAVVYGIPRSTLRNKVYKLASEPGHESEEGSDSERGDRESPPSVILKIPTFPIPDEKSNSPATSFEATTPVTPITPLLHQHQPSLKPPSQLFLPPSVFADSPSPQHLFTSLNDVIAKSISQKFQLDKPHHQPEHHYMRAPERHVSVIKTPPDNPRNFSVPSNSRGQPSNNGQPAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDATGKPQPPKPQPPKPPTKPFSNGLNGPDNPGFAPGYPYWAPPSFAPPPPTPDLYASHMMRRLREEVPPQTNGSFLEGIIRSTLERPGAALLQRLTAESRPPMTPNNDAPSLLRRLAGDQNNDDCSPARRPRIDSSDRQLAAEMRETVQRLRAAEKMRPRNGTPTPPAGPPGAALSPPPAPPAAPPDRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -