Basic Information

Gene Symbol
Kdm5
Assembly
GCA_934041175.1
Location
CAKOGU010000408.1:829818-832277[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-22 2.2e-18 67.6 0.1 3 89 96 178 94 178 0.92

Sequence Information

Coding Sequence
ATGGATTTCAACATCAAGAATATCCAGAAAAATGCTATGCAAAGGAGTGTGGAGTTTACTTTCACTCCTCCACCCGAGGCGCCCGTATTCGAACCGACGGTCGAAGAGTTCATGGATCCACTGGGATATATCGCTAAAATACGTCCAGTGGCTGAAAAGACGGGAATATGCAAAATAAAGCCGCCCGCACGCTGGCAGCCACCGTTTTCGCTTGATGTCGACAAACTAAAATTCGTACCACGAATACAAAAAGTCAATGAATTAGAAGCCATTACGCGTCTAAAACTTTTGTTCCTTGAGAAGATACTTAAATTTTGGGAGCTGCAAGGCGCTCCATTGAAGATACCGATGATCGAAAATAAAACATTGGATTTGTATTGCCTTAAGTTTTGGGTAGATGAAGAAGGAGGATTTGAAAACTGTAATACGCCTAAAAAATGGCGTAAGATCGCATGTTCGATGGGGTATGGTCAAAATGCGAACTCGATGAATTTTCTAAAAAATAATTACGAGAAAATTCTCTTGCCATATGATATCTTTGAGAATAGCAAGGCTGATATTCTGAAAACTGTAAAAAAGACTGAACCAAAAACAGAAATTAAGGAAGCTGATACAAAACCAACTCATACAAATATATTCAAAGAAATTGCTATTGAATCTATTACCAAAGTCAAGGATGAAAGTGAAAGCAAAGAAGAAAAGCCCCAGTCAAATATTAAGAAAACTAAAACAGGATCTGACATACACAATGAGACAGAGTCTTCCAAACATAAGACTGAAAAAGAAGAAACAGACAGACGTTGCAGGGAACTAAGAAGACTGGCCACATACGGTCCAGGACCTAAAATGCCTGGACTGAATGATGAAGAATTTGATATTACAAAGTCTAGAAAGCGGCCAAGATATGACATGGACCCACTCGCAATTTATACCTGTGCCATTTGTCAGAAAGATCACAGAGATGATGTTTTACTTATTTGCAATGGTTGTTCGGATACATACCACACATTTTGTCTAAAACCACCACTTAGTGCTGTACCTGATGGTGAATGGAGATGTCCATGTTGTATAGCTGAAGAAGTTCACAAACCGGCTGAAGCCTTTGGTTTTGCCCAAGCTGAGAGAGAGTATACTCTACAACAATTTGGAGAAATGGCTGACAAGTTTAAATCTGATTATTTTGGCATGTCAGGCCATCTAGTACCTGTGGGTGTTGCTGAAAAAGAGTTCTGGAGAATAATTTCTTCAGTGGAAGAAGATGTCACAGTTGAATATGGTGCAGATCTGCATTCTATGGATCATGGATCAGGTTTTCCTACCAAGTCTTCACTTAACCTGTATGCAGGAGACCAAGAATATGTTGATTCTGGATGGAATTTGAATAACCTTCCAGTTTTAGAAGGCTCAGTATTACGTTTCATAAATGCTGACATATCTGGCATGACCGTGCCATGGATGTATGTAGGCATGTGCTTTGCAGCATTCTGTTGGCATAATGAGGATCATTGGAGTTATTCTATTAACTACCTTCATTGGGGTGAAGCAAAGACTTGGTATGGTGTTCCAGGAAGTGGGGCAGAATTGTTAGAAAATGCCATGAAGGCAGCAGCACCTGATCTATTCAAGTCTCAGCCAGATTTGCTGCATCAGTTGGTTACAATAATGAACCCAAACATTTTGATGGAGGCTGGTGTGCCAATTTATAGGACTGATCAGCATGCAGGAGAATTCGTTGTGACCTTCCCAAGAGCATATCACACAGGCTTTAACCAAGGTTATAATTTTGCTGAAGCAGTTAACTTTGCACCACCAGACTGGCTCAAGGTTGGCCGTGACTGCATCACACATTACAAGAACCTTAAAAGATTCAATGTTTTTTCTCATGATGAATTAATTTGCAAAATGGCTTTAGAAGGAGACCGTTTAGATTTAGAGACTGCTTTAGAAACACAAAAAGAATTAGTTAACGCTACGGAAGAGGAGGGCCGGCTTAGAGCAATGATGGCTAAGAAAGGATTGAAGAATGTCCGAAGAACTGCATTTGAGTTGCTCGGTGATGATGAAAGGCTTTGTGAAGTATGTAAAACTACTTGCTTCCTGTCATCAGTATCTTGTCTAGTATGCAATCACATGGCATGTCTACAGCATGCTGACAATTTCTGCCAGTGCCCGTTGGACAAAAAGACTTTGAACTACCGTTACGATATGGATGAACTGCACATAATGCTGCAAACTATTGACTTTAGAGTGAATAGCTTTGACAAATGGATGACAGAGACAAAGAATATTCTCCTCCCAACAGCTCCAGATATTGGAAGGACACAGAAACTAAAAGGACTAGTTGATGAAGCAGATGAGCTTAAAATACCAAAGTGCACGTTGCTAACACAACTAAAGGATGAGTATATGAAGTCGACAGAGAATGTTGAGCCTATTATTATAGAATTAGATGATGATTGA
Protein Sequence
MDFNIKNIQKNAMQRSVEFTFTPPPEAPVFEPTVEEFMDPLGYIAKIRPVAEKTGICKIKPPARWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWELQGAPLKIPMIENKTLDLYCLKFWVDEEGGFENCNTPKKWRKIACSMGYGQNANSMNFLKNNYEKILLPYDIFENSKADILKTVKKTEPKTEIKEADTKPTHTNIFKEIAIESITKVKDESESKEEKPQSNIKKTKTGSDIHNETESSKHKTEKEETDRRCRELRRLATYGPGPKMPGLNDEEFDITKSRKRPRYDMDPLAIYTCAICQKDHRDDVLLICNGCSDTYHTFCLKPPLSAVPDGEWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFGMSGHLVPVGVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYAGDQEYVDSGWNLNNLPVLEGSVLRFINADISGMTVPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAELLENAMKAAAPDLFKSQPDLLHQLVTIMNPNILMEAGVPIYRTDQHAGEFVVTFPRAYHTGFNQGYNFAEAVNFAPPDWLKVGRDCITHYKNLKRFNVFSHDELICKMALEGDRLDLETALETQKELVNATEEEGRLRAMMAKKGLKNVRRTAFELLGDDERLCEVCKTTCFLSSVSCLVCNHMACLQHADNFCQCPLDKKTLNYRYDMDELHIMLQTIDFRVNSFDKWMTETKNILLPTAPDIGRTQKLKGLVDEADELKIPKCTLLTQLKDEYMKSTENVEPIIIELDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487498;
90% Identity
iTF_01222267;
80% Identity
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