Basic Information

Insect: Yponomeuta rorrellus
Gene Symbol: stc
Assembly: GCA_947308005.1
Location: OX371005.1:3801365-3814097[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.7 2.2e+04 -3.9 1.6 15 19 466 470 465 470 0.81

2 13 0.028 3.8e+02 1.8 1.2 2 10 498 506 498 506 0.93

3 13 2.7e-05 0.35 11.5 18.1 4 19 514 529 512 529 0.93

4 13 4.8e-07 0.0064 17.0 14.6 1 18 565 582 565 583 0.97

5 13 1.2 1.6e+04 -3.4 2.6 7 11 587 591 587 592 0.91

6 13 0.00029 3.9 8.2 8.7 1 18 624 641 624 642 0.98

7 13 4.9e-05 0.65 10.6 13.0 1 19 683 705 683 705 0.89

8 13 2 2.7e+04 -4.8 2.2 6 10 735 739 735 739 0.94

9 13 0.0027 36 5.1 7.2 1 11 745 755 745 756 0.95

10 13 0.012 1.6e+02 3.0 0.2 4 10 760 766 759 767 0.93

11 13 3.1e-07 0.0042 17.6 16.9 3 19 774 790 772 790 0.92

12 13 0.00029 3.8 8.2 8.9 9 18 836 845 834 846 0.92

13 13 1.5e-09 2e-05 25.0 9.4 1 16 882 897 882 898 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.7	2.2e+04	-3.9	1.6	15	19	466	470	465	470	0.81
2	13	0.028	3.8e+02	1.8	1.2	2	10	498	506	498	506	0.93
3	13	2.7e-05	0.35	11.5	18.1	4	19	514	529	512	529	0.93
4	13	4.8e-07	0.0064	17.0	14.6	1	18	565	582	565	583	0.97
5	13	1.2	1.6e+04	-3.4	2.6	7	11	587	591	587	592	0.91
6	13	0.00029	3.9	8.2	8.7	1	18	624	641	624	642	0.98
7	13	4.9e-05	0.65	10.6	13.0	1	19	683	705	683	705	0.89
8	13	2	2.7e+04	-4.8	2.2	6	10	735	739	735	739	0.94
9	13	0.0027	36	5.1	7.2	1	11	745	755	745	756	0.95
10	13	0.012	1.6e+02	3.0	0.2	4	10	760	766	759	767	0.93
11	13	3.1e-07	0.0042	17.6	16.9	3	19	774	790	772	790	0.92
12	13	0.00029	3.8	8.2	8.9	9	18	836	845	834	846	0.92
13	13	1.5e-09	2e-05	25.0	9.4	1	16	882	897	882	898	0.96

Sequence Information

Coding Sequence: ATGTCACAGTGGAACAACGCTTTCGCTTTCAACAATCAGTATCACGGCCCTGATATGTGGAACGGTGATCTCAATGCCCAGCAACATGGGAATGAAAACCCCAACTACTACCCCAACAGACATGAATATGAACAACAGCAGGATAGTCAATATGTGAGCTTCAACGACTTTATAAACCAAATGCAAGGCAGCCAGACTGCACAGGCTGGCAACACCAATTATAGCAATGCTCAGTACCCTAATTACCCTGCAAATCAGTACAACTATGCCAACATGCCCTCCACTTCTCAGAGCAATCCATCCTTTGATACATATCAGTATAATGGGAGTGCCACAGGAAACACTCCAAATGGTGTGGACACATACCAGTCCGACACTAAGTCGCAATACAGGGCTGAATCAACGTCTGAGGCCAACAACTACACCGGTGATGTGGCGTTCAAATCTAACCTCACTGCAACAGCTACTGAATTTGTTCCAAAAGCTACAACTTTCAAGCAGCCTGCCAACCCCAGACCTAGGCAGGTGGACCAGCCTGAGTCTTCCTCCTCCTCCAATGGGTACAATCACAGAAAAAACAACTCTGCCAATGAAAGAAATTGGAGGGAGCGCCCTTCGTCTAGTTCCCACTTGAGTGAGAAACAGAATGGATCTAACCATAAAAGCCAAGATCCTAGCCCAAGAAACCAGGAATCCAACTATAGGAACCAGGAACAAAGCTCAAGGAACCAGGAGTCCAACTACAAGAGCCAAGAGCTTAGACCAAGAAATAAGGATAGGAACCATGAGTCTAGTCCAAGGAATCAAGATACAAATTATAGGAACATCGAAGGCAGTTCCAGATACCAAGAACCCAAAGAAAACAGCAACAACAAAAACCAAGCTAAATCAAACTCTAAATCCAGAAACAAACAGTCTGATGATGGTCGCACATTCTACAATAGTTCTGCCACCAAAAGCAGTCAGGATGTGAGGATTGGGAGAGGGGAGGGGTCTTCAGGAAGGCAAGAAGGGAGGAAGAACTGGGTCGGAAGCCAAAGGGTACGCCCAGCTGAACGAAACTACATGGATGATGAACAGTTTGCCAACAACTATCACCAGTACAGAGAAGAGAAGCAAGAGAGAGTCAGCAAGGTTCAAGCTGCCTCAAGCCCTGTGAAGAACAACAAGAACAAGCATTTCCCTAATAATAACGATCATGGAGCTAACACAGATATGACTCAGCGTGAGAGGCTGAGTGAGCAACTTGACAAGGGTACGCTGGAGTGTCTTGTGTGCTGCGAGCGAGTGAAGCAGACGGACACTGTGTGGTCGTGCTGCAACTGCTATCATGTGCTGCATCTGCGTTGCATTCGCAAATGGGCAATGAGCAGCATGCTAGAGGGCAAATGGCGCTGCCCAGCCTGCCAGAACCAGAGCGAGATGGTCCCCACGGAGTACCGCTGCATGTGCGGGGCGGCGCGCAACCCGGAGTGGCAGCGCGGCGCGGGCGGCGCCCACACGTGCGGCCGGGCGTGCGCGCGCGCTCGCCTCTGCCCGCACCCCTGCACGCTGCTGTGCCACCCGGGGCCTTGCCCGCCCTGCCAAGCTACTGTTAGCAAACAATGCGGCTGCGGCGCGGAGAGCCGCTCGGTGCAGTGCAGCAGCAAGCTGCCGCAGACGTGCGCCGGCACGTGCCGCCGGAAGCTCAACTGCGGCGTGCACGAGTGCGGCCAACCCTGCCACGAGGGACCCTGCGCCGACTGCGCCGAGGTCATCCAACAAGTGTGCCACTGCCCGGCCGCGGCGACGCGCTCGGAGCCGTGTACGGCCGCGTCGGCCGGCACGCGCAGCTGGGCGTGCGGCGACGCGTGCGGCCGCGTGCTGGCGTGCGGCGCCCACGTGTGCCGCGCGTCGTGCCACGCGCCGCCCTGCGCCGCCTGCGCCGCCGCGCCGCGTGCTAACGAGACTTGCCCCTGCGGGAAGATGCTGCTCGAGAAGGACAAGAGGAAGGTGTGTACGGACCCCATCCCGCTGTGCGGGAACATCTGCGCCAAACCGCTCACTTGTGGCCCGCAGGCCGACCGGCACTTCTGCAAGAGTGAATGCCACCACGGCGCCTGCCCGGTGTGTCCCGACAAGACGACGCTGCCATGTCGCTGCGGCCACGCCAACCGCGAAGTCCTCTGCCGCGAACTGGCTGAGATGATGGGCAACGTGTTCTGCCAGAAGAAATGCAATAAGAAGTTATCGTGCGGCCGCCACCGCTGCCGCACCCTGTGCTGCGCTGCTGAGTCCCACCGCTGCCCCGCGGTCTGCGGCCGCTCGCTGCCCTGCCAGCTGCATCGTTGCGAGGAGCTCTGCCACACTGGCCACTGCCCGCCCTGCCCGCGCGTCAGCTTCGAGGAGCTGCCGTGCGCGTGCGGCTTGCAGCGCGTGCTGCCGCCGGTGCGCTGCGGCACGCGGCCGCCCGCCTGCGCCGCGCCCTGCCGCCGCGTCCGCGCCTGCCGCCACCCGCCGCACCACGCCTGCCACGCCGGCGACTGTCCGCCCTGCGTCGTGCTCAGCACCAAGCGCTGCCACGGCGACCACGAGGAGCGTAAAACGATCCCGTGCTCTCAAGAGGAGTTCTCGTGCGGTCTGCCGTGCGGCAAACCCTTACCGTGCGGCAAGCATACTTGCATCAAGGTCTGCCATAAGGGCCCGTGTGACACTGCCAAGTGA
Protein Sequence: MSQWNNAFAFNNQYHGPDMWNGDLNAQQHGNENPNYYPNRHEYEQQQDSQYVSFNDFINQMQGSQTAQAGNTNYSNAQYPNYPANQYNYANMPSTSQSNPSFDTYQYNGSATGNTPNGVDTYQSDTKSQYRAESTSEANNYTGDVAFKSNLTATATEFVPKATTFKQPANPRPRQVDQPESSSSSNGYNHRKNNSANERNWRERPSSSSHLSEKQNGSNHKSQDPSPRNQESNYRNQEQSSRNQESNYKSQELRPRNKDRNHESSPRNQDTNYRNIEGSSRYQEPKENSNNKNQAKSNSKSRNKQSDDGRTFYNSSATKSSQDVRIGRGEGSSGRQEGRKNWVGSQRVRPAERNYMDDEQFANNYHQYREEKQERVSKVQAASSPVKNNKNKHFPNNNDHGANTDMTQRERLSEQLDKGTLECLVCCERVKQTDTVWSCCNCYHVLHLRCIRKWAMSSMLEGKWRCPACQNQSEMVPTEYRCMCGAARNPEWQRGAGGAHTCGRACARARLCPHPCTLLCHPGPCPPCQATVSKQCGCGAESRSVQCSSKLPQTCAGTCRRKLNCGVHECGQPCHEGPCADCAEVIQQVCHCPAAATRSEPCTAASAGTRSWACGDACGRVLACGAHVCRASCHAPPCAACAAAPRANETCPCGKMLLEKDKRKVCTDPIPLCGNICAKPLTCGPQADRHFCKSECHHGACPVCPDKTTLPCRCGHANREVLCRELAEMMGNVFCQKKCNKKLSCGRHRCRTLCCAAESHRCPAVCGRSLPCQLHRCEELCHTGHCPPCPRVSFEELPCACGLQRVLPPVRCGTRPPACAAPCRRVRACRHPPHHACHAGDCPPCVVLSTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKVCHKGPCDTAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -