Yror014417.1
Basic Information
- Insect
- Yponomeuta rorrellus
- Gene Symbol
- GATA-B
- Assembly
- GCA_947308005.1
- Location
- OX371001.1:21670744-21672951[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-18 2.2e-14 53.3 3.2 1 34 11 43 11 45 0.97 2 2 6.2e-18 1.7e-14 53.7 4.7 1 34 78 110 78 112 0.97
Sequence Information
- Coding Sequence
- ATGGCCGAGTTGTTCACGGAGGGGCGCGAGTGCGTCAACTGCGGCGCCATCCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACCAAGATGAACGGCATCAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCGACGCGCGCCCCGCGCCCCCCGCGCCCGACATGGGCGCGAAGCGGCCGGGCGTGGTGTGCGGCAACTGCGGCACGGGCACCACCTCGCTGTGGCGGCGCAACGCGCAGGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACGGCATCAACCGCCCGCTCGCCATGAAGAAAGACTCTATACAGACCCGGAAGCGGAAACCGAAGAATGGCATGAAATCTGAGCGCATAAACAAGACGCACGGCGCACACAGCGTCAAGTTGGAGAGCTTATTAGAGGGCGCGCGCAACTCTATCAACTACTACGTGAGCACGAACCCTTCGCTGAAGCTGGAGGAGCCGCCGCCGGCGCACACACACGCGCACGCGCTCTACGAGGACGAGCGGCGCTACGCCCCCGCCCCCGCGCCTGCGCCCGCGCCCACGCCCGCCCCGCTCGACGCCCAGCTTGACACGCTGCACGAGCGCCACGACCGCCCCACCGTCGTCTCCATGGGCAGCTGA
- Protein Sequence
- MAELFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYTKMNGINRPLKQPRRLVRQRDARPAPPAPDMGAKRPGVVCGNCGTGTTSLWRRNAQGETVCNACGLYFKLHGINRPLAMKKDSIQTRKRKPKNGMKSERINKTHGAHSVKLESLLEGARNSINYYVSTNPSLKLEEPPPAHTHAHALYEDERRYAPAPAPAPAPTPAPLDAQLDTLHERHDRPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01543515;
- 90% Identity
- iTF_01543515;
- 80% Identity
- iTF_01543515;