Yror007497.1
Basic Information
- Insect
- Yponomeuta rorrellus
- Gene Symbol
- ZNF217_1
- Assembly
- GCA_947308005.1
- Location
- OX371022.1:3468632-3488239[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.32 23 6.2 0.1 1 23 128 150 128 150 0.95 2 13 0.043 3.1 9.0 5.8 1 23 304 326 304 326 0.98 3 13 1.2e-05 0.00086 20.2 0.4 1 23 332 355 332 355 0.97 4 13 0.0065 0.47 11.5 2.1 1 23 360 383 360 383 0.96 5 13 1.4e-06 0.0001 23.1 0.4 2 23 567 588 566 588 0.97 6 13 0.00027 0.02 15.9 3.2 1 23 594 616 594 616 0.99 7 13 0.0043 0.31 12.1 3.8 1 23 745 767 745 767 0.96 8 13 0.00094 0.068 14.2 4.8 1 23 773 795 773 795 0.98 9 13 0.0047 0.34 12.0 2.0 1 23 804 826 804 826 0.98 10 13 1.2e-05 0.00087 20.2 0.8 3 23 875 895 874 895 0.98 11 13 0.00076 0.055 14.5 1.7 1 23 912 934 912 934 0.97 12 13 1.7e-06 0.00012 22.8 0.7 1 23 940 962 940 962 0.98 13 13 0.00021 0.015 16.2 5.2 1 23 968 991 968 991 0.98
Sequence Information
- Coding Sequence
- ATGGAGATAGAAATTGATCCTCTAAGCACGGAACTAATAACTTACAATGAACTCCAAGAAAATAACGACAATCAAAGTATAGAAATAAAAGTCGAGAGAATGGTAGAAGACACGCTGGAATATGAATCCATAGTCAAGTCTGAAGTGACAAGCACTGAGACCAACGCAGATATAGTTCAGGATTACCAATTCAACGAACCAGGGTCAACAGCGGTAAAAGAAGTTGGCTTGGATCAAGAAAAAGAAGATAAACCAATTGCAAATGTAAAAGATAAAAAAAGAAAAGAGAAAAAGATTGCACCAAAAAAGAAAAAGAGAGTCTACAATCATAAAATAAACGAAGATATACAAGAGGAGGAAAATCCCAACGGAGTCCTGTACTACGCCTGCTCAGTCTGTGAAGTCAAATACACTACAATAGAAAGATTATACAACCATGTACTCGGACATAAAAACCGTCTAACTAGTTGGGATCTGCGCATCAAGAACCTAAAACAAAAAAAGAAACGTAAAAAAGAATTAAAACGTCTTAAAAAAGCACAAATCAAACAAGAAGACATAAAAATTGAGGTGGAACTGGAGCTAGCGACGACTATATCCGAATTTGTAGAGAATTATACAAAAAACGGTCCTGATTTTGTTAATGCAAACCAAAGTAGCAGTGCACAAGACAATGTTCAAAGCCAAAATACGAGTTTACCAAGTAATGACGGAGGCCAAATTACAAGTTTACCAGGAAACGAAGTAAGCCAAAATACCAGTTCACCACTTAATATTAACCAAACAATGAAGAAAGAAAAACCTCTAACTAAGAAAGAAAAAGATAAAAAGATGAAGGAAGACAAAAACGGTGTTTGCAACACCGAACTGGATGAAACACAACGGGAAGCACTGAATCTGGAGAAGATATTCAAGTGTGGCCACTGCAATAAACAGTTCCACTTAGGATACTACTTAAAACTGCATGTTAGAAGTCATACTGGCGAGAAGCCGTACAGCTGCGAGGAGTGTGGCATCTCCTTCATAACGGCCAGCAAGCTGGGACGGCACCGCAAGCGCACTCACCTCTCCGTGCGGTTCGTGTGCCGCGTTTGCCGCCGCCCCTACACGCGGCTCGAGTTCCTCACGCGGCACTTCAATAAGCAGCACCAGGCTGACAAGATCGAGGGGGAGCCCTACGACTATAACGCGATCCTGCCGTACCTCAAGGAACTGGAAGAGGAATTGGAGCAGAAGAAAAAGAAAGAGGCTGAAGAGGCTGTGAAGCGTGAAGACGTGAACTTTAGCTCGGCTCTGTTCCACACGGACGGGATTGACCTCAAGCCCAAGGCCGAAGAGCTATGGGGCTTCAACGGGGACGAAATCAAGCAGGAAGATTGTGAGGTCAAAGAGGAAGTGAAGATTGAACTGCCAGACATCCCAGACGAGACGGGCCAGGAGGATAGCTTCACGTACGACGGGTTCGGGGACGTGCCGGCAGACGGGCCGGCTGACGGGCCGACTGACGGGCCGGCTGACGGGCCGGTGGCCAAGGACGGGCCGGCAAAACTCAAGGACGAGGATCAAACGGACGACGAGTACTTCCCGTCAGACACATGGCTCCCGTCCCCCTCGCCGCCGCCCTCGCCCCCGCCCAAGCCGGCGAAGGGCAGGCGAAAACGCTCCCTGAAGCCCGGCAACACGGCCGGGAATCCCCTACAGTGCAGCGTCTGCAAGAAAGTCGTCAGTACGGCCTCGTATCTGAGGATCCACATGAGGACCCACACTGGGGATAAACCGTTCAAGTGTTACTTGTGCAGCAAAAGCTTCATCACGTCCAGTAAGAGGAACCGGCACGTGATGACGCACAGTAATTGGGAGGAAGAGTGCAAGGACAAATTGGAAAATGGCGCAAACGCCGAAGTTAAAGAGGAGCCAGACGAAGACGATAAAGTGCTGCTGAAGCTGGCGAAGAAGTCGCGACTCCCGCGCAGGGCGAAACGGACGCTCGAGAAACTCTCCATGGCGGAGAAACGAGACCGGAAGAAGCCGTTCGCCTGCCGCTGTTGCTGCTCTAGATTCGGCTACCCGGAGGCTCTGCAGCTTCACATGCATTCTCACCAGAGCGGGGAGAAGCCAGGCGGCGCTGGTGACCCTCCGAAAGATGGCTACATGTGCCGCTTCTGCCTCGAGGTCTTCGAGCAGGACGACCAAGGGCGCCAGCATGAACTGAGCCACGAGGGCCCGAAGCCCTACTTGTGCACCATCTGCGGCCGCACATACAAGAAGAAGGAAACTATGGTGTACCACCGGCGTCACCACGATGCACCCAATAAGTACCAGTGCGACGTGTGTCCGAAAACGTTCAACCTACTCTGCAAGCTGCAGAGACACCTCCACAGCCACCGGCCCGGGAAATTTGTCGTCCGCTACGAATGTCCAGTGTGCGCCCACATCTTCAATACTCGGTACCACATCGAGATGCATCTCACCACGCACGAAAAGGAAGGAGTAATCCTGCAAGAGAACCGCGGTCAGATCATAGCCATGGTGATGCAGAACGCGCGAAAGATCCCCCTGGAGACGGACAAAGCCACAAGCAGCCTCAAAAACCTAGTGCCCACGGACGAGCGATCGCGAATCTGCAACATCTGCGGCGAGATATTCAGCCACTTCTACGACTTAGAGCAGCACCTGAAGACCCACGGATCCACATTCTCCGTAACAGGTCACGAGGACATGGACGAGCGGAAGTACATATGCCAGATCTGCAACAAAGGCTTCAAGCTCAGCTACTACTTGAAGCTACACAGTTACACTCACACGAAGGAGAAACCGTTCGTATGTCAGCAGTGCGGCAAAGGTTTCATCACTAGAGGTAAGCTGAAGCGCCACTTGGAGACGCACACAGGTCTGAAGAAGTTTCAGTGTCACATATGCTGCAAGTACTTCACTAGACCGAGTTATCTCAGGATACACGTGAGGACGATACACGGGAATCAGGACTATAATTTTAAGCAGGATGTCGACTACGAGATGGGGCATCTGGCTATGGGCGACGATGATGGTATGCAGGTCGAGTCGCACGGCCACCTCTAA
- Protein Sequence
- MEIEIDPLSTELITYNELQENNDNQSIEIKVERMVEDTLEYESIVKSEVTSTETNADIVQDYQFNEPGSTAVKEVGLDQEKEDKPIANVKDKKRKEKKIAPKKKKRVYNHKINEDIQEEENPNGVLYYACSVCEVKYTTIERLYNHVLGHKNRLTSWDLRIKNLKQKKKRKKELKRLKKAQIKQEDIKIEVELELATTISEFVENYTKNGPDFVNANQSSSAQDNVQSQNTSLPSNDGGQITSLPGNEVSQNTSSPLNINQTMKKEKPLTKKEKDKKMKEDKNGVCNTELDETQREALNLEKIFKCGHCNKQFHLGYYLKLHVRSHTGEKPYSCEECGISFITASKLGRHRKRTHLSVRFVCRVCRRPYTRLEFLTRHFNKQHQADKIEGEPYDYNAILPYLKELEEELEQKKKKEAEEAVKREDVNFSSALFHTDGIDLKPKAEELWGFNGDEIKQEDCEVKEEVKIELPDIPDETGQEDSFTYDGFGDVPADGPADGPTDGPADGPVAKDGPAKLKDEDQTDDEYFPSDTWLPSPSPPPSPPPKPAKGRRKRSLKPGNTAGNPLQCSVCKKVVSTASYLRIHMRTHTGDKPFKCYLCSKSFITSSKRNRHVMTHSNWEEECKDKLENGANAEVKEEPDEDDKVLLKLAKKSRLPRRAKRTLEKLSMAEKRDRKKPFACRCCCSRFGYPEALQLHMHSHQSGEKPGGAGDPPKDGYMCRFCLEVFEQDDQGRQHELSHEGPKPYLCTICGRTYKKKETMVYHRRHHDAPNKYQCDVCPKTFNLLCKLQRHLHSHRPGKFVVRYECPVCAHIFNTRYHIEMHLTTHEKEGVILQENRGQIIAMVMQNARKIPLETDKATSSLKNLVPTDERSRICNICGEIFSHFYDLEQHLKTHGSTFSVTGHEDMDERKYICQICNKGFKLSYYLKLHSYTHTKEKPFVCQQCGKGFITRGKLKRHLETHTGLKKFQCHICCKYFTRPSYLRIHVRTIHGNQDYNFKQDVDYEMGHLAMGDDDGMQVESHGHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01543186;
- 90% Identity
- iTF_01543186;
- 80% Identity
- -