Yror001178.1
Basic Information
- Insect
- Yponomeuta rorrellus
- Gene Symbol
- ZNF131
- Assembly
- GCA_947308005.1
- Location
- OX371023.1:1329350-1377064[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.23 17 6.7 0.5 1 23 183 206 183 206 0.92 2 25 0.0065 0.47 11.5 4.2 2 23 214 235 213 235 0.96 3 25 0.76 55 5.0 3.3 1 23 239 262 239 262 0.95 4 25 0.065 4.7 8.4 0.7 2 23 267 289 267 289 0.95 5 25 0.00045 0.033 15.2 1.6 1 23 292 314 292 315 0.95 6 25 0.015 1.1 10.4 2.3 2 23 321 343 320 343 0.91 7 25 0.0044 0.32 12.1 3.0 3 23 353 374 352 374 0.96 8 25 0.0066 0.48 11.5 2.3 1 23 385 408 385 408 0.90 9 25 0.043 3.1 9.0 0.4 2 23 415 437 415 437 0.93 10 25 1.3 97 4.3 0.1 3 17 448 462 447 463 0.88 11 25 10 7.2e+02 1.5 0.1 2 23 665 687 664 687 0.87 12 25 3.4e-05 0.0025 18.7 0.5 1 23 694 716 694 716 0.96 13 25 0.74 54 5.1 1.2 1 21 720 740 720 741 0.90 14 25 0.00038 0.028 15.4 0.9 1 20 758 777 758 779 0.94 15 25 0.051 3.7 8.7 6.3 1 23 783 805 783 806 0.95 16 25 2.4e-05 0.0017 19.2 2.3 2 23 813 834 812 834 0.97 17 25 0.77 56 5.0 2.1 1 19 843 861 843 864 0.93 18 25 7.7 5.6e+02 1.9 3.6 2 23 877 899 877 899 0.92 19 25 9.1e-05 0.0066 17.4 0.6 1 23 906 929 906 929 0.94 20 25 0.0007 0.051 14.6 3.9 1 23 939 961 939 961 0.97 21 25 0.014 1 10.5 0.7 1 23 967 990 967 990 0.96 22 25 0.016 1.1 10.4 1.2 1 22 1005 1026 1005 1028 0.89 23 25 5.5e-05 0.004 18.1 0.2 1 23 1034 1057 1034 1057 0.94 24 25 0.3 22 6.3 0.3 1 10 1065 1074 1065 1079 0.91 25 25 2e-05 0.0014 19.5 0.7 1 23 1128 1151 1128 1151 0.93
Sequence Information
- Coding Sequence
- ATGGTCATATGCTGGGAGTGTCGGGCTACGCTGCAGAATATTGTCACGTTCCAGCATAAGGTCCAAAATGCTGCTATTTCACTAACGCAGGGCTATAACAGCACAGAATCACTCTCAAACCTGACCACGACCCTTAATACCGGATTCCATCAGACACTACACTACGAATCGGACGATGACGACGACGCTGACTTTAAAAGTGAAATGCCCATCGAACAGTTCCTCTACGATGCTGAACCAGACATCATCAAACTAGAATCTAACAAAATAAAACTGGAAGCAAACATGAAACTGGAATCAAGCAACGTGGAACTTGATTCCAGTGAAATTAAAAGCGAATCTGGTAAGAGAGTTAAAAAAGAGAAGAAAGATAAGCCTTTATGGGAGTTGAACAGAGAGGAAGAACTGAAAAAGCCAAAATTCAAATTCGTCGCTATTAAAAACGCGAGCAAAAAGGACATGTATAACCAAATTAGGATAACTCCCACAGAGCTGAAAGATTGCTTGTTGCAAGAACGTAACAGCACATATTACACTAGGAGGAATTACAAGTGTGAAAAGTGTATAATTGGATTTGGTACCAAGAAGGCTTTGTTAAAACACAATGCGTCAAAACATGCTAAGGAACTAGGTAAACTAATCTGCGACGTATGCAAGACTCGCTTCCACGGCAAATGCAACCTGGTCACCCACATGCGCAGCCACTACTTCATGTACGAGTGCAAACATTGCTCCTACACCAGCTACAACATGCGCAATCAACTTTGGCACTACAGGGCCCAACATTCTAGAGTGGCCGAGTGTCTGGTCTGCCAATTGCAGTTTGTCAATCGCAACGCGTTCTACAAACACTACCGCGAGCGGCACGAGAAATTTATCTGCGACTACTGCGGAGCCACTTACAAGATGCGATACAGTATCATCAACCATATCAGACGGCACCATTCAGGCGGTCGTGTCGAGTGTCAGATTTGCTCCAAGACATTCAAAAGCCACAAGGGCTATTGGCAGCACAAGACACTGCAGCACCCCACGCGTCAACTGGACCAGGCATACTGCGTGGAATGCGACAAACACTTCAAGCATCGCTACGCCTACATCGGACACATCAATCGGACGCACCGGCCCGCCAAGCCCGCTAAGAAAAGCAGACACCAGTGCCCGAGCTGCGAGAAGTCCTTCTCCAAAAACATCTACATGCAGAACCATTACGACTTCGTTCACCTGAAGGTCTACAAGAACAAATGCGATCCGTGCGGCAAGAAATTCCTGCGCCCCGCCGAACTAATCCGCCACAACCGTCAGACACACGAAGGCATTCCGGCGCCGAAAAACAAGCTTTGCTACATCTGTGGCCGGGGCTTCACGTACATAAAGTACCTACAAAGCTCAGCGCTGCTCCGCCTCTGCTGGGAGTGCCAAGCCCGGCTGCGCAGCGCCACCGAGTTTGTACGCAGCTCGCAGCAGTGTGTGCGAACACTAAAGGACTACTGGGCCTGTCCTACTGAGGCGTTCCCCCCATCGCAGTCTCGTCTCCTGCTGACCCAAACGGAACTGGTTGATGTAGCTCCAACAGCAGCCAAGCCGACCGAGCCACCCGAGCCTGAAACCAAGCAGCGGCCAATCGATGAGCTTGTGTGCCCGGTCAAAGTGGAATTTGACCCTGCGCAGGTCGAAAAACCGCCGACCGCCATCCCAGATAAACAAGAACCGTTGAAGGAGGAATCCGAGGCTCCAGAGAGGGACTTGGAGTTTGACACGGCTGGGTACACTTCCCCACAGTATGACAGTGACGATGACAGAGTGGTGGCCGACATCGTGCGCATGGCTGAAAAGCAACGGACGGTGAAAAAAAAGAAGGTCAAAACGACCCGCCAACGCGCCCCGAAGGACCCAAAAAACCCCAAGACCTACGAGGTGGTTTGGGCCTCCAACGAACAAGCCCTCAGTTGGTTTGAGGCAGAGCGGGGCGAGGCGACTGGCGAGGCGGTCTCTTGCGCTCAGTGCCGCGACACCTTCGCCTCGGATGAGGATCTGAGGTTGCATGAGGCGGAAAAACATGATGAGTCTGCTGGATCCTACATCTGCAATATATGTAAATACAGATTCGCAACGCAAGAGTTGCTAAAAAAGCATGTGGAAGAACACTTCCTGCTGTACAAGTGTAAAGTGTGTCAATATGAAACCAGGAGCCTGAGCCTCATACAGGGCCACAAAAAGCACTTGGGGGCCAAAGAGAAGGAACAAAGCGATGCTGAGAGCAACGGAAAGTACGAGTGTAAGAAGTGTAAGAGTAGTTTTAGTACGGCGCCACAGCTTCGGAAGCATCGAGCGAAGTGTAGCCTCTTCAAATGCGACTTCTGCGAGAAGGCGTTCACACACCGCACGTCCAAATACTCGCACATGGACCTACACCACAAACCGCTCCCGGAGGTGGAGTGTAAAATATGTAAAAAGAAATTCAAGAACAAGTACGCGATAAAGTCACACATGCAGAAGCACAGGAAAGATGCTAAAGGCGGTTTCTATTTTTGCAAGCTCTGCTCCACCGACTTCAAGAGCGCTCTTCAGTATAGGCAACACTTCTACAGGAAGGTCAAGCAAGATGGCCGCGTCGAGTTCCGGAACGAATGCACTCACTGCGACCTCAAATTCCTCACGCCCAAAAGGGTGCAGGAACACATAACCAGCTGCCATCTGATAAAGCGGGGCGCCTATCGCTGCACCAAGTGTCCCAAGTCCTACGTGCAGCAGAAGGCGCTCCAGTTGCACGCGGCGAGCAAGCACGGCCACAGCGCGGAGAAGAGACGCGAGCACATGTGTCACGTGTGCGGCCGCGGATTCACGTCCACTACCATCCTCAAGAACCACATGCGCTCTCACACCGGCGAGAAGCCCTACAAGTGTCAGCTGTGCCCGGCCGCCTTCGGGCACACCGGCTCGCTCTACACACATACCAAGTTGGTGCACAGACGGAAATTAAGCAAGCAGGGCGACACTGACACGCAGATGTTCCAGTGCTCGGTGTGCAACAAGGAGTTTGTCACCGAAGCTCGCTGGAAAAGCCACTACGATTTCTTCCACTTGAAGAAGTCCGAGTTCGCTTGCGACATTTGCAATAAGATATTCATATCGGCTTGGAACCTAAAAAATCACAAGACGATGCTCCACGGCGTGAACCGAACGAAGAGTTTTCCCTGCAACATATGCGGGAAGGAGTTCTTTGTATTAGATGTGCTCTTGTGCGCCGACCCTACACTTAAGCCCCTGTTTTACACACCAAATAAATCAAATAAAACCAACAATGAATACCCGTCCCATCGCCGGCAGAGAGTTGACGCCCTCAAGTCCCACAAACTCATCCACTCCGAGGAGCGTACCTTCATGTGCAGCGAGTGTGGGAAGACCTTCAAACAACAGGCGGCGCTCTACACACATAACAAGCTGGTCCACCGGGGCCTGAAGCGACCCCCCAACAAAACGCCCGCGCGTCGAGAGAAGGCCCAGACTAACGGAGAGGAGAAGTTTATACAGTAG
- Protein Sequence
- MVICWECRATLQNIVTFQHKVQNAAISLTQGYNSTESLSNLTTTLNTGFHQTLHYESDDDDDADFKSEMPIEQFLYDAEPDIIKLESNKIKLEANMKLESSNVELDSSEIKSESGKRVKKEKKDKPLWELNREEELKKPKFKFVAIKNASKKDMYNQIRITPTELKDCLLQERNSTYYTRRNYKCEKCIIGFGTKKALLKHNASKHAKELGKLICDVCKTRFHGKCNLVTHMRSHYFMYECKHCSYTSYNMRNQLWHYRAQHSRVAECLVCQLQFVNRNAFYKHYRERHEKFICDYCGATYKMRYSIINHIRRHHSGGRVECQICSKTFKSHKGYWQHKTLQHPTRQLDQAYCVECDKHFKHRYAYIGHINRTHRPAKPAKKSRHQCPSCEKSFSKNIYMQNHYDFVHLKVYKNKCDPCGKKFLRPAELIRHNRQTHEGIPAPKNKLCYICGRGFTYIKYLQSSALLRLCWECQARLRSATEFVRSSQQCVRTLKDYWACPTEAFPPSQSRLLLTQTELVDVAPTAAKPTEPPEPETKQRPIDELVCPVKVEFDPAQVEKPPTAIPDKQEPLKEESEAPERDLEFDTAGYTSPQYDSDDDRVVADIVRMAEKQRTVKKKKVKTTRQRAPKDPKNPKTYEVVWASNEQALSWFEAERGEATGEAVSCAQCRDTFASDEDLRLHEAEKHDESAGSYICNICKYRFATQELLKKHVEEHFLLYKCKVCQYETRSLSLIQGHKKHLGAKEKEQSDAESNGKYECKKCKSSFSTAPQLRKHRAKCSLFKCDFCEKAFTHRTSKYSHMDLHHKPLPEVECKICKKKFKNKYAIKSHMQKHRKDAKGGFYFCKLCSTDFKSALQYRQHFYRKVKQDGRVEFRNECTHCDLKFLTPKRVQEHITSCHLIKRGAYRCTKCPKSYVQQKALQLHAASKHGHSAEKRREHMCHVCGRGFTSTTILKNHMRSHTGEKPYKCQLCPAAFGHTGSLYTHTKLVHRRKLSKQGDTDTQMFQCSVCNKEFVTEARWKSHYDFFHLKKSEFACDICNKIFISAWNLKNHKTMLHGVNRTKSFPCNICGKEFFVLDVLLCADPTLKPLFYTPNKSNKTNNEYPSHRRQRVDALKSHKLIHSEERTFMCSECGKTFKQQAALYTHNKLVHRGLKRPPNKTPARREKAQTNGEEKFIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545074;
- 90% Identity
- iTF_01545074;
- 80% Identity
- -