Basic Information

Insect: Yponomeuta rorrellus
Gene Symbol: -
Assembly: GCA_947308005.1
Location: OX371022.1:7162457-7167549[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.034 2.5 9.3 1.1 1 23 118 141 118 141 0.94

2 28 2.1 1.5e+02 3.6 2.6 1 23 209 231 209 231 0.94

3 28 0.00062 0.045 14.8 1.0 1 23 235 257 235 257 0.98

4 28 0.082 6 8.1 1.7 1 23 264 287 264 287 0.91

5 28 1.1 82 4.5 4.6 1 19 293 311 293 316 0.88

6 28 1.5e-05 0.0011 19.9 3.6 1 23 324 346 324 347 0.96

7 28 0.00054 0.039 15.0 0.3 1 23 353 375 353 375 0.98

8 28 4.9e-06 0.00035 21.4 1.9 1 23 382 404 382 404 0.98

9 28 0.1 7.6 7.8 0.1 1 17 410 426 410 427 0.91

10 28 0.002 0.15 13.1 1.8 2 23 463 485 462 485 0.89

11 28 6.7 4.8e+02 2.1 0.1 2 23 511 533 510 533 0.90

12 28 2 1.4e+02 3.7 5.5 1 23 553 575 553 575 0.97

13 28 0.01 0.74 10.9 0.3 1 23 579 601 579 601 0.98

14 28 1.9 1.4e+02 3.8 2.9 1 19 638 656 638 661 0.90

15 28 2.7e-05 0.0019 19.1 2.6 1 23 669 692 669 692 0.98

16 28 0.0089 0.65 11.1 0.5 1 23 698 720 698 720 0.98

17 28 8.3e-07 6e-05 23.8 0.9 1 23 727 749 727 749 0.98

18 28 0.0029 0.21 12.7 4.1 1 23 754 777 754 777 0.95

19 28 2.7 2e+02 3.3 0.3 1 23 831 854 831 854 0.92

20 28 1.1 81 4.5 0.0 2 23 881 903 880 903 0.95

21 28 9.1 6.6e+02 1.6 2.3 5 23 929 947 925 947 0.86

22 28 0.00048 0.035 15.1 0.4 1 23 951 973 951 973 0.97

23 28 0.087 6.3 8.0 2.6 1 23 978 1001 978 1001 0.96

24 28 0.0022 0.16 13.0 0.7 2 23 1009 1031 1008 1031 0.95

25 28 0.00089 0.065 14.3 4.2 2 23 1039 1061 1038 1061 0.96

26 28 0.0032 0.23 12.5 6.2 1 23 1067 1089 1067 1089 0.95

27 28 9.7e-06 0.0007 20.4 1.1 1 23 1095 1117 1095 1117 0.98

28 28 0.011 0.79 10.8 3.5 3 23 1125 1146 1123 1146 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.034	2.5	9.3	1.1	1	23	118	141	118	141	0.94
2	28	2.1	1.5e+02	3.6	2.6	1	23	209	231	209	231	0.94
3	28	0.00062	0.045	14.8	1.0	1	23	235	257	235	257	0.98
4	28	0.082	6	8.1	1.7	1	23	264	287	264	287	0.91
5	28	1.1	82	4.5	4.6	1	19	293	311	293	316	0.88
6	28	1.5e-05	0.0011	19.9	3.6	1	23	324	346	324	347	0.96
7	28	0.00054	0.039	15.0	0.3	1	23	353	375	353	375	0.98
8	28	4.9e-06	0.00035	21.4	1.9	1	23	382	404	382	404	0.98
9	28	0.1	7.6	7.8	0.1	1	17	410	426	410	427	0.91
10	28	0.002	0.15	13.1	1.8	2	23	463	485	462	485	0.89
11	28	6.7	4.8e+02	2.1	0.1	2	23	511	533	510	533	0.90
12	28	2	1.4e+02	3.7	5.5	1	23	553	575	553	575	0.97
13	28	0.01	0.74	10.9	0.3	1	23	579	601	579	601	0.98
14	28	1.9	1.4e+02	3.8	2.9	1	19	638	656	638	661	0.90
15	28	2.7e-05	0.0019	19.1	2.6	1	23	669	692	669	692	0.98
16	28	0.0089	0.65	11.1	0.5	1	23	698	720	698	720	0.98
17	28	8.3e-07	6e-05	23.8	0.9	1	23	727	749	727	749	0.98
18	28	0.0029	0.21	12.7	4.1	1	23	754	777	754	777	0.95
19	28	2.7	2e+02	3.3	0.3	1	23	831	854	831	854	0.92
20	28	1.1	81	4.5	0.0	2	23	881	903	880	903	0.95
21	28	9.1	6.6e+02	1.6	2.3	5	23	929	947	925	947	0.86
22	28	0.00048	0.035	15.1	0.4	1	23	951	973	951	973	0.97
23	28	0.087	6.3	8.0	2.6	1	23	978	1001	978	1001	0.96
24	28	0.0022	0.16	13.0	0.7	2	23	1009	1031	1008	1031	0.95
25	28	0.00089	0.065	14.3	4.2	2	23	1039	1061	1038	1061	0.96
26	28	0.0032	0.23	12.5	6.2	1	23	1067	1089	1067	1089	0.95
27	28	9.7e-06	0.0007	20.4	1.1	1	23	1095	1117	1095	1117	0.98
28	28	0.011	0.79	10.8	3.5	3	23	1125	1146	1123	1146	0.97

Sequence Information

Coding Sequence: ATGAGTTTCTATGTAAGAATAAGTACACCCAACATTTGGCGATCACCGAGCCTTTGCATATCAGCTAAGAAACTGGTGAGACCTGTAAAGGGGGTACCTGTTTTACAAATTCCCATCAATCCGGCAAAGCCCGATGTAAGAACGATTACACGGCTAGTACGTAAAAAACCAGTTACGGCTACCAAAGGAAAACCCAAAGACAAACCGGAAGGCGAAACAGAAGACTCCACAAAGAAGCCGAAATCAGGCCTAAAGATTGACCGCCACCAAGGACGAAAATTCCGTGAAACAATACTGAGTCTGTGCCAACATTCGAATGCCAATATCATAAAGAAGATAGACCACGGTGGGTTCCACTGCTGCGTTTGCCCTGAAAAGTTCCCAGAGGCAGCCCAGTTAAAGGAACACTTCATTAGCATCCACAATAGGCAAGAAAAACTAAAAGAAATAGACTTTGCTGTCCTGAGCTGCTCGGCCAAAGTCGACGTCACGGGGCTCACCTGCGCACTGTGCCATCAAGAAGTTGACACACTGGAATTGATGCTCGATCACTTGTGTTTCGAACACCAGAAAACTGTGCACGAAGGATGCAACATCCTGCCGTTCAAATTTGACAAGCCAGGTTATTGCTGTGTGGCCTGCGAAGCCAAATTTGGCACATTCAAGTCGCTCCTGAGTCATATGCACGCACATTACAACAACTATATCTGCGACATCTGCCAATCGGGTTTCTATAATAAGGGCAGTATGCGGTCCCATCGGAGGACACACTCCTCTGTAAATGACACTTTCGCTTGCACGCATTGCTCCAAAACTTTCGTCACCGACATCAGCCGCGTGAACCACGAGAAGAGAGTCCACTTGGGGCTGAAACCCTACACATGCCACCATTGTCCGGAAAAGTTCCAGGATTACTACGAACGCAACGATCACTGCATAGAAGTCCACGGGTTGAAGGACATGGGCAACTTTCAGTGCCAAGCTTGCGACAAGAGATTTAAGCGCTCTTATGCGCTGAGAGAGCATGTGCGTAGACATCACCTCATGGAGCGGCGGTACGACTGCAACATCTGCGAGAAAAGATTCTGGAGCGCGCAGGAGCTGAATGACCATATGCTGAAGCACACGCGCGGCCCGGCCGAGTTCATCTGCGAGAAGTGCAATAAAGGATTCAGCAGGAAGAGAGTTTTGCAAAAGCACATGCAGTCCCATTACCCGGTGGCGCAATACGCCTGCGAAGCTTGCGAAAAAACGTTCACACAGAAGGCTGGTCTTACCACAGTAATAAAAAACCGCTACAATGCCAAGAGATATCGTGAAACACTGACAAGTCTATTACTATTCTCGAATGCCAATCTCATCAAGAAGATAGATCACGGCGGATGCCACTGCGTGGTTTGTCCAAAGAAGTTCTCTGATGCTGCCGATTTGAAGGAACACTTCAACGAACTTCACTCCCGCCCAGAGGCTCTTAAAAAAGTCAACTTCAAACATCTGCTCCACAAGGCTAAGGTTGACATTACGACGCTCGTCTGCACACTGTGCTTTGAGAAATTCGATGGCGTGGAACTGATCCTTGAGCACTTGCGCTTAGAGCACGAGAAAATGACGTACGACGGCTGCAATATCCTACCATTCACGTTCGACAATCCGGGCTACTGCTGCGTATTCTGCGAAAGCAACTTCGGGACGTTCAAATCATTGCTGAGTCACATGCACACCCATTACAATAACTACATCTGCGATATTTGCGAGACCGGCTTCTTCAGCAAACAAGCCATGTTGGCTCACAAGAAATCTCACACCGCCATTAAAAAGGCGTTCGCTTGCAAGCATTGCGAGCAGAAATTCGATACCGATTTGTGTCGTGTGCTTCACGAAAAGAGAATGCATCTAGGGATGAAGCCTTACTATACATGCTACTACTGCCCGGAAAAGTTCCAGGATTACTACCAACGGAATGACCACTGCATAGAAATACACGGCTTAAAGGACATGGGCAACTTTCAGTGTCGGGCCTGCGACAAGAGGTTTCGTCGTTCGTACATGTTGAGGCAGCACGTGCGTAAAGAGCATCTCATGGAGAAGATATACCCGTGCGGTGTGTGCGGAAAGAAAATGAAGAGTTCACAGGAGATCCACGACCACATGATGATGCACAAACGCGAGCCGACTGAATTTGTTTGCGGAGAGTGTGAAAAGACCTTCAACAGGAAGAGGACGTTGCAAATTCACATGCTGACACACTTTCCACCTCAACACGCGTGCGAGTTTTGCAACAAAGTGTTCTCTCGGAAGTCTGGGTTTACGTTTCACTTGAGGAAACAGCACGGTGAACAACGAATATCACCTAAAATGAGTCAAAACTCCGAAGATGAGACGATGACGAAGCCGAGGAAGGGCGAAGAATTGGACAAGCATCGTCAAaacgtccgcataattctacaatattccaatgctacacctataagatgtaaaaacggaatgggttacgtctgctctttttgcatggattcatttcctgaacccaaagaccttaaaatgcacacactagagcgacacgacgagaaaagcaaactgaaattcatgaaaaataaacctatgatgggctatgtagtcaagttagacataaccggtctccgttgcgaggtatgcgcacaaaacattgaaaccctcaatcagctaatcgaccatctcatcacagaacacgataaaaaaatacacactgacattaagaaccacattctgccatttaagttcggagacgacgtactacgctgcattttctgcgccagtcacttcagcaagttcaaaactttgcaggaacacatgaacgcgcactaccgtaactacgtctgccctgtctgcgacgcaggtttcgtcaacagaggatatctgcacgctcacaaatacaagcacagtacaggcgtgttcaaatgtgactactgcccaaaagttcttgagagtcacttcaagaaacaaaagcacgaaaaagtcgttcacgtacacaaaggaaagactagcaaatgcacttattgtggcgaaaaatttagcgtctactcgactaggaacgagcatatggtaaaggtgcacggcgcaaagcctctagtgctgaagtgccaagcctgtgacaagactttcagcaaacgatgcgcgttgacaaggcacaccaagcgagaccatctcatggagcgaagacatgaatgcaccgattgcgataaaagatttttctcgaaaaaacagttgtgtgagcactctgcgaaacacagcggccaaaaaaacttcacgtgtgatgtctgcgctaaatcttactctagaaaaaccactcttagagaacacttaagaatccacagtaatgatcgcaggttcggctgccagtattgttcgcagacgttcatacaaaagtgtagtctaaaaggacatttgaagtcACGGCACAGTGTTTTTGAATAA
Protein Sequence: MSFYVRISTPNIWRSPSLCISAKKLVRPVKGVPVLQIPINPAKPDVRTITRLVRKKPVTATKGKPKDKPEGETEDSTKKPKSGLKIDRHQGRKFRETILSLCQHSNANIIKKIDHGGFHCCVCPEKFPEAAQLKEHFISIHNRQEKLKEIDFAVLSCSAKVDVTGLTCALCHQEVDTLELMLDHLCFEHQKTVHEGCNILPFKFDKPGYCCVACEAKFGTFKSLLSHMHAHYNNYICDICQSGFYNKGSMRSHRRTHSSVNDTFACTHCSKTFVTDISRVNHEKRVHLGLKPYTCHHCPEKFQDYYERNDHCIEVHGLKDMGNFQCQACDKRFKRSYALREHVRRHHLMERRYDCNICEKRFWSAQELNDHMLKHTRGPAEFICEKCNKGFSRKRVLQKHMQSHYPVAQYACEACEKTFTQKAGLTTVIKNRYNAKRYRETLTSLLLFSNANLIKKIDHGGCHCVVCPKKFSDAADLKEHFNELHSRPEALKKVNFKHLLHKAKVDITTLVCTLCFEKFDGVELILEHLRLEHEKMTYDGCNILPFTFDNPGYCCVFCESNFGTFKSLLSHMHTHYNNYICDICETGFFSKQAMLAHKKSHTAIKKAFACKHCEQKFDTDLCRVLHEKRMHLGMKPYYTCYYCPEKFQDYYQRNDHCIEIHGLKDMGNFQCRACDKRFRRSYMLRQHVRKEHLMEKIYPCGVCGKKMKSSQEIHDHMMMHKREPTEFVCGECEKTFNRKRTLQIHMLTHFPPQHACEFCNKVFSRKSGFTFHLRKQHGEQRISPKMSQNSEDETMTKPRKGEELDKHRQNVRIILQYSNATPIRCKNGMGYVCSFCMDSFPEPKDLKMHTLERHDEKSKLKFMKNKPMMGYVVKLDITGLRCEVCAQNIETLNQLIDHLITEHDKKIHTDIKNHILPFKFGDDVLRCIFCASHFSKFKTLQEHMNAHYRNYVCPVCDAGFVNRGYLHAHKYKHSTGVFKCDYCPKVLESHFKKQKHEKVVHVHKGKTSKCTYCGEKFSVYSTRNEHMVKVHGAKPLVLKCQACDKTFSKRCALTRHTKRDHLMERRHECTDCDKRFFSKKQLCEHSAKHSGQKNFTCDVCAKSYSRKTTLREHLRIHSNDRRFGCQYCSQTFIQKCSLKGHLKSRHSVFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545072;
90% Identity: iTF_01545072;
80% Identity: -