Basic Information

Insect: Yponomeuta rorrellus
Gene Symbol: -
Assembly: GCA_947308005.1
Location: OX371022.1:7097487-7102695[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.04 2.9 9.1 2.3 1 23 73 95 73 95 0.95

2 33 1.5 1.1e+02 4.1 0.1 2 23 121 143 120 143 0.95

3 33 0.0013 0.095 13.8 1.6 1 23 165 187 165 187 0.99

4 33 0.0088 0.64 11.1 0.5 2 23 192 213 191 213 0.92

5 33 0.15 11 7.3 0.3 1 23 217 240 217 240 0.89

6 33 0.046 3.4 8.9 4.2 2 23 247 269 246 269 0.96

7 33 0.091 6.6 7.9 0.7 2 23 277 299 276 299 0.94

8 33 5.6e-05 0.0041 18.0 2.9 1 23 305 327 305 327 0.97

9 33 0.0028 0.2 12.7 2.2 1 23 333 356 333 356 0.98

10 33 0.017 1.3 10.2 4.5 1 23 428 450 428 450 0.96

11 33 0.086 6.3 8.0 0.1 2 23 476 498 475 498 0.96

12 33 0.017 1.2 10.3 2.3 1 23 520 542 520 542 0.98

13 33 0.0098 0.71 11.0 0.3 2 23 547 568 546 568 0.92

14 33 1 74 4.6 0.4 1 23 572 595 572 595 0.82

15 33 0.014 0.99 10.5 3.7 2 23 602 624 601 624 0.95

16 33 0.00059 0.043 14.8 1.3 2 23 632 654 631 654 0.95

17 33 7.7 5.6e+02 1.9 0.1 1 17 660 676 660 677 0.90

18 33 0.04 2.9 9.1 1.8 1 23 711 733 711 733 0.99

19 33 0.021 1.5 10.0 0.2 2 23 762 784 761 784 0.94

20 33 0.0035 0.25 12.4 2.1 2 23 805 827 804 827 0.95

21 33 0.0023 0.17 13.0 4.0 1 23 832 855 832 855 0.95

22 33 0.018 1.3 10.2 2.4 1 23 860 883 860 883 0.95

23 33 7.6 5.5e+02 1.9 0.1 2 23 886 908 886 908 0.90

24 33 0.11 8.3 7.6 0.5 2 22 915 935 914 935 0.94

25 33 0.18 13 7.0 0.3 1 23 987 1010 987 1010 0.89

26 33 0.66 48 5.2 0.3 3 23 1039 1060 1037 1060 0.91

27 33 0.084 6.1 8.1 0.6 3 23 1084 1106 1082 1106 0.96

28 33 0.00094 0.068 14.2 0.6 3 20 1113 1130 1111 1134 0.90

29 33 0.0076 0.55 11.3 0.8 1 23 1139 1162 1139 1162 0.97

30 33 0.0014 0.099 13.7 0.6 2 23 1168 1190 1168 1190 0.92

31 33 0.00011 0.008 17.1 4.0 1 23 1194 1217 1194 1217 0.97

32 33 0.00016 0.012 16.6 0.4 2 23 1224 1245 1223 1245 0.96

33 33 0.013 0.96 10.6 1.1 1 23 1251 1273 1251 1273 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.04	2.9	9.1	2.3	1	23	73	95	73	95	0.95
2	33	1.5	1.1e+02	4.1	0.1	2	23	121	143	120	143	0.95
3	33	0.0013	0.095	13.8	1.6	1	23	165	187	165	187	0.99
4	33	0.0088	0.64	11.1	0.5	2	23	192	213	191	213	0.92
5	33	0.15	11	7.3	0.3	1	23	217	240	217	240	0.89
6	33	0.046	3.4	8.9	4.2	2	23	247	269	246	269	0.96
7	33	0.091	6.6	7.9	0.7	2	23	277	299	276	299	0.94
8	33	5.6e-05	0.0041	18.0	2.9	1	23	305	327	305	327	0.97
9	33	0.0028	0.2	12.7	2.2	1	23	333	356	333	356	0.98
10	33	0.017	1.3	10.2	4.5	1	23	428	450	428	450	0.96
11	33	0.086	6.3	8.0	0.1	2	23	476	498	475	498	0.96
12	33	0.017	1.2	10.3	2.3	1	23	520	542	520	542	0.98
13	33	0.0098	0.71	11.0	0.3	2	23	547	568	546	568	0.92
14	33	1	74	4.6	0.4	1	23	572	595	572	595	0.82
15	33	0.014	0.99	10.5	3.7	2	23	602	624	601	624	0.95
16	33	0.00059	0.043	14.8	1.3	2	23	632	654	631	654	0.95
17	33	7.7	5.6e+02	1.9	0.1	1	17	660	676	660	677	0.90
18	33	0.04	2.9	9.1	1.8	1	23	711	733	711	733	0.99
19	33	0.021	1.5	10.0	0.2	2	23	762	784	761	784	0.94
20	33	0.0035	0.25	12.4	2.1	2	23	805	827	804	827	0.95
21	33	0.0023	0.17	13.0	4.0	1	23	832	855	832	855	0.95
22	33	0.018	1.3	10.2	2.4	1	23	860	883	860	883	0.95
23	33	7.6	5.5e+02	1.9	0.1	2	23	886	908	886	908	0.90
24	33	0.11	8.3	7.6	0.5	2	22	915	935	914	935	0.94
25	33	0.18	13	7.0	0.3	1	23	987	1010	987	1010	0.89
26	33	0.66	48	5.2	0.3	3	23	1039	1060	1037	1060	0.91
27	33	0.084	6.1	8.1	0.6	3	23	1084	1106	1082	1106	0.96
28	33	0.00094	0.068	14.2	0.6	3	20	1113	1130	1111	1134	0.90
29	33	0.0076	0.55	11.3	0.8	1	23	1139	1162	1139	1162	0.97
30	33	0.0014	0.099	13.7	0.6	2	23	1168	1190	1168	1190	0.92
31	33	0.00011	0.008	17.1	4.0	1	23	1194	1217	1194	1217	0.97
32	33	0.00016	0.012	16.6	0.4	2	23	1224	1245	1223	1245	0.96
33	33	0.013	0.96	10.6	1.1	1	23	1251	1273	1251	1273	0.96

Sequence Information

Coding Sequence: ATGAAATCAGAACTAACATTCACACAAGTTACGTTTCACGTTCTAGGTGCCACTGACAGTCAGAGGCCCCACGGGGGACATAGCCAAGAGGTCGACAAAATGACGCCCAACGTGGGGAAACTGTCTCCAACAAAAATATACAGACTGAGGAGGAAAAACGCCATCACAATATTAGAATCGTCCAACGTCATACCATTCAAGTGGCAGAGACAAACGTATCTTTGCTTCTACTGCCATAAGGCTTTTTACAAGACCGCGCCGTTGAAAGAACACACGGTGACTCACAAAACCTCTAGCATCTCATCGGCAGTAACGTACTTGAAAGGGGACGAGAACGTCAAGGTTGACGTCACGGATATCAAATGCGAACTGTGCAAAGCGGAAATGAGCGATTTGAACGCGCTAATAGACCACCTAAAGTCGCAACACGATAAACCGTTCGCGGAAGAGCACGGTTATGGCGTGATACCCTACAAACTTCGGGAGGATGAATTCAAATGTGCAATCTGCAGCAAAGATTTCCAGTATTACATTAAACTGAACCAGCATATGAATTCCCACTTCGGAAATCTAGTCTGTGAGACGTGCGGAAAGTCCTTCCTCAGTCAAAGTAGGCTTCGCAGTCACTCCCTAGGTCACGGCGCAAAGTTTGCCTGCAAAGAGTGTCCGGAGACCTTCCAATCGCTCAAGAAAAGGATAAACCACGAAGCCAGAGTTCACAACAAAAAGAAGACGCTGAAATGTCAAGTCTGCGACGAAACGTTCCAAACGTTTACGTCGAGACAGAAACATCACCGCGTGAAACACAATATAGGAGTGCCCGCGATTCATTGTCCCGTATGCGACAAGGACTTCCAAGCCATCAGTCGCATGCAGAGGCACTTGAAACAGGTGCACGTGAAAGAGAAAAACCACACTTGTTCGATGTGTGAACAGCGGTTTTTCGATGCATCTAATTTGCGCAAGCATATGGTTAAACACATCGGCGAGCGCACGTATAAATGCAATGAGTGCTGCAAGGCGTATCCGAGGAGGCAAACGTTGAGGGATCATATTATGCGCGTTCATAATAGAGAGAAGGGACACGCGTGCAGTGCCACTGACAGTCAAGGGCCCCACGGGGCACAGGGACAAGAGGCTAACACGCGCCAAAAGGTCGACAAAATAACGCTCAACGTGGGGAAACTAACTCCAACAAAAATATACAGGCTGAGGAAGAAAAACGCCCTCACAATACTAGAATCTTCTAACGTCATACCTTTCAAGTGGCAAAGGCAAACGTTCTTTTGCTTCTACTGCCACAAGGCATTTTACAAGACTGCCACGTTGAAAGAGCACACGGTGACTCATAAAACGTCTAGCGTCTCAACGGCAGTATCAAACTTGAAAGGGGACGAGATCGTGAAAGTCGACGTCACAGAAATCAAATGCAAACTTTGCAAAGCAGAAATTAGCGATTTGAACTCACTGATAGCCCACTTGAAATCGACACACGACAAACGTTTCGCGGAAGAGCACGGTTACGGAATAATACCCTTCAAACTGCGAGAAGAAGAATTCAAATGTGCAATCTGCAGTGAGGAATTTCACTATTACATCAAACTGAGCCAGCATATGAACTCACACTTCGGAAACTCGGTCTGTGAGACGTGCGGAAAGTCCTTTCTTAATCCAAGCAGGTTGCGAAGTCACTCGCTAGGTCACGGCGCAAAATTTGCCTGCAAGCTGTGCCCCGAGACCTTCCAATCTCTCAAGAAGAGGTTGGACCACGAAGCGAAAGTCCACAACAAAAGGAACATGTTGAAATGTCAAGTTTGCGACGAGACTTTCGAGACCTTTTCATTGAGACGCAAACATCACCGCCTGAAACACAACATAGGAGTCCCGGCCATACACTGTCCCGTTTGTAACAAGGAGTTCCCAACGAAAAGTCGGATGCAAAGCCACCTGAAACAGGTGCACGTGAAGGAAAGAAACCACCCGTGTGCTATGTGCGAGCTGCGATTTTTCGAGGCTTCACATTTGCATGTTAAACCGCGGAATACCAAGGCGTCATCAACGAAACGACGCAAGAACCTACAAATACTGTTCAACAACACAACTATTATACCCTTCAAATGGCGCGGAAAATACAGATGCTTCTACTGTAGCGAAAACATAACGGAATACAATGACCTCCGCAAACACACTTTGACACACGGAAAATGCTCTCTAGAGGACCACTCCATAAAAGTCATCAAAGGTGGCCACAACATGGAGGTCAAAATTGATATCTCTGCCATTACCTGCGAGAAATGCAACGAGACATTTCCGTCCTTTGATGAGATTGTGAACCATTTGACTGTAAAACACAAGCTTCAGTACGACAGCACTATCGAAACAGTCCTTGAGCCTTACAAGCTTGATGACCTGACTTGCCATCTTTGCCAAGAAAAGTTCACATATTTTGGCTACCTAGTGTCCCATATGAATAATAACCACCCCAAAAACTGTCATATTTGCGACAAGTGCGACCAGAAGTTCAATAAACGCAGGGACCTCTTCTCCCACATTAAGAACTATCACAGAGAAGGCGGCTACCAGTGCGAGTTATGCCCTCACAAGTTCACAACGCTAAATATATTGAGGAAGCATCAGGAGAACAGGCATCAAAGAAGATGCGAGGTGTGCCAGCTGAAACTTCCGTCGGCAGCACTGAAGCGTCGCCACGTGGCTTTAGAACACCCAGACGATGGTACTCTACAGTGTCGTCAGTGTAGGAAACAACTGAGAACTCCTCAAGGCTTACGAATGCACGTCAGACGATGTCGCCCTGATACAACCGCAGGGTCCGCAGATTCGGACACCGATGCCGACGACGCTACACTGCGACGGCAAAGCGTCCAGCAGATTAAGCAGAATATACTAACGGTCATAAACATGTCCACAGCAATACCTTTCAGTTTTTACAAGAACAAGTTCAACTGCTTTTTCTGCTCCGAGGACTTTGCTGACTCCGACTCTATGAGGGAGCATACTGTATTAGCGCATCCAGTTTGCGATATCAAATCTAAATGTATTAAAAAGTGTAGGGAATCCAATGTCACTGTTAAGTTAGATATCTCTTCGTTAGCCTGCAAAGTGTGTTTCGAATCCATGCCCGATCTTGACCATCTAATCAATCATTTGACAGAGAAACACGGTGCGAACTATGACAAATCTTTAAGCTCATCTCTGCAACCCTACCGACTTATAAAAGACCACATGGCGTGCCCGCACTGCCCCAACGAGGTGTTCCGTTTTTTCGGCACGTTGCTGAAGCACATAAACTCCAATCACACCAACAACAACATCATTTGCGTGTACTGCGGCCAGACGTTCCGAAAGGAGCAAAACTTACGCGTCCATATATGGCGACATCACAAAGAAGGCCAGTTCAAATGTACGATCTGTGACGCTGAGTGCACGATGCCATCCCGCCTTTACATGCACATGGCGAAAGTTCACGGTGTGAAAGCGGCTAAATGTAGCAAATGCGGCGAGAGGTTCGCCACGCAATATTTGCGTCAAAAACATTTGATCGACGCCCACAATTCGGGCCATAAGTGTTCCTATTGCGGCAAGCTCTTTGTCAGAAACTCGTTCATGAAAGACCACATTAGACGAACGCATTTGAAGGAGAAGAACGTGGAATGTTCCGTCTGTGGTATGAAGTTCTTCAATAATATCTTGTTGAGGCGTCACATGGTTAAGCATAGCGGAGAGAAGAATTTTCACTGCGACATCTGTGGCGAAAGGTTCTTTTGGCGCAAAGGGTTGGTTAGGCATATGGGACGGCATACAAAGCATCCTGCGGCGTCGATGTAA
Protein Sequence: MKSELTFTQVTFHVLGATDSQRPHGGHSQEVDKMTPNVGKLSPTKIYRLRRKNAITILESSNVIPFKWQRQTYLCFYCHKAFYKTAPLKEHTVTHKTSSISSAVTYLKGDENVKVDVTDIKCELCKAEMSDLNALIDHLKSQHDKPFAEEHGYGVIPYKLREDEFKCAICSKDFQYYIKLNQHMNSHFGNLVCETCGKSFLSQSRLRSHSLGHGAKFACKECPETFQSLKKRINHEARVHNKKKTLKCQVCDETFQTFTSRQKHHRVKHNIGVPAIHCPVCDKDFQAISRMQRHLKQVHVKEKNHTCSMCEQRFFDASNLRKHMVKHIGERTYKCNECCKAYPRRQTLRDHIMRVHNREKGHACSATDSQGPHGAQGQEANTRQKVDKITLNVGKLTPTKIYRLRKKNALTILESSNVIPFKWQRQTFFCFYCHKAFYKTATLKEHTVTHKTSSVSTAVSNLKGDEIVKVDVTEIKCKLCKAEISDLNSLIAHLKSTHDKRFAEEHGYGIIPFKLREEEFKCAICSEEFHYYIKLSQHMNSHFGNSVCETCGKSFLNPSRLRSHSLGHGAKFACKLCPETFQSLKKRLDHEAKVHNKRNMLKCQVCDETFETFSLRRKHHRLKHNIGVPAIHCPVCNKEFPTKSRMQSHLKQVHVKERNHPCAMCELRFFEASHLHVKPRNTKASSTKRRKNLQILFNNTTIIPFKWRGKYRCFYCSENITEYNDLRKHTLTHGKCSLEDHSIKVIKGGHNMEVKIDISAITCEKCNETFPSFDEIVNHLTVKHKLQYDSTIETVLEPYKLDDLTCHLCQEKFTYFGYLVSHMNNNHPKNCHICDKCDQKFNKRRDLFSHIKNYHREGGYQCELCPHKFTTLNILRKHQENRHQRRCEVCQLKLPSAALKRRHVALEHPDDGTLQCRQCRKQLRTPQGLRMHVRRCRPDTTAGSADSDTDADDATLRRQSVQQIKQNILTVINMSTAIPFSFYKNKFNCFFCSEDFADSDSMREHTVLAHPVCDIKSKCIKKCRESNVTVKLDISSLACKVCFESMPDLDHLINHLTEKHGANYDKSLSSSLQPYRLIKDHMACPHCPNEVFRFFGTLLKHINSNHTNNNIICVYCGQTFRKEQNLRVHIWRHHKEGQFKCTICDAECTMPSRLYMHMAKVHGVKAAKCSKCGERFATQYLRQKHLIDAHNSGHKCSYCGKLFVRNSFMKDHIRRTHLKEKNVECSVCGMKFFNNILLRRHMVKHSGEKNFHCDICGERFFWRKGLVRHMGRHTKHPAASM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545064;
90% Identity: iTF_01545064;
80% Identity: -