Basic Information

Insect: Yponomeuta rorrellus
Gene Symbol: -
Assembly: GCA_947308005.1
Location: OX371023.1:8122163-8123824[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0011 1.5 9.5 0.3 13 43 83 110 76 111 0.91

2 13 0.0039 5.2 7.7 2.4 5 38 107 135 106 141 0.85

3 13 0.082 1.1e+02 3.5 1.5 15 38 145 165 139 171 0.72

4 13 0.002 2.6 8.7 1.3 8 44 168 201 165 201 0.83

5 13 0.037 49 4.6 0.3 11 44 201 231 197 231 0.79

6 13 0.00078 1 10.0 2.0 12 44 232 261 227 261 0.85

7 13 2.2e-05 0.029 14.9 0.6 16 44 266 291 263 291 0.91

8 13 7.6e-07 0.001 19.6 1.4 4 43 322 358 319 359 0.93

9 13 0.0027 3.6 8.2 0.3 16 43 362 386 360 387 0.88

10 13 0.77 1e+03 0.4 4.6 18 44 394 417 386 417 0.79

11 13 0.12 1.5e+02 3.0 4.2 6 29 411 434 407 448 0.79

12 13 0.78 1e+03 0.4 4.6 15 44 478 504 463 504 0.75

13 13 1.5 2e+03 -0.6 0.1 18 28 510 520 508 528 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0011	1.5	9.5	0.3	13	43	83	110	76	111	0.91
2	13	0.0039	5.2	7.7	2.4	5	38	107	135	106	141	0.85
3	13	0.082	1.1e+02	3.5	1.5	15	38	145	165	139	171	0.72
4	13	0.002	2.6	8.7	1.3	8	44	168	201	165	201	0.83
5	13	0.037	49	4.6	0.3	11	44	201	231	197	231	0.79
6	13	0.00078	1	10.0	2.0	12	44	232	261	227	261	0.85
7	13	2.2e-05	0.029	14.9	0.6	16	44	266	291	263	291	0.91
8	13	7.6e-07	0.001	19.6	1.4	4	43	322	358	319	359	0.93
9	13	0.0027	3.6	8.2	0.3	16	43	362	386	360	387	0.88
10	13	0.77	1e+03	0.4	4.6	18	44	394	417	386	417	0.79
11	13	0.12	1.5e+02	3.0	4.2	6	29	411	434	407	448	0.79
12	13	0.78	1e+03	0.4	4.6	15	44	478	504	463	504	0.75
13	13	1.5	2e+03	-0.6	0.1	18	28	510	520	508	528	0.82

Sequence Information

Coding Sequence: ATGGAAGCAGTTTACATAAAACCGGAAGTACTGGAAGTCAAAGTGGAGACCAGCCAGGAGTCTTTTGACCCTTATCAAGATGTTGGTCAAGCATTTCAGACTGTAGATGTGAAGATGGAGCCCTATATGCAGGCATCTGAATCTTCAAGCTACATGGACATTTCGGAAATAAATGAAAACATAAATAATGGCCATGCCTCACATGCAAACCTAAGTGAAATTGACGCAAAGGTTTACGGCAATGGCAAAAGAAACAGAATACCATGCCCAAAATGCGAACAGACATTCAAGAACAGAGCCAACCTAAAGCAACATCTAAAATATGTGCATGCTACAGAGAATGATATTGTTGAATGCAAAATATGCTTCAGGACTTTCAAGTCTATATCCCATCTCCGATCACACAATTCATCTGTACACTTTGAGGAGGGAAAGGAGATAGTCTGCGAAACATGTGGCAAACATTTTGTCAGTCGTAAAAAGCTTAACAATCACATATTCTACTCACACCCGGAACCAACGGACCAAGTGAACTGTGCGACATGCTCCAAGACATTTAAAAGCAAATACAACTTGAAGGTCCACATGAGGCTCGTGCACCCAGCCACTGACAGCTCTGTCAAGTGCCCACAGTGTGACAAAGTGTTTAAAGTAGAAATGCTCATGTTGAGGCATCTGAAATGGAGTCACCCGACAGACGGAATGACTTACAAGTGCCAAATCTGTGGCAGAGTGTTGCCGTCCATATCCTGCTACAAAAAACACCTGGAAAATGTTCACAAGAGCTTAGAAGAGTTGGTCACTTGTGATTTGTGCCACAAAGTATTTAAATCTGTGACTAATCTGAAAATTCACTTGAAGATAGTACATTCAGACAAACCGTACGAGACTAAAGAATACAAGATGGGTCACTTGCCATGCTCGGAATGCGACAAACGGTTTTCCTCAAACACTGCCCTCCAGTGGCACTATGAACGGAACCACTCAGAGAATAGGCGCAGCACAACTTGCAATTTATGCCAAAAAGAGCTGTCAGATTTCAGTGGCCTAAAACGACACATGGGGATGGTGCATTCTGTTGAGAAGGCTACATGCTCCATCTGCCAAAAAGACTTCAAGTCTCCCATGAATCTGCAGAGGCATATAACGGTGACCCACGCTCCGCCGGAGGCTGCCCAGAACTGCGACATTTGTAAGAAAACCTTCAAATGCTCCATGCACTTGCGGGTACATGTAAACACTGTGCACAAAAAAGATGGAAAGAGCAACTGTGACATATGTAACAAAGAATTTGGCTCAAAGAAGTACATGCTGAAGCATAAAAAGACGCACATATTAACGCGAGAGTGTGCCTGCGGTGTCTGCGGTAAGCTCTACAGAAGCCCAGAGGATGTCAAAAAGCATTGTAAAAGGGTTCACAATAAAACGCCAATAGTTCACGAGTGTAATGTATGTCAAACTGCTTTTGCGACACAACAGTGTTTGACTGAGCATGTGACCCAGTTTCACAGAGAAGGTGCTCAACTGAACTGCTTCAAATGTGGTCGCGTATTCTCGCAAGAGGCTGATTTGCACTCTCACATTCTGGAATGCGGCAGTGACGATGTGCAGAAAGAGCCACTGGCTTTAGTCAAAATTGAAATGGACATTTTAGAGTCTTGA
Protein Sequence: MEAVYIKPEVLEVKVETSQESFDPYQDVGQAFQTVDVKMEPYMQASESSSYMDISEINENINNGHASHANLSEIDAKVYGNGKRNRIPCPKCEQTFKNRANLKQHLKYVHATENDIVECKICFRTFKSISHLRSHNSSVHFEEGKEIVCETCGKHFVSRKKLNNHIFYSHPEPTDQVNCATCSKTFKSKYNLKVHMRLVHPATDSSVKCPQCDKVFKVEMLMLRHLKWSHPTDGMTYKCQICGRVLPSISCYKKHLENVHKSLEELVTCDLCHKVFKSVTNLKIHLKIVHSDKPYETKEYKMGHLPCSECDKRFSSNTALQWHYERNHSENRRSTTCNLCQKELSDFSGLKRHMGMVHSVEKATCSICQKDFKSPMNLQRHITVTHAPPEAAQNCDICKKTFKCSMHLRVHVNTVHKKDGKSNCDICNKEFGSKKYMLKHKKTHILTRECACGVCGKLYRSPEDVKKHCKRVHNKTPIVHECNVCQTAFATQQCLTEHVTQFHREGAQLNCFKCGRVFSQEADLHSHILECGSDDVQKEPLALVKIEMDILES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545924;
90% Identity: iTF_01545057;
80% Identity: iTF_01546840;