Yror009200.1
Basic Information
- Insect
- Yponomeuta rorrellus
- Gene Symbol
- ttk
- Assembly
- GCA_947308005.1
- Location
- OX370995.1:7284321-7291720[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-16 4.4e-13 49.3 0.0 1 42 328 370 328 373 0.94 2 2 8.4 5.4e+03 -2.2 0.0 25 34 437 446 436 446 0.84
Sequence Information
- Coding Sequence
- ATGTCAATACAACAGTTCTGCCTGCGTTGGAACAACCACCAACCGAACTTCATCAGCGTGTTCACGACGCTTCTGAATACAGAGTCGCTGGTGGATGTGACCCTCGCCGCCGAGGGACGCCACCTACAGGCGCATAAAGTGGTGTTGTCCGCGTGTAGTGTCTACTTCCAGACGCTGTTTACGGAGAACCCCTCCCGCCACCCCATCGTCATACTCAAGGATGTTAAGTACTCAGATCTGCGTATCATGGTCGACTTCATGTACTATGGAGAGGTCAACGTCTCACAGGAGCAACTACCTCAGGTGCTGGAGACAGCCAAGATGCTAAAGATAAAAGGGCTGACAGAGATGCCAGAGTCGACGTCGCTGACCCGCTCGCAAGGCACCATGGCAGAGTTTCTGTCGCCGGGCGAGGCTGAGCAGCGGCATTCGGCCTCACCGGCCGCATCGCCAACCACCAAGCGTAGGAAGATCCGGCGACCGTCTGGCGGCGCAAACCCGCAGAGCGTGGACGAGCCGCGGCACGAACAACCGCACGGAGAATTGGCGCGCGGTGACAGTATCACGCTCAGTAGTTTGCCGCAGCAGCGGCGGCGACTGCACGAGTACCACGATGAGAGGACCGCCGACGCCGGCCAGCAGACGGAGGAGACGCCGAACAATATGGGGCACAGTGATGACCCACTGCTGATGGAGACCAACCCGCCGGGGCTGTCGCAAGGAGGACAATGGAGTATGATGGAGCACGGTTACCCGCGGTATAGCAACGCGTGCCTCGGCGGGGCGCTGCAGCAGGACGGGATGGGCTACATCGGCAACGTGATGTCCCAGCATATGGGCGTCGAGATGAACGATTACGGTGGCGTGGGGCTACCGGGCCCGTCGCCCGGGCCCTCGTGCGTGCCCGAGCAGCCGCCCCCGCCCGACCCGGCCGCCCCGCAGCAGCAACCGCCCAAGCGCCGCCGCACGTCCAACCCCCAGTCCGAGGAGAACTTCCAGCGCGCCCTAGAGGCCGTCCGCTTCGGCGGCATCGGCTTCTGCAAGGCGGCCCGCATGTTCGGCGTCAACAACCGGACCCTCTGGCTCGAGTACAAAAAGAAGGGCTACCCCAACAACAGGCCCAGCATAAAGAGCCGCATCAAGAGAGAACACACGACGCCCCCGCCCGAACACAAGGAGGAGGCGCCGCCGCCCGAACAGCAGATGGCGCTCCTCTGCCCGCCGCACCCAGTGCCCGTCGTCGGGTTCATCGACTCGCGGCCCGTCGACTTCCCGCTGCAGGGCATGGCGCATAACTCGCCCCTGAACCTACACGGGATTAATTTCAACACGATGCAATAG
- Protein Sequence
- MSIQQFCLRWNNHQPNFISVFTTLLNTESLVDVTLAAEGRHLQAHKVVLSACSVYFQTLFTENPSRHPIVILKDVKYSDLRIMVDFMYYGEVNVSQEQLPQVLETAKMLKIKGLTEMPESTSLTRSQGTMAEFLSPGEAEQRHSASPAASPTTKRRKIRRPSGGANPQSVDEPRHEQPHGELARGDSITLSSLPQQRRRLHEYHDERTADAGQQTEETPNNMGHSDDPLLMETNPPGLSQGGQWSMMEHGYPRYSNACLGGALQQDGMGYIGNVMSQHMGVEMNDYGGVGLPGPSPGPSCVPEQPPPPDPAAPQQQPPKRRRTSNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKEEAPPPEQQMALLCPPHPVPVVGFIDSRPVDFPLQGMAHNSPLNLHGINFNTMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545857;
- 90% Identity
- iTF_01545857;
- 80% Identity
- iTF_01546756; iTF_01543815; iTF_01544054; iTF_01543070; iTF_01544990; iTF_01542880; iTF_01544800;