Yror008938.1
Basic Information
- Insect
- Yponomeuta rorrellus
- Gene Symbol
- Jarid2
- Assembly
- GCA_947308005.1
- Location
- OX370995.1:1236916-1250875[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-19 3.8e-16 59.8 0.1 8 89 701 779 695 779 0.89
Sequence Information
- Coding Sequence
- ATGAAAAAAAAAGTCCACGCGCAGCGCAAGTTCGCCCAAGGCGCGTACATTCCGCCGAGCGCAGAGCGCCGTGCCGACACCACCCCAGTCAAAGATGCCGAGGACAAGCGGTTGGCTAAAAACATCATCGTCAACAAGGTATCCGCTAGGAACTTGCTGGACGTCGTCTCTATGCACAATCTTCACCAGCATGGCCAGCCGATAGTCCTAGTTGAACGGATGCCAGGCGCCCCTGTGAATAGTGTGGAAAAGCCAAAGACCAATGATCCCTCGGCTAAGCCTGCCAAGCCAGCTGTCAACGGAGTGAAGGAGCCCAAGGAAAAGGAGTGCACGTCCAAGTCTCCAAAGAGCCCTAAGAAAGTGAAAAGCACTTTGAAAAATCACAGGGAGATAATGCTACTACGATCGCGTTCGTCAAAGCGTCGAATAATGAAAACGACGCACAACGACACCAGGAAAGTTTGCGTTAGAAAACGACCCCAAACTCCCGCCAAGGTAGCTCCAAAGGAAGTTAGCCCGAAAAAGAAATGCGTCAGAAACAAATCTCCAGGCTTCTCCGATGACGACGACATGCCTTTGAATAAGATTACTAGAGAATTGGAGAAGGACGAGAAAGACGACCTGCCGCTCAGTAAGATGACTTATAAAAATAAGACCAACAGCAAATTGAAAGATACTGACAAAGATAAGGAAAGTACAACCAAAGATGACGCTGGCAAAAAACAGTTTTGTACGCTCAGATCTGCCGCGAATCGGTCTGCAGCGGAAGACGCGCTAGCAGCGACCACGCCAACGGATAATCCTGAAGAAAAGAAAGAAACTAAAACTGACGTAAATGTATCTCCACAGAACAAATCCTTGGAATCCAAAGACCAATCCTCAGATCCAGATAGCACAGTCAGCACAAAGCCTGACCGCAGTGGATCTTATTATGGAAGAAACAGGATAGAGAGGTGGATCGTAGACTCGACCGCCAGTCCTCCAGATCCTGAAGTGATGCGATCGCCAGCCGCACCGACGACGCCCGCCGCGCCCCCCACGCCCACCACGCCCACCACACCCACCACACCACCCACACCAACCACACCAACCACACCAATCACGCCAATCACGCCCGTCACACCATCAGCTCCTGAGCCTCACCACTTCAAAGTGCCGCAACCTCTCACTAAAAGACCAAAAGTGAAGCCCCCCGAGCCCAGAGCAGCACCAAAACCACAGCCTGTGCTCGACGTAACGCAGAATAGAAAACAACAAAAACCATCGCCATGCCCCTCAGAAAAGTTTTACGCAGCCAAAAACATACACACTGCAACCAAAAGTGACTTGGACAGCTTCTGCAAGAAGTGTATCACGTGCAGGAAACTCTCTATGTTCGTCAATTTGAAGCCTGAGAAGAGAGTGGTCACAAGAAACCAGGAGCCCAGCGACGTTTACGCGTTCGACGACAGCGAGCCACCGAACGAACAGCTCCTGGGGTACAATCCAAAGCGGCTTAAAACCAAAGACAGCACAAATATGTATTTGGATCTTCCGCAAAACAGCGCGCACATCGTCAAACTCGTGGAAGTGAAAATGCCCAACCAGGTCAAACCGATAATGAGGGCGCGTCTCGTGCCCAAGACGGAAGTTAGCCAGCAAGAGACGAACGAAAAGGAACCCTTAGCACCAAAGAAGAACGGTGAGAGACCATGTGCGAATATGATCCCAGCAAGTTCCAAGAGCAGTCAGAGCAATAACAGTTCAAACAATGAAGAAACTGATAGCTCTGATGAGAAATCCGACACCAAGCCATTGAGTAGTTACGTGAAAGCGACGGAGGCTACTGATACTCCAGCTGGGCCGTCGAAACCGGATGTCAAACCTGCGAAAACGGCCGAGGCGCCTACGTTCCATCCCACGGAGGCCGAGTTTGAGAACCCGATTGCCTACCTCGAGAAGATCACGGGCATAGCGTCCTCCTACGGGCTGTGCAAGATTGTGCCACCTCCAGGCTTCAAGCCCGAGTGTCATTTAGACGAAACGGTCCGGTTCACAGCCACCAACCAGTACCTCGGCAAGATGTTCTCGCGCTGGGGGCCGGCTGCGCGCGAGCTCTGCGCCATCAAGACGCATCTTGCTACTCAACGGGTGCTCTTCACTCGGGCGCCGCTGATCGACAGTATGGAGGTGAATCTGCCGAAGCTTTACCACATAGTGCAGAGGATGGGCGGCCTCAAGAAGGTCATCGAGAAGGAGCGGTGGTCGAAAGTGGCTGAGGAGCTCAACTACCAGAAGGGGAGTCTGGTGGAGAAGAAGCTGGACCAGGTCTACGTGAAGTATCTGCTGCCTTACGACACGTTGACTAATCGCGAACGCCAGAACATCCTCTCTAAGGTGGACCGCGAGTGGGAGAAGCGCTACAAGCGGATGTTGGAGCGCGCGCGCAGCCCGCTGCACAAGCAGCGGCAGCAGCTTGGCGAGGCTGCGGCGTCGACCTCCGACTCGGACGAGGACGACCCGCCGCCGGACGAGGCCGACGACTGCGTGTTGCGAGGCCGCCCCATGAGCATGGCCACCTTTGAAAAGGTGGCGAAGAGCGTGGTGCAGATGCACTTCCCGAGCGCGGGCGCCTCGGGGCCTTCCGGTGACGAGGTAGAGGAGGCCTACTGGCGGCTGGTGGTCTCCGGGAGCGACCACGTGTGCGTCAACACCGCAGCCGTCGACACGGGCGCCCGCGGGCTGGGCTTCACCAAGAACAAACTGGAGCCGGGCGCTAAGCATCCGTGGAACCTCAAGGTTCTAAGCAATAGCTCTGGGTCGGTGCTGCGGTCGCTGGGTCCAGTGCTCAGCGTTACCGTGCCCACCCTCCACCTGGGAATGGTCTTCAGCACGAGCTGTTGGCACCGCGACCCTCATGGACTGCCATGGCTCGAATACCACCACGCCGGCCCGCCCAAAATATGGTACGGGATCCCCGACGAGCAGAGCGATCGTTTCCGCGGCGCCGTCGAAGCCCTGTGCCCCGCTTACTGCCAGAACAAAAGCATCTGGCTTCCCTCCGACATCACAATGATCCCACCACACCTGCTCAACGAAAAAAACGTGGCGCTTTCCAAACTCGTCCAGCATCCTGGAGAATTCGTCGTCATATTTCCAAAGGCCTACAGCTGTTCAATATGCACGGGGTATACGATATCTGAGAGCGTCTACTACGCGCCGCCCTCTTGGCTCAACACTGTACAGAATGACTTCCAGGTTGGTGACTCAATTTGTACCTTGACATTCAAGAAATAG
- Protein Sequence
- MKKKVHAQRKFAQGAYIPPSAERRADTTPVKDAEDKRLAKNIIVNKVSARNLLDVVSMHNLHQHGQPIVLVERMPGAPVNSVEKPKTNDPSAKPAKPAVNGVKEPKEKECTSKSPKSPKKVKSTLKNHREIMLLRSRSSKRRIMKTTHNDTRKVCVRKRPQTPAKVAPKEVSPKKKCVRNKSPGFSDDDDMPLNKITRELEKDEKDDLPLSKMTYKNKTNSKLKDTDKDKESTTKDDAGKKQFCTLRSAANRSAAEDALAATTPTDNPEEKKETKTDVNVSPQNKSLESKDQSSDPDSTVSTKPDRSGSYYGRNRIERWIVDSTASPPDPEVMRSPAAPTTPAAPPTPTTPTTPTTPPTPTTPTTPITPITPVTPSAPEPHHFKVPQPLTKRPKVKPPEPRAAPKPQPVLDVTQNRKQQKPSPCPSEKFYAAKNIHTATKSDLDSFCKKCITCRKLSMFVNLKPEKRVVTRNQEPSDVYAFDDSEPPNEQLLGYNPKRLKTKDSTNMYLDLPQNSAHIVKLVEVKMPNQVKPIMRARLVPKTEVSQQETNEKEPLAPKKNGERPCANMIPASSKSSQSNNSSNNEETDSSDEKSDTKPLSSYVKATEATDTPAGPSKPDVKPAKTAEAPTFHPTEAEFENPIAYLEKITGIASSYGLCKIVPPPGFKPECHLDETVRFTATNQYLGKMFSRWGPAARELCAIKTHLATQRVLFTRAPLIDSMEVNLPKLYHIVQRMGGLKKVIEKERWSKVAEELNYQKGSLVEKKLDQVYVKYLLPYDTLTNRERQNILSKVDREWEKRYKRMLERARSPLHKQRQQLGEAAASTSDSDEDDPPPDEADDCVLRGRPMSMATFEKVAKSVVQMHFPSAGASGPSGDEVEEAYWRLVVSGSDHVCVNTAAVDTGARGLGFTKNKLEPGAKHPWNLKVLSNSSGSVLRSLGPVLSVTVPTLHLGMVFSTSCWHRDPHGLPWLEYHHAGPPKIWYGIPDEQSDRFRGAVEALCPAYCQNKSIWLPSDITMIPPHLLNEKNVALSKLVQHPGEFVVIFPKAYSCSICTGYTISESVYYAPPSWLNTVQNDFQVGDSICTLTFKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01543682;
- 90% Identity
- iTF_01542742;
- 80% Identity
- -