Basic Information

Insect: Yponomeuta plumbellus
Gene Symbol: Znf711
Assembly: GCA_947310845.1
Location: OX371220.1:9207007-9224103[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 7.2 6.7e+02 1.9 0.4 1 8 295 302 295 303 0.88

2 10 0.00092 0.086 14.2 1.7 2 23 322 344 322 344 0.97

3 10 0.032 3 9.3 2.8 2 23 349 371 348 371 0.96

4 10 0.00032 0.03 15.6 2.0 1 23 374 396 374 396 0.95

5 10 4.7 4.3e+02 2.5 2.6 6 23 402 419 402 420 0.94

6 10 0.048 4.5 8.8 0.2 2 22 430 450 429 454 0.91

7 10 0.00056 0.052 14.9 0.4 3 23 470 491 469 491 0.93

8 10 0.036 3.3 9.2 3.9 1 23 497 520 497 520 0.97

9 10 1.5e-05 0.0014 19.8 0.4 3 23 532 552 531 552 0.98

10 10 0.0001 0.0096 17.2 0.4 1 23 558 581 558 581 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	7.2	6.7e+02	1.9	0.4	1	8	295	302	295	303	0.88
2	10	0.00092	0.086	14.2	1.7	2	23	322	344	322	344	0.97
3	10	0.032	3	9.3	2.8	2	23	349	371	348	371	0.96
4	10	0.00032	0.03	15.6	2.0	1	23	374	396	374	396	0.95
5	10	4.7	4.3e+02	2.5	2.6	6	23	402	419	402	420	0.94
6	10	0.048	4.5	8.8	0.2	2	22	430	450	429	454	0.91
7	10	0.00056	0.052	14.9	0.4	3	23	470	491	469	491	0.93
8	10	0.036	3.3	9.2	3.9	1	23	497	520	497	520	0.97
9	10	1.5e-05	0.0014	19.8	0.4	3	23	532	552	531	552	0.98
10	10	0.0001	0.0096	17.2	0.4	1	23	558	581	558	581	0.95

Sequence Information

Coding Sequence: ATGAATTCTATCACAGCCCGCGTAAAAAGCGAGGTGGGGAATCCTCTACCGCAGTTCTGCAACACTTGCTTCAGTGTAGATCGTAGACTTTATCATGCTGGCCGTCTGCTTGATACCCTAAATACTCTGTTCAAGCATAGCAACACGGAGCTGGTATTCCAGCCTGTGTCAGTGTGTTGGGAGTGCCGCGCTGTCTTGCAGCGTGTGCGAGATTTCAAGTTGAATGCGGTCGCTGTTCAGCAGTTTCTCTCCCGCTACCAGTATGACCAGACACTTCGGTTGCCACCGCCGCTCTCCCGCCTGTCCAAAGTTCGCGCCAACACTGATATATGCATTAAACATGGCGTCAAACTGGACCGCGGGGTTCACAAAGGCACTCGGCTCATGAAAGATGAACCCCGACATGATACTGTGGAAATAGAGGTGGACGTCAAAAGAGAAGTGAAAGCTGACAGCGACGACGGCCACTGGCAAAACGAAGAGGCAGACTCCAAAGAACCCTCCCCCGGTCCTGCACCAATAGACGACTGGTACAGGAACCCATGCAAGCCGTCCGGATCACAAATCAAACAGGAGACGCCTGCACAAACTCCCTCAAAGACGGACGAACCTCAGATAAGCCACTGGTACAAGAAGCAAACGAAGCCCAAACCGTCTGAATACAAATACATCAGACGGATAGAGAGCAATCTTTGCATGGAGAAGTTCTATACTAAGTTTCCCATTGACAGCGTACAGTTGGAAGAGTTGTTAGAGGGCGACAGGCGAGATACACTCTTTACTGCGTTACCACATCGCTGTGATAGTTGCGTCTGCGGATGGAGGACTAAGAGGAACTTGGAGACGCACAATAAGTCCCGCCATGCTGAAAGCGCTGGCCCTTACCAATGCGACATTTGCACGAGAAGAATGTTGGGAAAGAACCGGATACGTCTGCACGTGACGGCGCACTATGTCGCGCGCAAGTGTAATATGTGCGAGTATAAAACCGCGACGCAGAGCAGTATGCGGCGGCACATATTGAAGAACCATTACAAATCAGTGGAGTGTCGGACGTGCGGCGCTTTCTTCCGTTCGACGCGCGACTTCCATTATCACTACAAGACGCTGCACCGACGCTTCGTCTGCGATCACTGTGGACGCAGCTGCGTCACAAGGGACGCCATCAAGAAACATCTCGTCCTCCACGGTCCGTACCTGTGCTGTGGGCGCCAGTTTCCCTCCTATCGTGCTATGAAGGACCACCGAACCCACCACCACGGATCGCGGGGTCCTCCGGAGCTGTCCTACTGCGTGGAATGCAACAAACAGTTCGAGAGCGTGGCGCGGTTCAAGAAACATTTGGCCACCGCCGTGGTCCACAGAGACCCGAATAAGCCTAGCCGCCCCTCAAAGAAACCGGCGCCTTGTCCGGAATGCGGGAAGGTTTACGCGCGAATGCACTCGATGCGTGACCACTATAACTTCGAGCATCTCGGCAGGAGCAACTACAGGTGTCAGGTGTGCGATGTGTACTTTCGCAACCGCACCATTTACAAGCACCATATGCTGTCGAAACACGAGCCGGGCTGGAAGCCGCCGCGAGACAAGATATGCTCTGAGTGCGGCCGAGGATTCTCTAGCTCCGAGATTCTCAAGAAGCATATTCGCACACACACGGGCGAGCGTCCTTACGCCTGTACGTATTGCGATGCGGCATTCGCTCAGAGCACAGCGCTAAAGTCACACGTCAAACACATCCACCTCAAGGAACGACGGACGCCCGCGTCGCAGATAAATCACACGAGTTCTTGA
Protein Sequence: MNSITARVKSEVGNPLPQFCNTCFSVDRRLYHAGRLLDTLNTLFKHSNTELVFQPVSVCWECRAVLQRVRDFKLNAVAVQQFLSRYQYDQTLRLPPPLSRLSKVRANTDICIKHGVKLDRGVHKGTRLMKDEPRHDTVEIEVDVKREVKADSDDGHWQNEEADSKEPSPGPAPIDDWYRNPCKPSGSQIKQETPAQTPSKTDEPQISHWYKKQTKPKPSEYKYIRRIESNLCMEKFYTKFPIDSVQLEELLEGDRRDTLFTALPHRCDSCVCGWRTKRNLETHNKSRHAESAGPYQCDICTRRMLGKNRIRLHVTAHYVARKCNMCEYKTATQSSMRRHILKNHYKSVECRTCGAFFRSTRDFHYHYKTLHRRFVCDHCGRSCVTRDAIKKHLVLHGPYLCCGRQFPSYRAMKDHRTHHHGSRGPPELSYCVECNKQFESVARFKKHLATAVVHRDPNKPSRPSKKPAPCPECGKVYARMHSMRDHYNFEHLGRSNYRCQVCDVYFRNRTIYKHHMLSKHEPGWKPPRDKICSECGRGFSSSEILKKHIRTHTGERPYACTYCDAAFAQSTALKSHVKHIHLKERRTPASQINHTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01544404;
90% Identity: -
80% Identity: -