Basic Information

Insect: Yponomeuta plumbellus
Gene Symbol: -
Assembly: GCA_947310845.1
Location: OX371220.1:4095601-4130861[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.015 1.4 10.3 0.3 1 23 220 242 220 242 0.98

2 10 0.031 2.8 9.4 2.2 1 23 249 271 249 271 0.94

3 10 0.56 52 5.4 4.1 1 23 304 327 304 327 0.84

4 10 0.00052 0.048 15.0 2.1 2 21 332 351 332 352 0.95

5 10 0.032 2.9 9.3 0.4 8 23 403 418 402 418 0.92

6 10 0.15 14 7.2 0.7 3 21 430 448 429 453 0.92

7 10 7.5e-05 0.0069 17.6 4.1 1 23 461 484 461 484 0.97

8 10 0.003 0.28 12.6 2.1 1 23 490 513 490 513 0.96

9 10 1e-06 9.6e-05 23.5 1.8 3 23 525 545 523 545 0.97

10 10 8.9e-05 0.0083 17.4 3.0 1 23 551 574 551 574 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.015	1.4	10.3	0.3	1	23	220	242	220	242	0.98
2	10	0.031	2.8	9.4	2.2	1	23	249	271	249	271	0.94
3	10	0.56	52	5.4	4.1	1	23	304	327	304	327	0.84
4	10	0.00052	0.048	15.0	2.1	2	21	332	351	332	352	0.95
5	10	0.032	2.9	9.3	0.4	8	23	403	418	402	418	0.92
6	10	0.15	14	7.2	0.7	3	21	430	448	429	453	0.92
7	10	7.5e-05	0.0069	17.6	4.1	1	23	461	484	461	484	0.97
8	10	0.003	0.28	12.6	2.1	1	23	490	513	490	513	0.96
9	10	1e-06	9.6e-05	23.5	1.8	3	23	525	545	523	545	0.97
10	10	8.9e-05	0.0083	17.4	3.0	1	23	551	574	551	574	0.95

Sequence Information

Coding Sequence: ATGAGTAGACTTCGAAGCTTTGGACACCACATTATTTTTACTTCTGAAAAGAAAAGGTTGAACAAAGGCGCCAGAGTGTGCTGGGAGTGCAAAGCTTTATTCCTGAGGTTCAACACATTTCGTCAACAAGTGAGCCAAGCACAGGCAACCTTCAAGTCACATACTAAGAAATCAAGAAATGTCCCATCCCTGTCCGCACTCTCCGTGTCTCACAAGGATTCCTTCGACCACGTCTATCTGGATGACGACGTCGTGAAGTTAGAGACGCTGCCCTTGGAACTGAAGGAAGAATTTAAGGACGATCTGAAAGCCGATCCCGAGTTGGTGGAGGCAGACATTCCGGCGGAATTGGTGTTCGCAACCCCGGGCACCAGCCTTGATGTCAGTTTTGAGGTCACACTTGAGAGGTCACTTGGAGAGGTGCCAACCTCGACCGGTGTCGAACCTGCGACCCTGCAATCAAGCTGTGAACAAGAAAAAGACTTGGAGTATTTGGACAGTGACGTTCAACACGACAGCACAGATTGGGTGGAACCGACCGCTACCAAGGAGGCGAAAAAGAGAAATAGCAGTCACTTGATCAAGAATGTTACCGAGGACGAGATGCTTCAAGCTAGGTACCTAGAAATGAACGCGACAGCTTATGTGAACGCTCAGTACAAGTGCGATAGCTGTGCCATCAAGTTCGTACTAGAAGACAAATACAAGGCACACATGGCCAAGCACGAACCGGAGGCCGGCAACTTTATGTGCCAGATATGCCGGCAGCGCTTCAAGCTACAATCAACGGCGAAGAAACATTTCCTTGATCACTACAGGTTCTACCAGTGCCGGGCCTGCGAATTCACCCACCATCGGCTGGGTACAGTACAGAGGCATTTCGAAAAAGAACACGAAGCGGTGCGCGTCTTCCAGTGCAATCTTTGCGATAAGGAGTTCCTTACGAGTTGCAGAAGAAAACACCACATACAGGCTGCTCACAAAGCGGCGGCCAAGTGTCCGCATTGCTTCAAAATATGCTCCAATCTGGGTAATCTCAAGATGCATCTGCGCATCGATATTCGTCAACACCGTCACGGCCACATCAAAGTGAAGGTAGTTCTATATGCGTTGCATTTACGCGGCCAGCGATACCCTGATCTGCTTCCTCAGTTCAATAGCAATCTCCGAAGCGAGTCGCACGTGCATAACACGCTCTCCGAGAGCAAAGATTTCGTTGGCCAAAAGAATCTGAGATCGCACATGCGCAGACACGATGCGCGCGCGCAGCCCGAAGAGCCGGCGTACTGCGCAGAGTGCGATGTGCGGTTCAAAAACCGTCTGATGTACCTCTCGCACTTGAAGTATTCGAGCCGGCATCTCACTGAGGAGAGCTACAGGTACCAATGCAACGAGTGTGACCGCAAGTTCACAATGAAACATTGCCTCGAGGAGCACATCGAACGGGAGCATTTGAAGATACTGCAGTACGCGTGCGAGCAGTGTGAACAGAAATTCGTGACCCGCCGCCAGAAAAGGCGTCACATCCACGTGGTGCACAAAATGGCGGCGCCCCCAGATCGCCGGGTGAACTGCAACGTATGCGGGAAACAGTTCGCGACCTCCAGTACCCTAAGGATCCACCATCGCACACACACAGGAGAGAGGCCGTACCACTGTTCCCTCTGTCCTATGCGGTTCTCGCAGAAGAGTACGCTCCGAACACACGTCAAGGGAAAACATAAGGAGCTCGGCGTTCTGCCTTGA
Protein Sequence: MSRLRSFGHHIIFTSEKKRLNKGARVCWECKALFLRFNTFRQQVSQAQATFKSHTKKSRNVPSLSALSVSHKDSFDHVYLDDDVVKLETLPLELKEEFKDDLKADPELVEADIPAELVFATPGTSLDVSFEVTLERSLGEVPTSTGVEPATLQSSCEQEKDLEYLDSDVQHDSTDWVEPTATKEAKKRNSSHLIKNVTEDEMLQARYLEMNATAYVNAQYKCDSCAIKFVLEDKYKAHMAKHEPEAGNFMCQICRQRFKLQSTAKKHFLDHYRFYQCRACEFTHHRLGTVQRHFEKEHEAVRVFQCNLCDKEFLTSCRRKHHIQAAHKAAAKCPHCFKICSNLGNLKMHLRIDIRQHRHGHIKVKVVLYALHLRGQRYPDLLPQFNSNLRSESHVHNTLSESKDFVGQKNLRSHMRRHDARAQPEEPAYCAECDVRFKNRLMYLSHLKYSSRHLTEESYRYQCNECDRKFTMKHCLEEHIEREHLKILQYACEQCEQKFVTRRQKRRHIHVVHKMAAPPDRRVNCNVCGKQFATSSTLRIHHRTHTGERPYHCSLCPMRFSQKSTLRTHVKGKHKELGVLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -