Basic Information

Insect: Yponomeuta plumbellus
Gene Symbol: -
Assembly: GCA_947310845.1
Location: OX371218.1:9256904-9285245[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.66 61 5.2 0.2 2 23 497 518 496 518 0.90

2 16 0.0082 0.76 11.2 0.1 1 23 528 551 528 551 0.95

3 16 1.6 1.5e+02 4.0 0.7 3 20 655 672 653 674 0.91

4 16 0.035 3.2 9.2 3.8 2 23 736 757 735 757 0.95

5 16 1.4 1.3e+02 4.2 1.5 1 23 769 794 769 795 0.90

6 16 0.00023 0.022 16.1 0.2 2 23 801 824 800 824 0.92

7 16 0.0075 0.7 11.3 0.3 1 23 830 852 830 852 0.93

8 16 0.0081 0.75 11.2 3.3 1 23 858 880 858 880 0.98

9 16 1.2 1.1e+02 4.4 0.0 2 22 891 911 890 911 0.91

10 16 0.036 3.3 9.2 0.1 1 23 1011 1033 1011 1033 0.97

11 16 5.2 4.8e+02 2.4 6.3 1 23 1040 1062 1040 1062 0.95

12 16 0.0013 0.12 13.7 1.8 1 23 1102 1125 1102 1125 0.95

13 16 0.002 0.18 13.1 0.4 1 23 1132 1155 1132 1155 0.97

14 16 0.02 1.9 10.0 0.2 2 23 1175 1197 1174 1197 0.94

15 16 1.2 1.1e+02 4.4 0.0 3 19 1209 1225 1209 1227 0.94

16 16 0.18 17 7.0 0.1 2 21 1235 1254 1234 1254 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.66	61	5.2	0.2	2	23	497	518	496	518	0.90
2	16	0.0082	0.76	11.2	0.1	1	23	528	551	528	551	0.95
3	16	1.6	1.5e+02	4.0	0.7	3	20	655	672	653	674	0.91
4	16	0.035	3.2	9.2	3.8	2	23	736	757	735	757	0.95
5	16	1.4	1.3e+02	4.2	1.5	1	23	769	794	769	795	0.90
6	16	0.00023	0.022	16.1	0.2	2	23	801	824	800	824	0.92
7	16	0.0075	0.7	11.3	0.3	1	23	830	852	830	852	0.93
8	16	0.0081	0.75	11.2	3.3	1	23	858	880	858	880	0.98
9	16	1.2	1.1e+02	4.4	0.0	2	22	891	911	890	911	0.91
10	16	0.036	3.3	9.2	0.1	1	23	1011	1033	1011	1033	0.97
11	16	5.2	4.8e+02	2.4	6.3	1	23	1040	1062	1040	1062	0.95
12	16	0.0013	0.12	13.7	1.8	1	23	1102	1125	1102	1125	0.95
13	16	0.002	0.18	13.1	0.4	1	23	1132	1155	1132	1155	0.97
14	16	0.02	1.9	10.0	0.2	2	23	1175	1197	1174	1197	0.94
15	16	1.2	1.1e+02	4.4	0.0	3	19	1209	1225	1209	1227	0.94
16	16	0.18	17	7.0	0.1	2	21	1235	1254	1234	1254	0.95

Sequence Information

Coding Sequence: ATGGTTGATGAGTGCCCCCCTCCTCTGATCCTCTGCATGGAAAATATGGCTGGTGAGGAGGTGGCTTTGCGCATTGAGCCTCAGGATGACTTCCAGACTTTCATTGATAAAGCCAAGGAGTCCAAGATATCCATATTAGATGGAGACATTAACTCCATAACACGAAACCAACCAGTCTCTCTCACTGACAACATTTACCAATACCTGCTCAACTCAAACCACGGCCTTAACACCGAGATGGGCTTAGCCTCGCAAACATTGAAACAAATACTGGAACCAAATAACGGAACCGATGATCTGGTATACATCCTCGACGACGGAACACAGATCAACGCTTCTCAAATACACTTTGACAACGAAGACCCGCCTGTAGATTTAACTGCGGAAAAGATACCCTTCGTCCAATACGCGGCAGACTTTGAAGAAGTTGAAGATAATATAGCCGAGGAGAACACCAGAAAGTACAATATAATTGACAGCCCCGTCTCTAGGTGGTCGAGCAGAAACGCTAGTCCGAAGTGTAGTTTTGTGAACAGTCTACCATTTAAGCTCGTTTGCAACAACACGTCTGGCTTCGAAGCGCAGTTCACGAAGTATTTAGAAAACGAGGCATCGAAAACCTACACGACTCTCAACCCGGTCACGGCGAGAAACAAGTCTCCAAGAAGTATCATCCGTGACAACTACAAAAATTACGACAACTACCAGAACTCTTCTATCAACTCTGATAATATACCGACATTCTCGCGTGAAGATGTCTTAAACATGTTCAAGGATTCCCCTGTCGCTGCCAGTCCCTACGAGAATATTATAGAGAAGCGTAAAAACGTCAGAAAGACTGACCCTTCCCGACTGGTGTTCAAGAAACACGATAAGAAACCAATTTCCTACGTAGACGTGGACGGAACTTTGGTCAGTCAGAGTGAAAGCCAAACCTGCTTCATTTGCACGAAGTTTGTTGAGAACAACGCTGAGAAATTGTATCTCTTCGACGTTGAGGACCAAAAGTTGCACAGAGCCTCCCCTCTGAAGAAACAGTCCACGCAATTGAAGATAATTTGCGAAGACTGCCTTGATTACAATTTCAAGCCGTGCAAGACCAAAGATTCCAACCAATCCCTAAATCACGACGAATATCTTGTCATCCGAAACAACCAGCAGTACATATTCCAACAAACGAGACCTTTACACTTTCCAAAAAACGTTCAGAGTGCTTGTACTAATAGAGGAAAATATACATCGGACAACGTGGAAAATAATATACTGATAAACAACTTTATCAAAATGGAAGACGTAACCGATTGCAAGAGCTTAGATAACGATGATGCTGTGGTTAAAGACGTTAAGGGTAGCTCTAGTGACGTAGAGATAATAGAGAATCCGGAGCCCGATATAGATGATAGCGTAATTGATAACCTAGAAGAGGCAGATGAGCATGTGAAGGAGTTTTTGGGAAAATATCAAGAAGTTCCTGATGATGTCGAACTCAAATGCAGATTCTGCGAGAAGCAATTTCCTGATATTTCGGGAGTGACTGAGCACGGTAGCGAGCACAAACAATATTTAGAAGACGGAGATGTCTTTCCATGCCCCTTGTGTGATTATGGATACGCAAATTTTAAATGGCTAAAAGGACATCTTAAGGCTGCTCATGAAAAGTCCGAAAAGAACAAAGCAAATTCTTCTGGAGATAATAAAAACGAGCCTGAAGAAGCGTCTAGCCCCAAACTTGCGTCACCGAAAATTGAAAAGAACGATTGCGAGAATATATCGGAGATCGGACCGCTTCTGTTGAAGACCGAAGTGAAGCAGGAAACTCTGGACACGAGCGACGAAGAAGCGATATGGATCGTTCAGACAGCTGGCGATGACTCCGACGTCAATGAAGAGAAGGTCAGGGAACTTCTGATGGGAGCCAAGGGCAGTGCTGATCGCGGAAAGCCAATCGTCAGAAGGAGCCATTGTCTCAGTTGCAGTCAAATATTTCCTTCGGCGGAACAGTTGGCACAGCACAAATGCGCCCGAAGGCGCGCCCGGAAACGGAAGTCGGTTTCCAAAGAGGATACCATCATTTGCATACCCACCGAGGAGGATTTTATAAAGAGAGCTAAGAACGGAAGACCGAGATCGACAAATACAAAGGCAGAACATGATAAGACGCGGCGTAAGAAAGGACTCGAGCCATCCTCAGACCCCCAGATCGTCACGTGTCACAACTGCAACGAATCCTTCACGTCCAAAGTGCGCTTGAAATTTCACATGCAATTCCACGACAAAAACGACATGACTACTTCAGACGGCAAATACAGATGCCCGGAGTGCAGTCCCCGCAGCGTTTTCGCAACGGAATCGGAGCTGTTTGATCACGTCCACTTCCAGCACCACAAACAGCGTCGGTGGCAGTGCGTGGTGGACGGCTGTGGGAAGACCTTCTATTTGAGAGCTAATCTGACGAAGCACAGCCGTGTACACACGGACACGCGGCGCTACGTTTGTCCCACTTGTGGAAAACGGTTTCTGGACAAACAGACGTTGGACGAACACTCCGTTACACATTTACAGATCAAGCCGTACCAGTGTCACATTTGTATGAAGCAGCTAACGCGGCGTTCGCGCCTGCGGATGCATTTGAGGGCTCACGAGGAGCagATGACTCCGAAGCACGTGTTGGTGTGTGCGGTCTGCGCACGCGCATTCAAGAACAACATTGAGGCGGAGGAGCACGCTCGAACCTCGACCGCTTGCGTGGAAAGCTTCGCCGAATCCGTGAAGATGGAGAGCGAAGAGTTGCAGCTTTCTCCGAGGACTGGGCTGATCAGGAGACCAAAGGACGCGCCTTCCGACAGACACCACAGCGTCCTCACCCATCCTCACGCGCCCTCGCCCATCCTCACGCGTCCTCTCCCGTCCTCAGCGGCCGCCGCTTGTCGTATAGCCCACCAAGTGGACGACCAACTAGCGATGGACATGCTATCCACTGTGATGGATGAAGCCCGCGCCATCACGCGAGTCGTTGACATCGAGAAGGCCTTCCGATGCGAATACTGCGAAGGTGTGTATTACACGGAAGATGGGCTGAATGGACACCGGAGCATACACAAGGGTGTCAAGAACCCTTTCACCTGCCACATATGCAAAGTTGGCTTCGCTACGTATTCCAGATGCACGACGCACAAAACCACGCATGGTTATTACAAGCGGTCCTTGCAAGATGCCAAGCTGTCGTTAAGAGAGGACGCTATGCCAATACCGCCGTCTGCCGCTGGCATACTGGGATACGGTGACTTCCCCACTGCTAAACACTTCCTCTGCGAGGACTGCGGCCGATCCTACCTGCATTGGACGTATTTGCAAGTCCACCGCCGAATGAAACACGCCAATGATAATTTGATCTACACCTGCAACATTTGCAACGTGTCCTTTCCGAACAGCTGGAGTGTAGCCTACCACAAGAAGAAACTACACGGCGATTTGCAAGATGAGGGGGTCCCTACCAAGGTGGCCAGGGAAAATTACCGTATACCCTGTCGAGACTGCGAGTTGGTGTTGCCAAACAAATCTGCACTTTATAAGCATAGGAAGGAGAAACATAGTGGCTCGTCGCTCGGTCCAGGCGCCGTATGGTGCGCTGTGTGCGCAAAACGCTTTGCGTCGCGAGCGGCATTGGATGCGCACGCGCATGCCGGCTGCGCACAATCCACGCAGTGCGCAAAGTGCATACGCCAGTTTAACAGCGCTGCGGCGCTCACTACGCATATGAAGTGA
Protein Sequence: MVDECPPPLILCMENMAGEEVALRIEPQDDFQTFIDKAKESKISILDGDINSITRNQPVSLTDNIYQYLLNSNHGLNTEMGLASQTLKQILEPNNGTDDLVYILDDGTQINASQIHFDNEDPPVDLTAEKIPFVQYAADFEEVEDNIAEENTRKYNIIDSPVSRWSSRNASPKCSFVNSLPFKLVCNNTSGFEAQFTKYLENEASKTYTTLNPVTARNKSPRSIIRDNYKNYDNYQNSSINSDNIPTFSREDVLNMFKDSPVAASPYENIIEKRKNVRKTDPSRLVFKKHDKKPISYVDVDGTLVSQSESQTCFICTKFVENNAEKLYLFDVEDQKLHRASPLKKQSTQLKIICEDCLDYNFKPCKTKDSNQSLNHDEYLVIRNNQQYIFQQTRPLHFPKNVQSACTNRGKYTSDNVENNILINNFIKMEDVTDCKSLDNDDAVVKDVKGSSSDVEIIENPEPDIDDSVIDNLEEADEHVKEFLGKYQEVPDDVELKCRFCEKQFPDISGVTEHGSEHKQYLEDGDVFPCPLCDYGYANFKWLKGHLKAAHEKSEKNKANSSGDNKNEPEEASSPKLASPKIEKNDCENISEIGPLLLKTEVKQETLDTSDEEAIWIVQTAGDDSDVNEEKVRELLMGAKGSADRGKPIVRRSHCLSCSQIFPSAEQLAQHKCARRRARKRKSVSKEDTIICIPTEEDFIKRAKNGRPRSTNTKAEHDKTRRKKGLEPSSDPQIVTCHNCNESFTSKVRLKFHMQFHDKNDMTTSDGKYRCPECSPRSVFATESELFDHVHFQHHKQRRWQCVVDGCGKTFYLRANLTKHSRVHTDTRRYVCPTCGKRFLDKQTLDEHSVTHLQIKPYQCHICMKQLTRRSRLRMHLRAHEEQMTPKHVLVCAVCARAFKNNIEAEEHARTSTACVESFAESVKMESEELQLSPRTGLIRRPKDAPSDRHHSVLTHPHAPSPILTRPLPSSAAAACRIAHQVDDQLAMDMLSTVMDEARAITRVVDIEKAFRCEYCEGVYYTEDGLNGHRSIHKGVKNPFTCHICKVGFATYSRCTTHKTTHGYYKRSLQDAKLSLREDAMPIPPSAAGILGYGDFPTAKHFLCEDCGRSYLHWTYLQVHRRMKHANDNLIYTCNICNVSFPNSWSVAYHKKKLHGDLQDEGVPTKVARENYRIPCRDCELVLPNKSALYKHRKEKHSGSSLGPGAVWCAVCAKRFASRAALDAHAHAGCAQSTQCAKCIRQFNSAAALTTHMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -