Yplu002531.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- -
- Assembly
- GCA_947310845.1
- Location
- OX371219.1:9108414-9127382[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.32 30 6.2 0.2 2 23 356 378 355 378 0.94 2 35 0.72 67 5.1 2.4 3 23 402 422 400 422 0.95 3 35 0.00078 0.072 14.4 0.0 1 23 426 449 426 449 0.95 4 35 0.28 26 6.4 0.9 2 22 456 476 456 476 0.95 5 35 0.062 5.7 8.4 1.4 1 23 483 506 483 506 0.93 6 35 0.8 74 4.9 5.6 1 23 513 536 513 536 0.97 7 35 5.9e-05 0.0054 17.9 1.0 2 23 542 563 541 563 0.95 8 35 2.2 2e+02 3.5 0.3 2 22 620 640 619 642 0.88 9 35 0.0051 0.48 11.8 1.6 1 23 708 730 708 730 0.95 10 35 0.013 1.2 10.6 0.5 1 23 734 757 734 757 0.95 11 35 0.033 3.1 9.3 0.2 1 19 763 781 763 783 0.96 12 35 1.3 1.2e+02 4.2 0.3 2 22 818 838 817 840 0.89 13 35 0.0021 0.2 13.0 0.1 2 23 866 888 865 888 0.94 14 35 2.3 2.1e+02 3.5 0.3 1 13 909 921 909 931 0.75 15 35 0.005 0.46 11.9 0.4 1 23 935 957 935 957 0.94 16 35 0.039 3.6 9.1 0.2 5 20 965 980 962 982 0.89 17 35 7.1 6.6e+02 1.9 0.3 2 23 990 1012 989 1012 0.88 18 35 0.66 61 5.2 0.4 1 23 1019 1042 1019 1042 0.95 19 35 0.28 26 6.4 0.5 2 23 1047 1068 1046 1068 0.94 20 35 0.00091 0.084 14.2 1.9 1 21 1074 1094 1074 1099 0.94 21 35 0.66 61 5.2 0.4 2 23 1147 1169 1146 1169 0.94 22 35 0.012 1.2 10.6 0.5 2 23 1196 1218 1195 1218 0.93 23 35 0.097 9 7.8 1.7 1 23 1239 1261 1239 1261 0.94 24 35 0.0044 0.4 12.1 0.1 1 23 1265 1287 1265 1287 0.97 25 35 0.0034 0.31 12.4 0.2 3 21 1293 1311 1291 1312 0.92 26 35 0.01 0.97 10.9 0.2 1 23 1349 1372 1349 1372 0.95 27 35 0.00014 0.013 16.8 1.7 2 23 1377 1398 1376 1398 0.97 28 35 0.19 18 6.9 1.0 1 14 1404 1417 1404 1418 0.85 29 35 0.12 11 7.5 0.4 1 23 1549 1571 1549 1571 0.91 30 35 0.019 1.8 10.0 2.0 1 23 1575 1598 1575 1598 0.92 31 35 0.03 2.8 9.4 0.2 2 22 1604 1624 1603 1624 0.95 32 35 0.0021 0.19 13.1 0.6 1 23 1661 1684 1661 1684 0.93 33 35 0.00053 0.049 14.9 4.5 1 23 1688 1710 1688 1710 0.98 34 35 0.00045 0.041 15.2 1.4 1 23 1716 1738 1716 1738 0.98 35 35 5.6 5.2e+02 2.3 2.1 1 23 1789 1812 1789 1812 0.96
Sequence Information
- Coding Sequence
- ATGGATGCAAAAATGTCGACATGGCGGCCGGGCACGGCCGTCTGCCGCTGTTGCCTGGCAGAGGGCTGCTACAAAGACATCTCGACTGAATACTTTTGGATGGGCAAGCGGGAGGTTTACGCCGAAATGCTCACTGAAACATTTGACCTGGCCATCTCCTACTCTCAATCCGGCGGGCCCAACAGCAACAGCCGTCTCATCTGCGAACCGTGTATCTCCCGTCTCCGCGATGCGTCCGAGTTCAAGAGGCAAGTCTACGACTGCGAGAAGATGTTCATGCAGCATTTGGAGCCCACCGGCTCCGGGATTGTGTCCACTGAAGTGGAGATTGAGCCCTTAAACAAGGACGTTAAGGTCGAAGCCGTGAAGGAGGAGAAAGAAGACAGCGGCGACGACTTCTTCGACGACAGAAACGACTTTGGCGACGACGACGACGATGATGACCAAGGCCAGCAGTGCTCTGATGTCACTGCAGGCCTCCTGAAGGGATCCCAGCTTCCCAACGATGGCGGTCCATTGTTTTTCCACGCCTTCACAGTAGATGGTCACGTGGGCGGGTGTTTCCTCTACTTTCAGGCATCCCCGTCAGAGCGGGCTGTCGTGGACGACGAACCCCTAACGAAACTGGCGACGAAAGTACCCAAAAAGGAAAAGAAGGTCGATCTCCTAGACTTTCTCGAGAAACCGGCTGTTGCTAAGCCGGCGGCGGAGAAGAGAAAGGCCCCTGCACCACCTAAACCGAAGGCCACGCCCGTCAAGAAGGTCAAAGTCGTGAAAGAGGCCAAACCGTCTGCCAGTAAAGACAAAGTCGTCGAGAAGAAGAAAAAAGACGTCAATACGAACGACCCAGCGCGGCGGAACTCAGAATTCATACTAAAATACACCACGGCATATCCCTTCCGCGTCAACTACAAGTCCATTCTTTGCGTTCTTTGCTTGGACCTCTTTGACGATCCAAAAACGTTCCGCGATCATATGTCTCAGGAACACCAAACCTTGTCCTTAGCCATGGTCTACTCCAAACTGCCCAAAACTGAATTCATTAAGATAGACTTAAGCGATCTTAAATGCCGAATCTGCACACAAAGTTACGACAACGTAGAAGACGTAGCTACACACTTGAAAGAAACCCATAGCAAAGCGATTAACTTAGACGTCCCTCTAGGCGTGATGCCTTACAAACTCGAAAAAGACTCTTGGAATTGCGTCGTTTGCTCCAAAACTGAGCCCACGTTACACCACCTCAACAAGCACACGATAACGCATTTCCTCAGCTACGTGTGCGAGATCTGCGGCAAGAGTTACGTAGCCAGCACCGGACTCATACAGCACGTCAAAGCTAAACACGAGTTAGACAATCAGGCGACCTGCCGCCGCTGCAAGAAAGCTTTCCCATCGCTAGAAGCCAAAATGAAACACCAGAAGACAGACAAGAATTGTATGCGGCATTGCTGCTCGCTCTGCCCCGAGAGATTCCCCGTCTGGGAACTAAAGCAGCGCCACATGAGTGAGGTGCATGGCGAAACGAGAAAGAAGTATAATTGCCCGGATTGTAACGTGAAATGCAACGATCGGAGGGCCTTCTATGACCACTTTAAGACGTGCCACTCGCAGGAGTGTCTCGTATGCGTGCATTGCGGACTCAAATTCTCTTCGCCGTCCAAGTTAAATCGGCATCTGGGGAAACATGCCACTGGAGCTCGCGCAGGTCTCCACGTGACGTCCCTAGTCACTGGCTTTATTTTGTTTTTAGATGGATTGGCCTCAGACGCAGCCGCGGACACGACCCGTCTCATTCTTAAACACTCGACGGCCTACGTGTTTAACTTACAGATCAAAGGGTCCTCGCACAATATAGAGTGTTGCTATTGCTCCGGAGTATTCGATGACCCCGAGCGGTTCAGATGGCACGTAGACGATTCCCACTCGGACGTGGACAGATCTCTCGTACACCACAGATGGATCACCCCGCGGGTTGATATCACCAATCTGCGTTGTAGGCTCTGCTCCCAACCGATGGAGACGTTAGATAAGCTTGTTGAACACTTCAAATCTGGTCACGGCATGAAGATTCAGTCTAAACCATCCGCGATAGTGCCAATGAAACTAAATAAAGATCTTTATATTTGTCTTATCTGTAGCAAGCGGTTCTCGGAACGTTTTAGCCTCTTTAAACACTCTGGAACACATTTCGGCAGTTACATATGTGACGCGTGCGGTAAAAATTACCAAACCAAGTTCGGCCTTAGAGTTCACACTGAGAAGCAACATGCCAATGCAGGGAAGTTTATTTGTGCGAAATGCAAGGAACTGTTTGATACGAAGGAGGAGCTGAAAAAACACGCTGGAAACCTGATTGCCGGTGATGCCGCTCTGGAGACAGCCTGTTTCATACTAAAGCATTCCACGGCCTACCCCTTTGGGATACAACGGAATCTTCCGAACAAGATTCAATGTTGCTATTGTGATATATTTATCGGTGACCCCGTGCAGTTTCGACGGCATGTCGATGACGAGCATTCAAATGTCGACCGATCGCTCTTGAACGTCAAACGTTCGAAGCAGGCTGCTACGAGGGTCGATATCACAGATCTCAGATGCCGTCTTTGCCCTAAGCCTTTCGAAACGTTAGAGCAGCTAGCTACCCACTTGAAAGACGCTCATGATATGACACTGCAGACAGAGGTTACCGGCCTCGTGCCTATGAAATTAGAGAAGGATCGCTACGTCTGCGTCACTTGCAATAAAAAATTCGCGGGCCTGACGATACTGTACATTCATTCGGGTACACATTTCGCGAGGTATATCTGCCATACATGCGGCAAGAACTTTGAAACTCGCGGTGGGGTCCAGGGTCACGCTGCGAAACATATTAATAAGATAATCTGTATCAAATGTAAGGAAGTATTTGAGACTAAAGACGAGCTGAAGAAGCATAAGCTCGTCAGTAAGCCCTGTCAACCGATGCCCTGCACATTGTGCGTCGAACGATTCACTTGTTGGGAACGCCTGCAGGTTCATCTAGTGGAAGTGCACAATAAGCCCAAGAAAAACTTCCCATGTCTGGAATGCGGTGACGTATTCGAGACTCGGGTCTCACGGTACAAGCACTTCAAATCTGCTCACACTGACGAGCTGAAGTGCATTTACTGTGAGAAGAAGTATGGCATAAAGCGAGACTTGGATGACCATATGAACACTCACACCGGCGAACGGCCCTATAAGTGTAATGAGTGTGATAAATCCTTCAATGCTCTGAAGAGATTGAGGAAACATCAGACCTCGAAGAGGGTACACGCCCACTTGAAGGAAATTGTCCAAGAACCCTCTATTGCGGACCTGTTCATCGCTGGTGCCGCGGCGGAGTCGGCCGGTCTTATTCTAAATAACTCGACGGCATATCCTTTCGCGCTTCGAACCAGGCATCCGAATAAAATACAATGTTGCTACTGCGAGAAACTGATCTCCGACCCGGTACAGTTCAGAGAGCATGTCGACATGGAGCATGCCACGCTCGTGGACCGCTCCGTGCTCAAATACAAACGCGCTCAACAGTCAGCTACGAGGGTCGACATCACAGACCTCCGGTGCCGACTCTGCCCCAAACCCTTCGAAACCTTAGAGCTATTAGCGACCCACTTAATACATTTTCACAAAATCAACCTTGCTACTATAGAATCCGGCCTCGTGCCGATAAGACTAGAGAAGGACCGTTACGTTTGCGTCACGTGTCATAAGAAATTCTCAGGTCTCACCATGCTTTACCTACACTCGGGCACGCACAATGCGAGGTATATCTGCCACACTTGCGGCAGAAACCTTGAGACCGCCGGCGGCCTGCGAGCCCATGCCATACGGCATTTGAACAAGATTATCTGTCTCAAATGCAAAGAGGTGTTCCCCTCGAAAGAGGAACTGAAAAAGCACAAACTTACTAATAAAAAGTGTCTACCATCCGCCTGCAAGATTTGTCTCGAACGTTTCACGTGTAGAGAGCGGATGGAGATCCATCTCGTCGAAGTTCACAATCAGCCGAAAAAGTTTTTCCCTTGTTCAGAATGCGGGGAGGTTTTCGAATCGCGCGTCGCCCGCTACAAGCATTTCAAATCTGCGCACACTGACGATTTGAAGTGCAAGTACTGCGAAAAGCGGTACGGAACGAAGAGGGACCTAAGCGATCACATGAACAGTCACACTGGAGAAAGACCTCACAAGTGTACAATATGCGAAAAGACTTTCAGTGCTAAAAAAAATGAAGAGGACGTCGCCATCGCTTTGGAGCACGCTCGGTTATTGTTGAGATATTCCACATTATATCCGTTTAAATTAAACTGCAAGCAGATGATTAAATGTCTCGTTTGTAGCAGTGGCAAGTCAAAGTGTACTTTCAACAACCCAATAGACTTCAGGAAGCACTTTGCTGAGAATCACGCAAACTTCGACGCAAGCGCAATTTTGCAAAGTGGTGAACTAAGTTCAATATGGCCCCGTGTTGATATTACAGATTTGCGTTGCAAGAAATGCGATGATTCTAAAATGTTTGACTCCATCAAAACAATAGCGGATCATCTCAACCAGCAGCACGATGTAAATGTAGTCTCAGAACTATCACGTCTTGTGCCGATCAGGCTGGAAGTGGACAAATTTATTTGCGTTGTTTGCGATAAAGTCACCTCGACGCTACTTCACTTGTATTCGCATTCTGGTATACATTTCTCTCGATATATTTGCGACCATTGCAACAAGAGCTATGAAACGCGGAAAGCGTTAATATTCCATTTAAATCAACAACACACTGCCACTACGATTCAGTGCAGAAGATGCAGGAAGGTGGTGCCCACAAAAAATGCTCTAAAAGAACACATCAGATCAAGCGAAATTTGCTTTCCGCACGCTTGTACTATATGCAGACAACGCTTCCTCTCGTATCTGCACCGCGAACAGCATCTTGTGGATGTTCATAATAAGCCAAAGAAATTCTTCCCATGCACTGAATGCGATAAAGTTTTCGAAAAGCGTAACGCCCTGTACTTGCATTTCAAAGCGACCCACACGGATGACTTCAAATGCCATTTGTGTCCTAAAAGGTTTGATACCAAACGTGCCTATACGGAACACACGAATAGGCACGCCGGCATTTTGCCATTCAAATGCCCTATGTGCACGAGAGCTTTCCCTACTGAACATCGCTTAAAGTTACATGTGCGCGAACACGACTGGACCCGTAAGAAATCGCAGGAGGCGAACACATCCTGCCCCGCCTGCCCTTACAAAACTCACTATAGATATCGGGTCAAAGCACATGTTGGCCGGTCGCATCCAGAGATATATGAGCAATACTACGGCAAAGACAATAGTAAAATGTACTGTTGTTCAGTCTGTGCTTACACTGCAAGAGTAATGAACCGGTTGAAGTTACACATGAAGCGAATGCATCCCGACGTATTTGAGAAGGAATTTGGAGACGAAGACAGTAAAATGTTCTATTGCTCCGCTTGCGGATACCAAAATCGTCTAAAGGCCAGGCTGAAGACTCACGTAGGAAAGGAGCACCCGGAAATATTTGAGCAGGAATTTCCAGTGGACGAAAGCAAAATTAAACAGTGCACCGTGTGCCCTTATAAAAACACAATGAAATGCAAGCTGAAGCTACACGTGCAACGATGCCACCCCGAGATATATGAGGAAGAATTCGGAAATGCCCGAAGCAGATTCAACTACTGCAACGCTTGTCCTTACAAAATTCGAGGTGAACGAAGCCTTTTAAAGTTACACGTAAAAAAGGCACATCCAGAAATATACGCGAAGGAATTTAAGCCAGACGAGAGCAAAATGAAGACGTGCCCTGCTTGTCCTTTCAAACATCAACAACGATACTATTTAATTAATCACGTCAAGAAGTGGCATCCGGAGATATTTCAGCGAGACTTCGCCGAGACTTCCGTACAGAGGAAAATGCTCAACTGTCCTGAGTGTACTTATCAACACCATCAGAAGTGTCGCATGAAGTTGCATATCAAAAAGCGACACCCGGAAATAGGAGACTGA
- Protein Sequence
- MDAKMSTWRPGTAVCRCCLAEGCYKDISTEYFWMGKREVYAEMLTETFDLAISYSQSGGPNSNSRLICEPCISRLRDASEFKRQVYDCEKMFMQHLEPTGSGIVSTEVEIEPLNKDVKVEAVKEEKEDSGDDFFDDRNDFGDDDDDDDQGQQCSDVTAGLLKGSQLPNDGGPLFFHAFTVDGHVGGCFLYFQASPSERAVVDDEPLTKLATKVPKKEKKVDLLDFLEKPAVAKPAAEKRKAPAPPKPKATPVKKVKVVKEAKPSASKDKVVEKKKKDVNTNDPARRNSEFILKYTTAYPFRVNYKSILCVLCLDLFDDPKTFRDHMSQEHQTLSLAMVYSKLPKTEFIKIDLSDLKCRICTQSYDNVEDVATHLKETHSKAINLDVPLGVMPYKLEKDSWNCVVCSKTEPTLHHLNKHTITHFLSYVCEICGKSYVASTGLIQHVKAKHELDNQATCRRCKKAFPSLEAKMKHQKTDKNCMRHCCSLCPERFPVWELKQRHMSEVHGETRKKYNCPDCNVKCNDRRAFYDHFKTCHSQECLVCVHCGLKFSSPSKLNRHLGKHATGARAGLHVTSLVTGFILFLDGLASDAAADTTRLILKHSTAYVFNLQIKGSSHNIECCYCSGVFDDPERFRWHVDDSHSDVDRSLVHHRWITPRVDITNLRCRLCSQPMETLDKLVEHFKSGHGMKIQSKPSAIVPMKLNKDLYICLICSKRFSERFSLFKHSGTHFGSYICDACGKNYQTKFGLRVHTEKQHANAGKFICAKCKELFDTKEELKKHAGNLIAGDAALETACFILKHSTAYPFGIQRNLPNKIQCCYCDIFIGDPVQFRRHVDDEHSNVDRSLLNVKRSKQAATRVDITDLRCRLCPKPFETLEQLATHLKDAHDMTLQTEVTGLVPMKLEKDRYVCVTCNKKFAGLTILYIHSGTHFARYICHTCGKNFETRGGVQGHAAKHINKIICIKCKEVFETKDELKKHKLVSKPCQPMPCTLCVERFTCWERLQVHLVEVHNKPKKNFPCLECGDVFETRVSRYKHFKSAHTDELKCIYCEKKYGIKRDLDDHMNTHTGERPYKCNECDKSFNALKRLRKHQTSKRVHAHLKEIVQEPSIADLFIAGAAAESAGLILNNSTAYPFALRTRHPNKIQCCYCEKLISDPVQFREHVDMEHATLVDRSVLKYKRAQQSATRVDITDLRCRLCPKPFETLELLATHLIHFHKINLATIESGLVPIRLEKDRYVCVTCHKKFSGLTMLYLHSGTHNARYICHTCGRNLETAGGLRAHAIRHLNKIICLKCKEVFPSKEELKKHKLTNKKCLPSACKICLERFTCRERMEIHLVEVHNQPKKFFPCSECGEVFESRVARYKHFKSAHTDDLKCKYCEKRYGTKRDLSDHMNSHTGERPHKCTICEKTFSAKKNEEDVAIALEHARLLLRYSTLYPFKLNCKQMIKCLVCSSGKSKCTFNNPIDFRKHFAENHANFDASAILQSGELSSIWPRVDITDLRCKKCDDSKMFDSIKTIADHLNQQHDVNVVSELSRLVPIRLEVDKFICVVCDKVTSTLLHLYSHSGIHFSRYICDHCNKSYETRKALIFHLNQQHTATTIQCRRCRKVVPTKNALKEHIRSSEICFPHACTICRQRFLSYLHREQHLVDVHNKPKKFFPCTECDKVFEKRNALYLHFKATHTDDFKCHLCPKRFDTKRAYTEHTNRHAGILPFKCPMCTRAFPTEHRLKLHVREHDWTRKKSQEANTSCPACPYKTHYRYRVKAHVGRSHPEIYEQYYGKDNSKMYCCSVCAYTARVMNRLKLHMKRMHPDVFEKEFGDEDSKMFYCSACGYQNRLKARLKTHVGKEHPEIFEQEFPVDESKIKQCTVCPYKNTMKCKLKLHVQRCHPEIYEEEFGNARSRFNYCNACPYKIRGERSLLKLHVKKAHPEIYAKEFKPDESKMKTCPACPFKHQQRYYLINHVKKWHPEIFQRDFAETSVQRKMLNCPECTYQHHQKCRMKLHIKKRHPEIGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -