Yplu007491.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- Zbtb41
- Assembly
- GCA_947310845.1
- Location
- OX371220.1:1000861-1018479[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.021 1.9 9.9 0.4 1 23 188 210 188 211 0.93 2 13 7.2e-05 0.0067 17.7 0.6 1 23 218 240 218 240 0.98 3 13 0.022 2 9.8 0.6 1 20 279 298 279 300 0.95 4 13 0.0006 0.055 14.8 1.1 1 20 304 323 304 326 0.93 5 13 0.00055 0.051 14.9 3.0 2 22 335 355 334 359 0.92 6 13 0.19 17 6.9 3.4 1 23 367 390 367 390 0.94 7 13 3.8e-05 0.0035 18.5 0.6 1 23 396 419 396 419 0.95 8 13 8.6e-06 0.00079 20.6 1.4 2 23 432 453 431 453 0.97 9 13 0.00092 0.086 14.2 0.0 1 23 459 482 459 482 0.96 10 13 3.9e-05 0.0037 18.5 1.5 1 23 497 520 497 520 0.96 11 13 0.00077 0.071 14.4 0.9 1 23 526 549 526 549 0.95 12 13 1.1e-05 0.00099 20.3 1.8 1 23 557 579 557 579 0.98 13 13 0.001 0.094 14.0 1.8 1 23 586 609 586 609 0.95
Sequence Information
- Coding Sequence
- ATGAACATCGAATCATGTACATTCTGTCTATCGTCAGATAGGAACCTATTCATCATGGAAGACAGGAGTATTCACTTCATTTACTCGTTATTTCATATCGACGATGGCCAGTACATGAAGTATCTCCAAGCAGAAGGGAAGCTGCGAGCATGCTGGCACTGCCAGGCTCTCGTCAAAAACTTCGCAAACTTTGTCATCCTTGCTCGGCAGAGCTTGCAGAAACTAAGGGATTATTTCAACTCTGCTAGTAATGAGGTGCCACATGCATCACAGACCAGTCTCAGCACAACTGAAGTAAAATGCCTGGAGATAGCACCTTTGGAGGGGAAGCGGAGCCATATTGTCGCCAAAGATGAGCCACAGGAGACGGACATCGCGGCAGAAGTGGGGTTGGTCGAAAATATAGTGGTGCCCAAGAAAAGGACAGTCAGAAAGAAAAGTGTTAAACGAGTTAAATCAAAATCCGCCAAAGAACACGTACAACGATGGTCCATCAGATGGGTGTCGTGTGACAGAGCTAGCACTTGGTACGACGAAGAGCGAGCGAGCGAGACGGGAGACTTCGTCTGCGCGCAGTGCAAGCGAAGCTTCGTCAGCGAAGATGCGCGCGCGCAACACGTCCTGGATCATCATGACGAAAACGCGGGCGCTTTCCAGTGCAACGTATGCAAGTACAGACTGCGATCGCGCGCGTCTTTAAGGGCGCACATCGCGCGCCATTTTGCGGTGTGCGCGTGCGCGCTTTGCCCCTTCGAAGGGCGCACGGTGCGCGCCATCCGTGCGCACTATCGGGAGGCGCACGCGAAGGGCTTGAAGCGCGCAAAACCGACCTCGTATACTTGTGGACGCTGTAAGGAGAATTTCGCATCGTGTCCGTCGCTTCGAGAGCACAGGCTTGGCTGTGACACGTACAAATGCGCCAAATGTGACCGCGTGTTCAAGAACAAATTTGCCTACTTCGACCATTTGCCTATCCATAAGGAAAGCGGAAAGGATAAACTGTATTGTCAGGTCTGCGACAAGCATTTCACGAACCCGAAATGGTTCAAGACCCACTTCCGCACCAGTCTGAAGCACGTCTCCCGAGATACCTTCCAACACGAGTGTCCTCACTGCAAGCTCCGCTTTCACATCGCCCAGCGCCTAAAGGAACATATAGCCGTGAAGCATCTCAACAGAGGCCTCTACGCTTGCGATCTGTGCCCGAAAACTTTCTCGATCAATAAGAGTCTAAAGAAGCATCGCGCCCGCGTCCATAACATCGGCTTAGTGGTGACGCCGGCGCGCGACAAAGTCTGCGAGCATTGCGGGAAGGCGTTCACTTCCACGTGGTTCTTAAACGACCACATGCGTCTCCACACGGGCGAGAAGCCGTTCAAGTGCACCCTGTGCCCGGCCGCCTTCCCGCAAAACGGCACCCTGTATATACACACGCTCGTCGTCCACAGGAAGAAACTCGGGAAGGACGGACTCACGGACTCGCCTGCGTACCAATGCGAGGAGTGCGGCAAGGAGTTTCCTTCTAACAGCCGGATGCGCTCCCATCACAAGTTGGTCCATCTCAAACTGAGCCGGTTTAACTGCGAGGTCTGTCACGTGCTGTTCTCATCGTCGGCGAGTCTCAAGAACCATCTGGCGTCGCGGCACGGCGTCCTCTCCAGTGACACCTTCAAATGTGACACTTGCGGGAAGAGATACAATACTAACACGGCGCTCAGAGCCCACTCGAAGCGCCACGAAACGGCGAAGTGTGTCCACAAGTGCCGCGTTTGCGACGCGGAGTTCAAAAGCTCGTCCGGCCTCCAGCTACATTTCAAGTACGTCCATCTCAAGCTGAAGAGAAATGACAAGGTTACCCTTAAGAACGTCGGCGATCCGGAGAAGGAACTGATCATAAACGGGGAGCCGCAGAGATCCGCCATGTTGAAAGCTGCATAG
- Protein Sequence
- MNIESCTFCLSSDRNLFIMEDRSIHFIYSLFHIDDGQYMKYLQAEGKLRACWHCQALVKNFANFVILARQSLQKLRDYFNSASNEVPHASQTSLSTTEVKCLEIAPLEGKRSHIVAKDEPQETDIAAEVGLVENIVVPKKRTVRKKSVKRVKSKSAKEHVQRWSIRWVSCDRASTWYDEERASETGDFVCAQCKRSFVSEDARAQHVLDHHDENAGAFQCNVCKYRLRSRASLRAHIARHFAVCACALCPFEGRTVRAIRAHYREAHAKGLKRAKPTSYTCGRCKENFASCPSLREHRLGCDTYKCAKCDRVFKNKFAYFDHLPIHKESGKDKLYCQVCDKHFTNPKWFKTHFRTSLKHVSRDTFQHECPHCKLRFHIAQRLKEHIAVKHLNRGLYACDLCPKTFSINKSLKKHRARVHNIGLVVTPARDKVCEHCGKAFTSTWFLNDHMRLHTGEKPFKCTLCPAAFPQNGTLYIHTLVVHRKKLGKDGLTDSPAYQCEECGKEFPSNSRMRSHHKLVHLKLSRFNCEVCHVLFSSSASLKNHLASRHGVLSSDTFKCDTCGKRYNTNTALRAHSKRHETAKCVHKCRVCDAEFKSSSGLQLHFKYVHLKLKRNDKVTLKNVGDPEKELIINGEPQRSAMLKAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -