Basic Information

Gene Symbol
-
Assembly
GCA_947310845.1
Location
OX371216.1:8917107-8924426[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.85 1.3e+03 0.4 0.0 30 44 115 129 76 131 0.81
2 7 6.3 9.8e+03 -2.4 0.0 23 45 360 381 356 382 0.86
3 7 0.026 41 5.2 0.3 2 16 431 445 430 479 0.89
4 7 0.0013 2 9.4 0.1 22 46 603 626 585 626 0.88
5 7 0.00014 0.22 12.5 0.1 1 45 675 728 675 729 0.92
6 7 0.00027 0.42 11.6 0.1 14 42 844 876 840 880 0.78
7 7 1.9 2.9e+03 -0.7 0.1 3 13 1026 1036 1024 1053 0.89

Sequence Information

Coding Sequence
ATGGAGCAAGTTGTGGTTAAATCCGAGATGCAGTCAAATGAAGAGATTTTGCTCTTCTATGTGGATGAAAATGGCTACAACGAGGATGGAGTTCTTACAGCAACCGAAAACATGGAACAGTTGATGGAAGACTCCATCCAACAGACGGTCTATATTGAACAAAACCCTGATGAGTCTGATAATGATGATGATGTGATCCAACCAGATGCCAACGAAGAAGTTGTTGAGTGGACCAAGTATGATTCACAACGTCTCCTAACATTCTATGCTGATAATCGAGAAACCTTTATTTCTGGCTCTACGAAGAGGAAATTTCTATGGTCAGTTGCATGCAAGACAATGCTGATGGGTAAAACGCCTTACTCTTGTGAGGTCCATTTAAACGAACTGATGAGAAAGTATGCAGAAGCTGTGATAGATGAGAGGAAAGGTGTCACAGGCAGTTGGCAGACCTGGCCGCTGCTAAGTATGGTGCAACAAGTTTTCCATGATGACAGCACCTTGGAGGGAGTCATAGAGCAGTTGAACTCACAACAAGAGATTATAGTGCCTGATGTGACCGTTGAAAATGAAGTTGAAAATACTGTAAGTGCTAAAAGGGTCAATGCATCACGATCAACTGCTGACCAAAATGTTGTCAATATGCTGACACTGTATCTCAAGCATAAGAATTCATTGAAAAACTTGCAAAAGGACTTCTGGCAGCGAGGGCTTTGGGAGACCATTGCTCTGGAACTGGGTAATGAAGAGGATGCAGAGTACTGGCACAAACGATTCCTAAACTTTAAGCATAACTACATTCGCCTTCTTGAGAAACGCAAGATGGAGGGCACCAGAGCCATCAATTGGCCGTACATGCATTTGTTTGACCAAATATTTGCCAATGATGAGGAGTTCCAACGCAAATATAAGGCACCCACTGTACAGATTTTGTCCAACCAAGTTGTGGAAATTGAAAATAACATCCCTATTAACACAGATAACATTTGGAATATCGCCGAAGTGACTGTGCTAGTCAAGTACTACTATGACTGCTTCGATGAGTTCCAAGACCCGACTATACCAAAGAAGTTTCTTTGGAATGAAGTAGGGCGTTTGCTCGACAAAAGCTTTGAAGTGTGCAAAGCTAAATATGAGACTCTGAAAACAGAACACATTGCTAAATACATCAGTGAAAGCTACGACATTGTCAACCGTATACCCGTGGAGATACTCTATGATAATATAATTTGCAAGGAGACTGAAATAGAAGTGTGTAAGCCAGACCGTTTGAAGAAAAGTGGCCAAACAGGACCATGGACTACGGAAGAGCTTGACGAATTGGTTCAGTTCATTTGTAACTCTGTAGATATGTTTAAAGATCCTATATGCCACTTTGTATGCTGGGCCGTCGTAGCATACAAAATGAATAGAAATGTCCTAGATTGCCTGCAACAGTTGGAGGAACTAGTAACTCTGTATAAGACTATTTTGGCTGATAAAAAAGAGAATCCTGACATGCAAATTGATTGGAGGTACATTGACTTGTTCGACAGAATCTATGATTATGGAATGGATGTGAATTTGCTGGCTGGTTACCACAATTTGAAGTTGAAAGAGGCGAATTTGGATAACAATACAAAATCAGCTAAACCGTCCACCGATGGTGGCCAGTCGAATCAAAACAACGAGTTCGACGAACAAGACCCCGACGACGAAGATTTCGACGAGAGCGGTTTCAAAAAATCTTCACGTAATTCATTCAAGATCCTGGAATTTTACCAAAAGAACAAGCTAAAATTCACAACATCCAAGAAGCACTCATCGCTGTGGTCAATACTCGCCGAAGAATTATCCCTAACGGCAACTCAGTGTGCTCACCGCTTCAGAAACCTCAAACAAGTGTATGTACACTATGTCCAAAGGGAAATCAACAAACCGGACAAGCCGATAATGTGGCCGTATTACCAACTGTGCAAGAAGGTGTTTGGCTACAGAGAATTGAAAAATAAGTTGAAAAACAGCAACTTTGACCCCAACGATAAAGAAGACTGGTCTTCCGCTGACATAAATCAGCTCATAGCGTACTTTGCCAAGCATTACAACGAAATCACAGAGAATTCCCACGAGCTGAGCCTCTGGACGGAGTTGTCAAGGGAGATTGGAAGATCACCGACCGCCTGTCGTTACAAGTTCCTCGAATTAAGGAAGTCGTACAGGAAACTGAAGACAATGAAGACAAGGAATCCGTCAGTGAAAGTGAACTGGAAGTACTTTACAACTTTTGATGAGTTGTACCAGTATGCATCGGGTGGTAGTTTGGAAAACGACGAAGCTATGGAGGTTGACGAGGATGTTAGTAATGGCCTGCAAGAAGATGATGACATCCAGTGCATCTTCGTAATCCCAGAGGGTCAAGACGTGAACGACTTGAACAACTTACAAGCAGTGAATGAACAGACGGAAGTAACCTCTGAACCCGCCAAAGTCCCTGTCAAATGGAACAAAAAAAGCAAGAAACGTCTTCTGTTCCTCTACTTGAACTACATCAAGGCACACAAACTCACGGAGATCAGTCGCAACGAGATGTGGAAGGAAATAGCGTCGAAGCTCCAGAATAAATCCACTCTGTCGTGTAGAAAAATGTTCGCAAAACTCAAAAAGATGAGACTCGCAGCGAATGACGACGAAGTGAAAAAGCAGACGCCATACTACGCTCTGCTCGAGAAAATCTTGGCTCTTAAACCGAAGTTTAAGAAAAACGCTCCGAAGGACGACGACGCCTTGATAGAAGAAACAGCCTGTAAAGATGTGCCAATGTCTACTGAAAATGTGCAGAAAGCTCTAGAGTTCTATTTGAAAAATGTCGAGGAGTTCGTCAGTCCGCGTTTCGAGAAGAAATACGCTTGGAATAACCTCTCCAAAGCCATCGGAGAACCACTAAGCAAGGTCTTCAACAAGATAAACTATTTGAAGAACAACATCGAAGAGAATTCTCCCTTCATTGATATTCTAAGACAAATACAAGCGAAAGAAAACGCTATTAAAGTCCACGCGGGAAATGACGAAAGTAAGGTCTCGGACGAGACTGAAACGGCTTGGTCTGACAGCGAGACTGAGCAACTACTCATCTGGTACCTAGCTAACTTAGAAAAGTTTAAAAATCCCAAGTTTGTCCGCAAGTATCTGTGGATTGAGTCGGCCAATATACTATCCAAGACACCCCTGGCTTGCTCCAAGAAAATGTCCGAAATAAGAACGGAGTACAGGAATATGGTTCGCGAGAAACCTGACGAACTGAATGGGTGGAAGTTCTACGATTTGTGCCAGAAAATTTATGGCACTGGTAAACAAAAAGCTTCGGAAGCAGGGCAAGAGTAA
Protein Sequence
MEQVVVKSEMQSNEEILLFYVDENGYNEDGVLTATENMEQLMEDSIQQTVYIEQNPDESDNDDDVIQPDANEEVVEWTKYDSQRLLTFYADNRETFISGSTKRKFLWSVACKTMLMGKTPYSCEVHLNELMRKYAEAVIDERKGVTGSWQTWPLLSMVQQVFHDDSTLEGVIEQLNSQQEIIVPDVTVENEVENTVSAKRVNASRSTADQNVVNMLTLYLKHKNSLKNLQKDFWQRGLWETIALELGNEEDAEYWHKRFLNFKHNYIRLLEKRKMEGTRAINWPYMHLFDQIFANDEEFQRKYKAPTVQILSNQVVEIENNIPINTDNIWNIAEVTVLVKYYYDCFDEFQDPTIPKKFLWNEVGRLLDKSFEVCKAKYETLKTEHIAKYISESYDIVNRIPVEILYDNIICKETEIEVCKPDRLKKSGQTGPWTTEELDELVQFICNSVDMFKDPICHFVCWAVVAYKMNRNVLDCLQQLEELVTLYKTILADKKENPDMQIDWRYIDLFDRIYDYGMDVNLLAGYHNLKLKEANLDNNTKSAKPSTDGGQSNQNNEFDEQDPDDEDFDESGFKKSSRNSFKILEFYQKNKLKFTTSKKHSSLWSILAEELSLTATQCAHRFRNLKQVYVHYVQREINKPDKPIMWPYYQLCKKVFGYRELKNKLKNSNFDPNDKEDWSSADINQLIAYFAKHYNEITENSHELSLWTELSREIGRSPTACRYKFLELRKSYRKLKTMKTRNPSVKVNWKYFTTFDELYQYASGGSLENDEAMEVDEDVSNGLQEDDDIQCIFVIPEGQDVNDLNNLQAVNEQTEVTSEPAKVPVKWNKKSKKRLLFLYLNYIKAHKLTEISRNEMWKEIASKLQNKSTLSCRKMFAKLKKMRLAANDDEVKKQTPYYALLEKILALKPKFKKNAPKDDDALIEETACKDVPMSTENVQKALEFYLKNVEEFVSPRFEKKYAWNNLSKAIGEPLSKVFNKINYLKNNIEENSPFIDILRQIQAKENAIKVHAGNDESKVSDETETAWSDSETEQLLIWYLANLEKFKNPKFVRKYLWIESANILSKTPLACSKKMSEIRTEYRNMVREKPDELNGWKFYDLCQKIYGTGKQKASEAGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-