Yplu020019.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- -
- Assembly
- GCA_947310845.1
- Location
- OX371191.1:2841093-2843554[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-10 8e-07 29.5 0.1 2 39 16 53 15 56 0.92
Sequence Information
- Coding Sequence
- ATGGTCAGAAACTACAAAAAAAAGACTAAAAGAGGAGAATGGTCCCAAGAGTCCATGAAAGCAGCTATAGATGAAGTATTGAGCAAAAATTCAGGATATAGAAAGGCAGCCTTAGAACATAATATTCCTCAAACTACTTTGGAGCGTTATGTCAAGAAAATTAAACGAGGTGAAGAAATTACCGTCGGATTACCATTGGGGCCTATGAAGTCTGTTTTTTCGCAAAACGAAGAAAAAGAACTTGCAGAATATGTAAAACATATGGAGGAACGACTTTTTGGCTTAACTACATTGGATTTACGGCGTCTGGCATACCAGTTGGCTGTTAAAAATAATAAAAAGCACAACTTCAATAATGAGAAAGAGATGGCAGGTGTCGACTGGCTAAATGGGTTTTTAAAACGTAATCCGGATTTATCAATTCGTAAACCAGAGGCTACTTCGGCAGCGCGCGCTATGGGATTCAACCGAGTAGCAGTTGGGAATTTCTACCAGCTTCTCGGGGAAACATATGACGCATTTCATTTTACTCCAGATAAAATCTATAACTGCGACGAGACTGCTATATCTGTTGTTTCGAAAACGAAGAGCAAGATAATAGCCTTAAAAGGAAGAAAACAAGTCGGTTTATTATCTTCTGCAGAGCGAGGCCAAACCGTCACTGTAGAAATTTGTTTCAATGCTGCTGGAACGTACATGCCTCCATTCATTATTTTCCCAAGACAGCGTATGAAACCTGAATTGCTAGACAATGCTCCCCCAGGAACAACATCAGTATGTAATCCAAAAGGCTGGATAACAGTTGAACTGTTCACCCTTTGGTTCAAAAAGTTCATCCAATTTACAGGAGCTTCCCCTAGCAATAAAGTGTTGCTGCTTTTAGACGGACATcggtgggctcatactgcatgtgctggggtggatgatgaagacttaaatgaagtactgatatgcttgttctgtgaagaagaataa
- Protein Sequence
- MVRNYKKKTKRGEWSQESMKAAIDEVLSKNSGYRKAALEHNIPQTTLERYVKKIKRGEEITVGLPLGPMKSVFSQNEEKELAEYVKHMEERLFGLTTLDLRRLAYQLAVKNNKKHNFNNEKEMAGVDWLNGFLKRNPDLSIRKPEATSAARAMGFNRVAVGNFYQLLGETYDAFHFTPDKIYNCDETAISVVSKTKSKIIALKGRKQVGLLSSAERGQTVTVEICFNAAGTYMPPFIIFPRQRMKPELLDNAPPGTTSVCNPKGWITVELFTLWFKKFIQFTGASPSNKVLLLLDGHRWAHTACAGVDDEDLNEVLICLFCEEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01544810; iTF_01542891; iTF_00636290; iTF_00825606;
- 90% Identity
- iTF_00825606;
- 80% Identity
- -