Yplu026273.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- -
- Assembly
- GCA_947310845.1
- Location
- OX371197.1:3563544-3565343[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-12 5.1e-09 36.5 0.0 1 37 13 49 13 56 0.95 2 2 6.1 8.7e+03 -2.6 0.0 14 22 128 136 127 136 0.86
Sequence Information
- Coding Sequence
- atggggaaggttactccaactgacacaagaaaatggacagaagaaaacttgaagaaggcagtagatgcggtgaaaactaaaaacatgggagtgaatgaggctagtcgtatctacgagataccgtcaagaactttacgacgacacatccttaaaggctggcagtgcaagcagactataggtagaccatcagaCCTGGGCTGGCAAAATGAATTGAGGCTTGTTACACATATAAAAAAACTAGAAGCCATTGGATTTCCATTGGACCAGTCTAGACTTCAGTCGATTGCGTATGACTTTGCTGAAAAACTGAAATTACCACATCGATTTAATCACGAGAAAAAGCAAGCAGGTTGGGACTGGTTTCAAGGATTTATGAAGCGTCATGGAAATATTAGTATGAGGAAAGCGGAAGGCTTATCACTTGCCAGAGCCAACGGTATGAATCGACAAGACGTTAGCAACTATTTTGATACGTTGCTGAAAGAGATGACAGAAAAGCTTAGCAAACCAGAAAGGATTTACAACATGGACGAGACTGGCATACAGGTTAACAATAAAACTGGAAAAGTGCTAGCTAGCAAGGGTGCGAAATGTGTAAATACTGTAACAAGCACTGAGAAAGGAGAAAACATATCTGTCATTGCTTGTTGTAATGCAGAGGGTACATTCCTTCCGCCCGTTTTGATCTTGAAAGGGAAGTACAAAAAGCCAGATTTTTCCGAGGGTTTACCTCCTGGCTCAGACGTTTATATGAACCAAAAGTCTTCCTACATAAACGCCGAACTATTTTATAACTGGCTGAAAGACCACTTTATTCCACGAAAGCCTGATGGAAAAGTGCTTTTGATTTTAGACGGTCATTCCTCTCATTCCAACTCTTATGAAATGTTACGATTGGCTGCAGAAAATGACGTGATCATTCTGTGCCTTCCCAGTCACACCACTCAGGCACTACAACCACTGGATCGAGCTTTTTTTAAACCTTTCAAAAGTTACTTGGCCAAAGAAATCACAACTTGGTTTATCAACAACAAAGGTAAAGCTTTTAGCCGATATCACGTCTCGCAAATGATCGGTGCTGCTTGGTACAAGTCTGCCATTCCAGCCATTGGCGTTTCAGCATTCAAAGCGACCGGAATATGTCCGTTTGATCCGAATGCTATCCCTGATTATTTTTTTAGAATCTCTGATGCATCGGTAAAAAACACACAGACGAATGCTCAGGACACAGACAATAACATTTACTTACCAAGTACATCGGCATCTAATGCAGTGCAACAAAGTGATGATACCAGGCCATCTACGTCTCAAACTGTTGTGAGCAATCAGAATGATGCGTCACAAAATGCAACACCAACCAAGACGTTAGAGAACGTTAGTCCATTGCCCATAATTCATCAAAAAGTTAGCAAAAGGAAACAAAACGTTAAAGTTTTGACATCAGAAAGTCACTTGACAATTCGTAAACTTTTCGAAGAAAAAAAGAAGTCACAACTGCAAAAGAAAGATTTGCCGCCGCTGAAACGTACGCAAAATAAGAAAAAAGATCTGTCTTCTTCATCAGAAAGCGAAGAAGAGATACACCTTCCATCGAGCAGTGAAGAATGTTCTGACGAAATGGAGAATATTTGCGTTGAGTGTCTGGAGTCATATTATCAAACAAAATCAAAAAGTGACTGGATTCAGTGTGTACAATGCTCTAAATGGTTACACGAGGACTGCACAACTTATGCGCTCAAATGCAAAACCTGCGGAGCAAAGAATAAAGGCAAAGGAAAGGGAAAACGGTCTGCAAAGTGA
- Protein Sequence
- MGKVTPTDTRKWTEENLKKAVDAVKTKNMGVNEASRIYEIPSRTLRRHILKGWQCKQTIGRPSDLGWQNELRLVTHIKKLEAIGFPLDQSRLQSIAYDFAEKLKLPHRFNHEKKQAGWDWFQGFMKRHGNISMRKAEGLSLARANGMNRQDVSNYFDTLLKEMTEKLSKPERIYNMDETGIQVNNKTGKVLASKGAKCVNTVTSTEKGENISVIACCNAEGTFLPPVLILKGKYKKPDFSEGLPPGSDVYMNQKSSYINAELFYNWLKDHFIPRKPDGKVLLILDGHSSHSNSYEMLRLAAENDVIILCLPSHTTQALQPLDRAFFKPFKSYLAKEITTWFINNKGKAFSRYHVSQMIGAAWYKSAIPAIGVSAFKATGICPFDPNAIPDYFFRISDASVKNTQTNAQDTDNNIYLPSTSASNAVQQSDDTRPSTSQTVVSNQNDASQNATPTKTLENVSPLPIIHQKVSKRKQNVKVLTSESHLTIRKLFEEKKKSQLQKKDLPPLKRTQNKKKDLSSSSESEEEIHLPSSSEECSDEMENICVECLESYYQTKSKSDWIQCVQCSKWLHEDCTTYALKCKTCGAKNKGKGKGKRSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545683;
- 90% Identity
- iTF_01545683;
- 80% Identity
- -