Yplu022344.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- -
- Assembly
- GCA_947310845.1
- Location
- OX371201.1:22068904-22083447[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-09 1.4e-06 28.7 0.0 4 39 228 264 225 268 0.87 2 4 4.9e-12 6.9e-09 36.1 0.5 4 39 282 317 280 320 0.93 3 4 1.1e-15 1.6e-12 47.8 0.0 2 45 335 379 334 379 0.97 4 4 2.2e-17 3.2e-14 53.2 0.0 2 43 387 429 386 431 0.93
Sequence Information
- Coding Sequence
- ATGCCCGGTTACGGCTTGCCTCATGTGAAGTGCGAACCACCGTCTGAATCGGATGACGATGACAGCAATTCACAATTCCCGCAAAAGTTTCTCATACATCAGGAAGCGCCATGCTTGGAGGAGCTGGGCGGGCCAGCGCCCGCCGCGCCGGCCGCCACGCCCGTCTGCGTCAAACAGGAGCCCCTGGACGTGGCCGCCACCTCACTCGAGACACTCGAGCCCGCGCCGCATACGAGCTCGGCGCTGCAGCTGGCGCTCATTAGTTCGAGTGAGCTCCATTCGGAGTTTATGCCGCTACTGGCCGTCAAAGACGAGCCCAACTCTGAAGGGCGACGGCCGTGTGTCGGACTCTCCTCTCCTAATAATAGGAGAGGCATACCTCCTAAAACACCCCGGGGGCCGTCCTGTCGCTCGTGCAATGGGGCGCCGCCGGATCTCGCAAGTGGTAGACCACAGTGCGAATGCTACAGCGGCGCCCCGGCGACGTCGACCCGACTCGCAAAGGAGCCGGGCCCACCCTCACTGGAGAAGGGGCATGGGCCCCCCACCCCCTTCTCCCGTCACGATGTCGGACGGCAGGTCCCCCAACCTGCCGTCTACCATCACCAGCTGAGCGGGTCTGACACAAGCGACTCGTGTGGCGGCGATGCAGCGCGCAGTCCCAAAAGCTGGACCCAGAAAGACATGGAGAGCGCACTCGACGCTTTGAAAACTCAAAACATGAGCCTGACTAAGGCGTCGGCGCGGTACGGCATCCCGTCGACGACACTGTGGCAGCGCGCGCACCGGCTCGGCATCGGCACGCCCAAGCGCGAGGGCGGCGCCAAGTCGTGGGCCGCCGCCGACCTGCGCGCCGCCTTGCACGCCTTGCGCCAAGGCGCCATCTCCGCCAACAAGGCCAGCAAGGCTTACGGCATCCCCAGCAGTACCCTGTACAAGATAGCGCGGCGCGAGGGCATCCGACTCGCCGCGCCTTTTAACGCCGCGCCCACCAGCTGGCGGCACGAGGACCTGGATCGAGCATTGCACGCCATACGGACCGGACACGCCTCCGTGCAGCGGGCTTCGGCGCAGTTTGGGATACCCACGGGCACGCTGTACGGAAGGTGCAAACGCGAGGGCATCGAACTGTCTCGCTCCAATCCCACCCCGTGGTCTGAAAATGCAATGGGAGAGGCACTGGAGGCTGTCCGAGTTGGTCAGATGTCGATAAACCAGGCTGCTATCCACTACAATCTGCCATATTCTTCTCTGTATGGTCGATTCAAGCGCTGCAAATATCCACAGAGCCCCCAGCACCCGCACCAACCGCCGGCGGAGCACCCCGCGCCGGGGCCCCACTTCGCAGCCTACCAGAACTACCCCCCCTGCCCGGAGCCCCCCGCGCCCCAGCCGGGGCCCCCGCCGATGCCCCACGAGGGGCCGGCGGGGCCCCACGCGGGGCACCAGCTGGTGAGTGACCAGTTCGCCATGTACTACGGACAGGGCATCGCCACCAGTTGA
- Protein Sequence
- MPGYGLPHVKCEPPSESDDDDSNSQFPQKFLIHQEAPCLEELGGPAPAAPAATPVCVKQEPLDVAATSLETLEPAPHTSSALQLALISSSELHSEFMPLLAVKDEPNSEGRRPCVGLSSPNNRRGIPPKTPRGPSCRSCNGAPPDLASGRPQCECYSGAPATSTRLAKEPGPPSLEKGHGPPTPFSRHDVGRQVPQPAVYHHQLSGSDTSDSCGGDAARSPKSWTQKDMESALDALKTQNMSLTKASARYGIPSTTLWQRAHRLGIGTPKREGGAKSWAAADLRAALHALRQGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRHEDLDRALHAIRTGHASVQRASAQFGIPTGTLYGRCKREGIELSRSNPTPWSENAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYPQSPQHPHQPPAEHPAPGPHFAAYQNYPPCPEPPAPQPGPPPMPHEGPAGPHAGHQLVSDQFAMYYGQGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -