Yplu029251.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- Ebf4
- Assembly
- GCA_947310845.1
- Location
- OX371205.1:8502832-8529127[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-19 1.7e-15 57.3 3.8 180 213 29 62 17 62 0.92 2 3 4.3e-28 7e-24 84.9 0.5 294 335 59 100 58 109 0.95 3 3 0.035 5.8e+02 -0.7 0.0 544 572 167 194 153 200 0.77
Sequence Information
- Coding Sequence
- ATGGAGACGGCGGGAAGCTGCGTCGCCTGCGATACCTACCCTCCGCTTTCCGAGGATCCGCACAAAAACTATACTGTCCCGGGTATATATAGATTTTTCCTGAAATTCTTCCTAAAATGCAATCAGAATTGTTTGAAAAACGCTGGCAATCCTCGAGACATGAGGAGGTTTCAGCTCATAACCTCGCACGCAATAAGGGTACAAACACCTCCGAGACACATACCGGGCGTGGTGGAAGTCACGTTGTCCTACAAGAGCAAACAGTTTTGCAAGGGGGCCCCTGGGAGATTCGTTTACGTTTTGTCTCTAGGCCCGTACCACCCGACCAACGTGAATGGACACTTATCATCTGACCATCAACACTATAACGCGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAAACGAGAGCTTTAAAAGCGAGGGCGACTGTCCGGCAAACATTCATCCAAAATGCAATAGAAATGGTATGAAAGGGCCGGAGGGTAAAGAGACTAAGCTAAGGAGCGCCTTCGCAGTTGTCAGACACAGCCAGTCGCCGCCGCGCGTTGCCAATTTCCAACATCACCAGAACTGGCAGCATCTTGCCGTGCAGTGTTAG
- Protein Sequence
- METAGSCVACDTYPPLSEDPHKNYTVPGIYRFFLKFFLKCNQNCLKNAGNPRDMRRFQLITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVLSLGPYHPTNVNGHLSSDHQHYNAYNTKDSGHYSERNESFKSEGDCPANIHPKCNRNGMKGPEGKETKLRSAFAVVRHSQSPPRVANFQHHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00278901;
- 90% Identity
- -
- 80% Identity
- -