Ypad021751.1
Basic Information
- Insect
- Yponomeuta padella
- Gene Symbol
- nfxl1
- Assembly
- GCA_947311075.1
- Location
- OX371251.1:12862946-12865417[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.065 8.1e+02 0.7 0.4 4 10 169 175 168 175 0.96 3 19 3.1e-07 0.0039 17.6 15.5 3 19 186 202 185 202 0.95 4 19 4.7e-08 0.00059 20.3 13.6 3 19 239 255 237 255 0.92 5 19 2 2.5e+04 -4.2 1.7 6 10 280 284 279 284 0.85 6 19 3.2e-09 4e-05 24.0 11.8 1 19 290 308 290 308 0.98 7 19 0.45 5.7e+03 -2.0 0.4 5 10 332 337 332 340 0.91 8 19 1.5e-06 0.018 15.5 19.5 3 18 345 360 337 361 0.84 9 19 1.1 1.3e+04 -3.2 1.2 5 10 384 389 384 389 0.91 10 19 6.7e-06 0.084 13.4 19.0 1 18 395 412 395 413 0.97 11 19 7.9e-10 1e-05 25.9 14.4 1 19 422 440 422 440 0.99 12 19 0.00033 4.2 8.0 6.2 10 19 489 498 486 498 0.93 13 19 0.00051 6.4 7.4 7.5 1 12 507 517 507 517 0.96 14 19 0.31 3.9e+03 -1.5 3.5 14 18 546 550 546 551 0.87 15 19 1.9e-05 0.24 11.9 3.4 1 11 587 597 587 598 0.97 16 19 2 2.5e+04 -4.9 3.3 15 18 612 615 611 619 0.72 17 19 0.0018 22 5.7 14.1 4 18 629 644 627 645 0.82 18 19 0.48 6e+03 -2.1 1.1 8 13 650 655 649 656 0.78 19 19 9.5e-08 0.0012 19.3 12.6 1 18 686 704 686 705 0.91
Sequence Information
- Coding Sequence
- ATGTCGCGCAAATACGAGGATGCAGCCGCGAAACTGCAGCAAAACGTGCAGAGACACCTGAAGGAGTTGAAAGAGGTTTTATCCTCGGATGACGAAGACCCCTACGAGTCTAGCGTTTTGGATGGAGTCCTACAAAGCTACAGGCACGGTGGCGGGGATATGCAAATGTTGCAGCGCACTAAGAACCTTCTAGAAGAGTCTCTAAGCGGTAGACCAATCATATGTCTCATTTGCATCGGCTCCATCAAGAGGCTCGACGCCATATGGTCTTGCTCACACTGCTATTCATACTTCCACCTCTCTTGCATTCAAAAGTGGTCCAACGACAGCATAAGTCTGAGGAGCGAAGAGACTCACGGGCCAATATCAGTGGTTGTGCCCAAAAAAGTTGAATGGTGCTGTCCTAAGTGCCGTCAATCGTATTGTAAAGAGGAAATACCGCGCAAATACGAATGTTACTGCGGCAAAGTGCAAGATCCACCTTTCCATCCATGGTTGCTGCCACACTCATGTGGAGAGGTCTGTGAAAAGAGGTTGTCTACTGGCAATAATTGCAAACACCGTTGTTTACTGCTCTGCCACCCTGGACCCTGTCCACCATGTCCACAGATGGTAAATGGTGTTTGTTTCTGTGAAAAAGAAAGAAAAAAGGTCCGATGCAGCCACTCTAAGTGGTCTTGCGGACAACAGTGTAAAAAACTTTTGTCCTGCAAGTCACATAAGTGTGAAAACCTATGCCACAACGGAGAATGCCCACCCTGCAGCTACACAAGCATTCAGTCTTGCCAATGTAAAGCCGAGAAGGTCAAAAGACCATGCAACGATCCTCTCTGGCAATGCCAAAAAGCATGCAATAAGCCGTTTTCATGTGGCTACCACAAATGTGAGAAAGTTTGCCATGTAGGAGAATGTGGTCTTTGTCCTAATTCAGGAATGCGATCTTGCCCATGCGGTATGAGCCAGCGCTATGTTGAGTGTCCAGACACAATGGAGACATGTATGGAAACTTGTGGTAGACAGCACGAACTATGTAAGCATAACTGTCCAGAAAAATGCCACAAAGGCCCTTGTCCACCTTGCCTGGTTTTAGTTGAAAAAAAGTGTCAGTGCTCTATGCATACCAAATCCCTGCCCTGCAGCCGTGAGTTCCGGTGCGAGGCCAAGTGCCGCGGCATCAGATCATGCGGCAAGCATGGATGCAGTAGGAAATGTTGCAATGGTAACTGCCCACCATGTGAGAAACTTTGCGACAAACCTTTACAGTGTGGCAGACATAAGTGCACAACTGTCTGCCACCGCGGCCCTTGCTACCCTTGCCCAAGAGAGGCTCGTGTCACCTGCCGTTGCAAAGAGACCTCTGTGACAGTTCCGTGTGGCAGAGAAAGGCATACAAAACCACCGAGGTGCCACCTACCTTGCAAGATTAAATACAAATGCGGTCATGCAGACGAAAATGTACACCAATGCCATTTCGGCAACTGTCCGCCTTGCAAGGCTATTTGCGACAAGACGCACGTCTGTGGCCACCGTTGCCCCGCCACGTGCCACGAGAACGTCGCCGTGACGTTCAAACAGGTAGAGAAACCTGCTACGCCTTGGGAGGTCCAGCCCCCAAAAACTAAGATCATGTCGCTAGACTGCCCGCCGTGCGAAACTCCCATCCCTGTCACTTGTTTCGGAGAACATGAGACCGTCAACCAGGCTTGCTACGTCGCTGCGCGTTTTGCTTGCGGCAGAGAGTGTGGCCGTCCGCTGCCTTGCGGCAACCACGTCTGCGCCGCGCTATGCCATCTCTTTGAGCCCCTTACTGAGTTGCCTAGCATCTCAAGCTCCTGCGCACCCTGCGAGGAGGAATGCCTCGTGCCACGGCCGGCGAAATGCGTTCATAAGTGTCCAAAGAAGGCCTGTCATCCAGGCGAATGTCCCCGCTGCGACATTATCAAAAAAAGTCCTTGCCATTGCGGCCTTAACGAACTCTACCTGCGCTGTTACGAACTCACTTCAGCGACTGACGAAATGCTTTCCTGCAAACTCCAGTGCCCGAAGAATATGCTGTGCGGTCACCGTTGCAAGGAAGTCTGCCATCCGGGTAGCTGCCCAATTCAAGTTTGCACAAAGAAAGCCAAGGCGTACTGCCCCTGCGGGAATATAAAGAAAGAAATACAATGCAGCCTCATTAGAGAGGGCAAAAAGATTGCTTGTGATGAAACATGCGATGCTAAGAAGCTAGCCGCTCAATTAGAAAAAGAAAAAGAGGAGAAAAAACGCAAGGAGCACGAAGAAGAAAAAAACAAAAGAGAGTTAGCGGAATATGAGTGGAAGATGAGTGGAAAGAAACGCAAACACAGGGAAAGGAGGGTTGTTGAGAATAAAGATGAAAGGGGTTTCTTGAAAAAGTTCTGGATTCCTATCACTGCTCTGTTAACAGTTGTTCTGGGTGGTATTTATTATGTTCTTATGGTGGAGTATTAA
- Protein Sequence
- MSRKYEDAAAKLQQNVQRHLKELKEVLSSDDEDPYESSVLDGVLQSYRHGGGDMQMLQRTKNLLEESLSGRPIICLICIGSIKRLDAIWSCSHCYSYFHLSCIQKWSNDSISLRSEETHGPISVVVPKKVEWCCPKCRQSYCKEEIPRKYECYCGKVQDPPFHPWLLPHSCGEVCEKRLSTGNNCKHRCLLLCHPGPCPPCPQMVNGVCFCEKERKKVRCSHSKWSCGQQCKKLLSCKSHKCENLCHNGECPPCSYTSIQSCQCKAEKVKRPCNDPLWQCQKACNKPFSCGYHKCEKVCHVGECGLCPNSGMRSCPCGMSQRYVECPDTMETCMETCGRQHELCKHNCPEKCHKGPCPPCLVLVEKKCQCSMHTKSLPCSREFRCEAKCRGIRSCGKHGCSRKCCNGNCPPCEKLCDKPLQCGRHKCTTVCHRGPCYPCPREARVTCRCKETSVTVPCGRERHTKPPRCHLPCKIKYKCGHADENVHQCHFGNCPPCKAICDKTHVCGHRCPATCHENVAVTFKQVEKPATPWEVQPPKTKIMSLDCPPCETPIPVTCFGEHETVNQACYVAARFACGRECGRPLPCGNHVCAALCHLFEPLTELPSISSSCAPCEEECLVPRPAKCVHKCPKKACHPGECPRCDIIKKSPCHCGLNELYLRCYELTSATDEMLSCKLQCPKNMLCGHRCKEVCHPGSCPIQVCTKKAKAYCPCGNIKKEIQCSLIREGKKIACDETCDAKKLAAQLEKEKEEKKRKEHEEEKNKRELAEYEWKMSGKKRKHRERRVVENKDERGFLKKFWIPITALLTVVLGGIYYVLMVEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01561703;
- 90% Identity
- iTF_01543530; iTF_01546296; iTF_01547198;
- 80% Identity
- iTF_01543530; iTF_01547198;