Ypad020402.1
Basic Information
- Insect
- Yponomeuta padella
- Gene Symbol
- grn
- Assembly
- GCA_947311075.1
- Location
- OX371233.1:6618735-6626731[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6 4.1e+03 -2.0 0.0 13 25 3 15 1 15 0.70 2 2 1.6e-19 4e-16 58.8 7.4 1 35 87 120 87 121 0.97
Sequence Information
- Coding Sequence
- ATGCTACGGCGCATGCAGTTCACCGAGCGTCGGGTTTGTAAAGCGAATTTCCCAACATGGCTTCCGCGGTTCAAGCGGCCAATGGCAGGAGGGCGCGGGCGGCGCGGCGGGCGCGCGCGGGCGGGGGGCGATGCATCTTCGAACGAAAATTTGAAAAATTTACGAGCTCTTTCAGCCAGTGTTCTTTATTTTATCGACATCGTTATGAGGCGCCTCGAGAGGTCGTTACAGAGTGCGGCGCGACGTGCGGGCACGTCGTGCGCCAACTGCAAGACAACCACCACGACGCTCTGGCGGCGCAACCAGAATGGTGAACCAGTCTGCAACGCTTGCGGACTCTACTATAAGCTGCATAATAGCCCCGCTCTTACAAAGAGCTCCAGAGCCTTTAGGAGGTATAGAATATTTGGAGACTTATTCTGA
- Protein Sequence
- MLRRMQFTERRVCKANFPTWLPRFKRPMAGGRGRRGGRARAGGDASSNENLKNLRALSASVLYFIDIVMRRLERSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNSPALTKSSRAFRRYRIFGDLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01543517;
- 90% Identity
- iTF_01543517;
- 80% Identity
- iTF_01543517;