Basic Information

Insect: Yponomeuta padella
Gene Symbol: -
Assembly: GCA_947311075.1
Location: OX371256.1:7454345-7469190[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00031 0.021 15.8 1.2 2 23 180 202 179 202 0.94

2 13 0.018 1.2 10.2 0.2 3 20 214 231 213 233 0.94

3 13 0.0077 0.52 11.4 1.2 5 23 245 264 242 264 0.92

4 13 0.0078 0.52 11.3 0.2 1 20 625 644 625 646 0.95

5 13 1.2 79 4.5 0.1 2 23 674 696 673 696 0.89

6 13 2.9 1.9e+02 3.2 1.3 1 23 719 741 719 741 0.96

7 13 0.002 0.14 13.2 0.4 1 23 745 767 745 767 0.98

8 13 0.011 0.72 10.9 1.8 1 23 772 795 772 795 0.92

9 13 0.036 2.4 9.2 0.4 2 23 803 825 802 825 0.93

10 13 0.0069 0.46 11.5 6.8 1 23 832 854 832 855 0.94

11 13 0.0035 0.24 12.4 0.5 1 23 861 883 861 883 0.97

12 13 1.7e-06 0.00011 22.9 1.2 2 23 890 911 889 911 0.97

13 13 0.0013 0.085 13.8 4.0 1 23 917 939 917 939 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00031	0.021	15.8	1.2	2	23	180	202	179	202	0.94
2	13	0.018	1.2	10.2	0.2	3	20	214	231	213	233	0.94
3	13	0.0077	0.52	11.4	1.2	5	23	245	264	242	264	0.92
4	13	0.0078	0.52	11.3	0.2	1	20	625	644	625	646	0.95
5	13	1.2	79	4.5	0.1	2	23	674	696	673	696	0.89
6	13	2.9	1.9e+02	3.2	1.3	1	23	719	741	719	741	0.96
7	13	0.002	0.14	13.2	0.4	1	23	745	767	745	767	0.98
8	13	0.011	0.72	10.9	1.8	1	23	772	795	772	795	0.92
9	13	0.036	2.4	9.2	0.4	2	23	803	825	802	825	0.93
10	13	0.0069	0.46	11.5	6.8	1	23	832	854	832	855	0.94
11	13	0.0035	0.24	12.4	0.5	1	23	861	883	861	883	0.97
12	13	1.7e-06	0.00011	22.9	1.2	2	23	890	911	889	911	0.97
13	13	0.0013	0.085	13.8	4.0	1	23	917	939	917	939	0.98

Sequence Information

Coding Sequence: ATGGACACTTACGTGATCAACGGCGTTTGCCGTTGTTGCGCCTCTCAGGGGTCCTCGAAAGACATCGATACCTCTTATACTTGGATGGGCGGCGAAGAAATCTACTCCAAAATGCTACGCGACTGTTTCGACATTGCCTTGTCCCGCTCCGTATCCGGACATGACGGTGGCATCTGTGAGTTGTGCGTTACTCAACTGCGCAATGCATACAACTTCAAGAAGCAAGTAGTCTCCACTGAAGAGATGCTAAAGAAGAGGTTAAACAGTGACCAGTTTAAACCGAGTTTGGTGAAAGTGGAGCTGGAGGTGCATCCGGAAAGGATCTCGGACTCTGACAATGACATGGGCGACCATATGGACCAGGACTCCGGCGATGACCACTCCACTAAAGAGTTCTTAGTGCCGATCAAGTCCGAGGTCCAGGAGGCTCCAGAGGTGAAACCGAAGCGCCGAGCCACCAAAGCGGGCACCTCCGCCGCCAAGAAGCCCAAACTCGAGGCTGAGACATCAAAAAGCCCAACCCGGACCGACGATTTGACCTGTCGAATATGCGACAGAGAATACTCGAAACTGTTTAACCTAAAGAGGCACTTGCAGCTGAACCACGGCCGAGAGGCGGACTTGTCGAGAAAAAGTCTCTGCGATTCTTGCGGCAAAACTTTCCTGAATCGAGATTCGCTCGCTAAACATTTGGCTAAGGGATGTCCCAAAAGTCTAGTGCGCGTCTGCATAAAATGCAACGTGGATTTCGCCACTAAATCGGCTATGTGCAGACATATGAACACGTTACATTGGTCTGAAGTTAAATTGCGATGTCCTCTGTGTTGCGATCAGTTTGATAATCACGAAATGTACGACCATCATCTGTACAGTGAACATCAGATAGAGTTGGATTTTAATGAAAAGTTTTTCGATTCCTTAGAAGATTTAACAAAATGGCAGCGTAATATAGAAAACAAAGATGGCGTCCATTTCCTAAAGCGCTGTTCACAAAATGGCGCCTGGGATTACCATTGCTTCCCCGTTGATATGCTATCGGGCCACAGGAGTGACAAACTGAAGGCATGTCCGGCAAGGATAGAAGTGGTCAAAAAGTATGGTGCATACATAGTGGTTTACCAATCCAAACATGTGTGCATCAAACACCCTGAGCGAAAACGGAGCAGACTGTTCTGTCCGCTGTGTTCTACTGGCATTGAGAAGTTCGGTAACATGTACGCGCATCTGTCAGCTGTACACGGGATCGAAATTGAGGACAAGAAATTGAGTTTTGATAGCTACAACGCCTTTCTGACTTGGAAAAAAGACGTTGAAAAAAACGGCCCACTCTACAAGCGCACCTCAACGGTCTCATCGAAAACCGGCGTAAAAGTGCAAAAATGTTATTACTTCTGCGCAAAATACGGCCCGTTTAGGCGCACGAAGAGCTCCGACACAGAATCCATGACGTGTCCAGCAAGGGTCCTTCTTACCAAAGAAGAGACCTCTGAATTATACGAAGTGCTGTACCAAAACACTCACCTGGGCCACGATCCTAAGAAAGACAAGAAACGGTTAACTTACGATGAAAGAAAAGAACTGGCTGATAGAATACGGAGCGGCGAAAGGCTTACGGACATAATAAACCAAGGGTCTGTCGGACTAGAGCGTCCAGACAAGAAGTTGAACAGGAATGTTTTGTACAATGTTGTGCGGGACTTTAAGATTGACAGGCGCGCGGACGGCGGTACCAAGAAAAAGCGCAAAACGAAAAAGAAGAAGAAATATTCAAAGGACAGTGCTACCCCGGAGCGCCAAGAGCACAGGGTCAACCTAACCACGATTCTACAGCACTCCAACGCAACCCCGTTCCGCGACAAGACTCAGCGCGGCTTCTCCTGCCTGTACTGCGCCAAGTACTTCAAACGCATCGATGAATTAAGGGCACACACCGCCCAGCAAACCGAGAAGGATAAAATCAACTCGATGATCGATTACAAACTTAGTTACAACCCAATCAAAGTGGACATCACAGATCTCCAATGCAAAATTTGCCAAATGGAGATCCAAGACTTGAACGAGTTGAAGGAACACTTGGTCGAGGAACACGGGAAGACGATACACAAGGGAATAAAGGACATCATCCTGCCGTTTGAGCTGCGCGACGGGACCAACTTCACGTGCGTCGTGTGCTCGGTCGTCCACATTTCCTTCAAGAACTTATACCTGCACATGAGCAGTCACTACAGAAATTACTGTTGCGATAAGTGCGGGGCGGGCTACATAACCATTGCCGCTCTCAGGAAACACGGCAAGACTCACGTGCAAGGGAACTTTCCCTGCGATTATTGCGATAAAACTTACACGTCCTTCACTAAGAAGAGGAACCACGAAAAGGGCGTCCACACCGGCGGGTGGCTCCGGAATAAGTGCCCGCACTGCCCAGAGATCTTCGTCAGCTACTACGACCGCTCTGAGCATCTGGTGAAGGTCCACAACGAGACGCCAATCATGCATCCCTGCAACGCCTGCAGTAAGGTATACAAAAAGAAATACGAACTCAGCCGTCATATCAAACATCACCATTTGCAGCTGAAGAATTTCATGTGCGATTCGTGCAATGCGACTTTCTTCTCCAAGCGCGGTTTGATCGATCACATGGTGAAACATATGGGTGGGGAGATCTGGACGTGTGACGTGTGCGGAAAAACGTTCTCGAGACAAAGAACCATGAAGGAACATTTAAGATCGCACGACGAAGACAAAAAGTTCCAATGCGAGATCTGCAATAAAACGTTCCTGCAGAAGTGTAGCCTCAAAAGTCACGTGAAACTGCACCAAGACGATCTGGACATATTCAAAGAGTTTGACGACGTGAAGCACTTGGTAGACAATAGAGATTTGACGCTGAAACAAATCGCGGCCGAGAATAAGAGTAGAGGGGAGACAATACTGTATGACCCGAAAATCGAAGACCAGAAGATCGAAATCAGAATAAAAGAAATCCAATAA
Protein Sequence: MDTYVINGVCRCCASQGSSKDIDTSYTWMGGEEIYSKMLRDCFDIALSRSVSGHDGGICELCVTQLRNAYNFKKQVVSTEEMLKKRLNSDQFKPSLVKVELEVHPERISDSDNDMGDHMDQDSGDDHSTKEFLVPIKSEVQEAPEVKPKRRATKAGTSAAKKPKLEAETSKSPTRTDDLTCRICDREYSKLFNLKRHLQLNHGREADLSRKSLCDSCGKTFLNRDSLAKHLAKGCPKSLVRVCIKCNVDFATKSAMCRHMNTLHWSEVKLRCPLCCDQFDNHEMYDHHLYSEHQIELDFNEKFFDSLEDLTKWQRNIENKDGVHFLKRCSQNGAWDYHCFPVDMLSGHRSDKLKACPARIEVVKKYGAYIVVYQSKHVCIKHPERKRSRLFCPLCSTGIEKFGNMYAHLSAVHGIEIEDKKLSFDSYNAFLTWKKDVEKNGPLYKRTSTVSSKTGVKVQKCYYFCAKYGPFRRTKSSDTESMTCPARVLLTKEETSELYEVLYQNTHLGHDPKKDKKRLTYDERKELADRIRSGERLTDIINQGSVGLERPDKKLNRNVLYNVVRDFKIDRRADGGTKKKRKTKKKKKYSKDSATPERQEHRVNLTTILQHSNATPFRDKTQRGFSCLYCAKYFKRIDELRAHTAQQTEKDKINSMIDYKLSYNPIKVDITDLQCKICQMEIQDLNELKEHLVEEHGKTIHKGIKDIILPFELRDGTNFTCVVCSVVHISFKNLYLHMSSHYRNYCCDKCGAGYITIAALRKHGKTHVQGNFPCDYCDKTYTSFTKKRNHEKGVHTGGWLRNKCPHCPEIFVSYYDRSEHLVKVHNETPIMHPCNACSKVYKKKYELSRHIKHHHLQLKNFMCDSCNATFFSKRGLIDHMVKHMGGEIWTCDVCGKTFSRQRTMKEHLRSHDEDKKFQCEICNKTFLQKCSLKSHVKLHQDDLDIFKEFDDVKHLVDNRDLTLKQIAAENKSRGETILYDPKIEDQKIEIRIKEIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01543281; iTF_01544314;
90% Identity: iTF_01543281;
80% Identity: -