Basic Information

Insect: Yponomeuta padella
Gene Symbol: zag-1
Assembly: GCA_947311075.1
Location: OX371257.1:3909941-3916599[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.047 3.1 8.9 1.2 1 23 226 248 226 248 0.96

2 10 0.00057 0.038 14.9 3.1 1 23 255 277 255 277 0.97

3 10 0.00045 0.03 15.2 0.7 3 23 312 333 311 333 0.97

4 10 0.048 3.2 8.8 6.1 1 23 336 359 336 359 0.95

5 10 0.00012 0.008 17.0 1.3 2 23 366 388 365 388 0.96

6 10 0.009 0.6 11.1 1.2 3 23 401 423 400 423 0.90

7 10 5.5e-05 0.0037 18.1 2.8 1 23 431 454 431 454 0.94

8 10 0.0048 0.32 12.0 3.1 1 23 460 483 460 483 0.97

9 10 2.2e-05 0.0015 19.4 0.1 1 23 492 514 492 514 0.97

10 10 0.00081 0.054 14.4 0.1 1 23 520 543 520 543 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.047	3.1	8.9	1.2	1	23	226	248	226	248	0.96
2	10	0.00057	0.038	14.9	3.1	1	23	255	277	255	277	0.97
3	10	0.00045	0.03	15.2	0.7	3	23	312	333	311	333	0.97
4	10	0.048	3.2	8.8	6.1	1	23	336	359	336	359	0.95
5	10	0.00012	0.008	17.0	1.3	2	23	366	388	365	388	0.96
6	10	0.009	0.6	11.1	1.2	3	23	401	423	400	423	0.90
7	10	5.5e-05	0.0037	18.1	2.8	1	23	431	454	431	454	0.94
8	10	0.0048	0.32	12.0	3.1	1	23	460	483	460	483	0.97
9	10	2.2e-05	0.0015	19.4	0.1	1	23	492	514	492	514	0.97
10	10	0.00081	0.054	14.4	0.1	1	23	520	543	520	543	0.93

Sequence Information

Coding Sequence: ATGTTAAAAAGTGGCGGCGGCAGGCCCGCGAGGCGGTCTCGCCATGCCGTTGGCGTATGTGCTACCTGCCTCGCCGCTGACAGAACACTCTTCTCCCTTCGGAAGACTCCGCAGTATGTGAACATCTGCTCTGGACTTACTTTATCAACAGCCGACAAGGTGTGCTTTGAGTGCCGGGCGAAACTTGGCAATTTTGTCAAGTTCCGGAGCCGTGCGCTGCGTGCGGAAGAACTGCTGGCGTGTGTGCCGCCCAGCTGTAATTTGAAGATTCCCAATATTTTCTCCACTTCTGGGATCAAATGTCTCTCAACATTAACAGAAACATTTGTATCACCATACAATACCATCTACATAGACCGTAGCTTAGATGGAGTAAAGGAAGAGGACTGTGGATCGGACTCAGAAGTCAAACAAGAGGCATCAGAGTCTCTATTGATGACAGTCGAGTCACACTTTACTCCGATGGAAGACAGCTTCAAGACCGTGAATTGTAGATCAACTGAAGATGGGAAAGCAACTGATGTGAAGATTACAGCGGAAGATACTTTAGAGGTTGACGTTGACTTGAAACAGCAAAATTACCAAACAGAATTCGTAGTGAGGCCAATAGATCGCAGCGAGTTACTGGCCTACTTTGAACGCGAGAGAGCCACTAAGCGATACAAGAGCGCTCCATACAAGTGTCACACGTGCGCGCTGCCGTTTCGACTGGAGGAGAAACTGAATATTCACAACCAGCTTCATAGTGAAGAACGGGGAAATTTCAAATGTGAAATCTGCAAGCAGAGATGCAAGGACAGTGCAACGTTGAAACAGCACACGGAGTTACATTATAGAAGCTACGGCTGTCCGCGGTGCCCGCGCACCGACTACAACCTCCACAGAATCACACTGCATTACAAGCAGGTTCACGACGACGTAACCGCGCGCGCATGCAGAAAATGTCCCGCGCGCTTCACCACGGCCCTCGAGCTCAGACGCCACGTCCGAAAAAGGCACGAGAAACACATATGCCACCTCTGCAACCGACAGTACACCTCCAAACTCGGCTTAGACCGCCACCTGCGTCATAGTCACACGAAGGTGCGACCGCTCCAGTGCCCCTTCTGCCACAAGACCTACAAAGGCGCCCTGAACTTGAAAGCGCACGTGCGTAATTACCACGAGACTCCGAGCGAACACAAACGCGAAGACGCTTACTGCGCGGAGTGCGACATACAGTTCAAGGACCAATACAGGTACAAAACGCACCTCAAGTCGTCCAAGCATCTCTCGGACGGCGAGTTCAACTACTGCTGCGACCACTGCGGCAAGACTTACGCGCAAAAGATGAGTTTAATCTCTCACATCGAGGAGAAACACTTGAAGTTGGCCCGGTACAAATGCGACGTCTGCGACGAGAGGTTCCATTCGAAAGCGTACGCGCTGAAGCATTCTCGAAAGAGGCATAGCAACCGGCCGAAGATTAATAAACACGTGTGCGAAATCTGCGAGAAGGCCTTCGCCATACCTAAGTCTCTGAGAGATCATATGAACATCCATAACGGCGTGCGTCCATACGAGTGCGAGCAGTGCGGAGCGACGTTCGCGTATTCGGCCGCCCTATACAACCATAATCAGCTGGTGCACTTGAAAAAGAAGAGGGGGAGCCGGGCCCTCGATTGA
Protein Sequence: MLKSGGGRPARRSRHAVGVCATCLAADRTLFSLRKTPQYVNICSGLTLSTADKVCFECRAKLGNFVKFRSRALRAEELLACVPPSCNLKIPNIFSTSGIKCLSTLTETFVSPYNTIYIDRSLDGVKEEDCGSDSEVKQEASESLLMTVESHFTPMEDSFKTVNCRSTEDGKATDVKITAEDTLEVDVDLKQQNYQTEFVVRPIDRSELLAYFERERATKRYKSAPYKCHTCALPFRLEEKLNIHNQLHSEERGNFKCEICKQRCKDSATLKQHTELHYRSYGCPRCPRTDYNLHRITLHYKQVHDDVTARACRKCPARFTTALELRRHVRKRHEKHICHLCNRQYTSKLGLDRHLRHSHTKVRPLQCPFCHKTYKGALNLKAHVRNYHETPSEHKREDAYCAECDIQFKDQYRYKTHLKSSKHLSDGEFNYCCDHCGKTYAQKMSLISHIEEKHLKLARYKCDVCDERFHSKAYALKHSRKRHSNRPKINKHVCEICEKAFAIPKSLRDHMNIHNGVRPYECEQCGATFAYSAALYNHNQLVHLKKKRGSRALD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01543258;
90% Identity: iTF_01544291;
80% Identity: -