Basic Information

Insect: Yponomeuta padella
Gene Symbol: -
Assembly: GCA_947311075.1
Location: OX371256.1:7448418-7452951[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00023 0.016 16.1 0.7 1 23 103 126 103 126 0.92

2 15 0.21 14 6.8 0.9 2 23 203 225 202 225 0.94

3 15 0.002 0.14 13.2 0.7 1 23 229 252 229 252 0.93

4 15 0.013 0.89 10.6 0.4 1 23 258 281 258 281 0.95

5 15 0.62 42 5.3 3.0 2 23 289 311 289 311 0.90

6 15 0.0011 0.07 14.1 2.4 2 23 317 339 316 339 0.95

7 15 0.00066 0.044 14.7 0.2 1 23 402 425 402 425 0.96

8 15 0.32 21 6.3 0.0 2 23 451 473 450 473 0.92

9 15 0.0018 0.12 13.3 1.5 2 23 497 518 496 518 0.96

10 15 0.0028 0.19 12.7 0.8 1 23 522 544 522 545 0.95

11 15 0.54 36 5.6 1.4 1 23 551 574 551 574 0.87

12 15 0.15 10 7.3 5.1 2 23 582 604 581 604 0.94

13 15 0.00015 0.0097 16.8 1.1 2 23 610 632 609 632 0.96

14 15 2.6 1.7e+02 3.4 2.1 1 23 638 660 638 660 0.93

15 15 3.9e-07 2.6e-05 24.9 0.9 1 23 666 688 666 688 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00023	0.016	16.1	0.7	1	23	103	126	103	126	0.92
2	15	0.21	14	6.8	0.9	2	23	203	225	202	225	0.94
3	15	0.002	0.14	13.2	0.7	1	23	229	252	229	252	0.93
4	15	0.013	0.89	10.6	0.4	1	23	258	281	258	281	0.95
5	15	0.62	42	5.3	3.0	2	23	289	311	289	311	0.90
6	15	0.0011	0.07	14.1	2.4	2	23	317	339	316	339	0.95
7	15	0.00066	0.044	14.7	0.2	1	23	402	425	402	425	0.96
8	15	0.32	21	6.3	0.0	2	23	451	473	450	473	0.92
9	15	0.0018	0.12	13.3	1.5	2	23	497	518	496	518	0.96
10	15	0.0028	0.19	12.7	0.8	1	23	522	544	522	545	0.95
11	15	0.54	36	5.6	1.4	1	23	551	574	551	574	0.87
12	15	0.15	10	7.3	5.1	2	23	582	604	581	604	0.94
13	15	0.00015	0.0097	16.8	1.1	2	23	610	632	609	632	0.96
14	15	2.6	1.7e+02	3.4	2.1	1	23	638	660	638	660	0.93
15	15	3.9e-07	2.6e-05	24.9	0.9	1	23	666	688	666	688	0.98

Sequence Information

Coding Sequence: ATGCCGGGACTTGAACCCGCGACCTCTGGCTTCGAGATCTTTTTCTACTGGTTTGTCGGCGTAATAAATTATGTCGTCTCTGTGCTAAGCCGCGGTAAGGCCCCGAGAGCCACCAAAACTCAACGGAAAATACCCGCAAGAACTACCCTCAAAGCAGGACAGGCCAGTTGCAGTCGGGGAATTGTAAGGGAGAGACTTCTGGAAACCGACCCAAACTGTACTGAACTGGACAAGCAGTACAATAACATGTCCGCCATATTGAAATTCTCGAACGCAACTCCGTTCCGCGGCAGAAACGCACTCGGCTACGTGTGCGCTTATTGCAGGAACACTTTCCCGGACCCCGGAAACTTACGCCGGCATACCCACGACGATCACGCCAAGCATTTACTCGCCTATATTAGCGTGAAGAATCTCGACAAACTGGACATTTACTTGGACACGACCGATTTGAAATGCACGATCTGCGACGCACGGTTAACGAAAGACTGCGGCGACGATTTAAAGGGGTTTGGCGAGCATCTAGCCGGGGCGCACGGCGAAAAGTTTTACACAGAAATAGGCGACTTTATCTATTCTTTCAAACTGACCACGGATGCTCTAATGAAATGCTGTTTATGTGCTGCAAGTTATTCGACTATGAAAGCGCTTTTGGAACACATGAACGACACGCACTTCAAAAACTTCATTTGCCCACTGTGTGGCTGTGGGTTTATCAACCGACAGAAGCTGAAATTGCACGAGGCATCGCAACACAACTCAAAAAAATGCTTCGTCTGTCCACACTGCGAAGAGAATTTTGATACGCCGTGGCGGAAAAGAGTGCACGTAAATTCGGTACACAGAGGCGGAGTTGGGCGCAATGTATGCCGTATATGCCAAGCTACCTTCAAGGAGTGTTACCAGAAACACAGACACATGGTGGAGGCACATAATCACCCCCCTCTGAAATGCGAAGAGTGTGATAAAGTGTTTTATCTAAAGTCGCGGCTCCTCCTGCATCATCGGCAGACGCATGCCAAAGAACGACCTTTTGAATGCGATATCTGGAAGGCCAGGGCAGCAACTGGCTCCGACAAAAGACATACGGCACTCGCGGATGAGGAGCGACAATTGACAGAAATAGACAAGCAATATAGCAACATATCCACTATCCTGAAGTTTTCGAACGCTACGCCCTTTCGTGACAGGAACGCCCTGGGATACGTGTGCGCTTATTGCAAAAACACCTTCCCGGATCCAGAGGACATGCGTGTACACACCCGCGAGAAACACTCCAAGCATTTACTCGCCTACATAGCCGGCAAGAAGTTGGAGAAACTAGTCGTCTGCctcgatatcatgaacttgaaatgcaccatatgcaacgagatggtcgacgacatcaaacagttgggcgagcacctggtcaaagcgcacgaaaagaaatactacaccgacatcggtgaatacatccagccgtttaaattgaccattgacaagtacatgcagtgttgcctgtgcactgagagtttcaccagcatgaaaggtctcattcagcacatgaacgcgcacttccgtaacttcatatgcacgatttgtggcgctggctttattaacttcgagaggctaaagtctcatgagacgacgcaccacaaggcgaagaaatggttcatctgctcgcactgcaaagagaagttcgacgcggagtggaagaagaagaaacacgtgaacgcggtccacagaggcgtggcgggaccgaacaagtgtcaggtgtgcaaggcaacgttcgccagttgctaccagaagaacaagcacatgatagagtgcCACAATCAGGCGCCACTCAAATGCGAAATGTGCGATAAGAGCTTCGTAATAAAGTCGACGTTGCTCCTCCACTTCCGTCGGACACATCTCAAGGAGCGACCGTTTCAATGCGACATCTGCTACATGGGATTCTTCTGCAAGACGCGCCTGACGGAAcatctggtcgtgcacaccggcgagaagcagttcagttgtgaaatgtgcggacaggccttcgctcggaagaagaacttgcgactgcatttgaagacgcacaaGTAG
Protein Sequence: MPGLEPATSGFEIFFYWFVGVINYVVSVLSRGKAPRATKTQRKIPARTTLKAGQASCSRGIVRERLLETDPNCTELDKQYNNMSAILKFSNATPFRGRNALGYVCAYCRNTFPDPGNLRRHTHDDHAKHLLAYISVKNLDKLDIYLDTTDLKCTICDARLTKDCGDDLKGFGEHLAGAHGEKFYTEIGDFIYSFKLTTDALMKCCLCAASYSTMKALLEHMNDTHFKNFICPLCGCGFINRQKLKLHEASQHNSKKCFVCPHCEENFDTPWRKRVHVNSVHRGGVGRNVCRICQATFKECYQKHRHMVEAHNHPPLKCEECDKVFYLKSRLLLHHRQTHAKERPFECDIWKARAATGSDKRHTALADEERQLTEIDKQYSNISTILKFSNATPFRDRNALGYVCAYCKNTFPDPEDMRVHTREKHSKHLLAYIAGKKLEKLVVCLDIMNLKCTICNEMVDDIKQLGEHLVKAHEKKYYTDIGEYIQPFKLTIDKYMQCCLCTESFTSMKGLIQHMNAHFRNFICTICGAGFINFERLKSHETTHHKAKKWFICSHCKEKFDAEWKKKKHVNAVHRGVAGPNKCQVCKATFASCYQKNKHMIECHNQAPLKCEMCDKSFVIKSTLLLHFRRTHLKERPFQCDICYMGFFCKTRLTEHLVVHTGEKQFSCEMCGQAFARKKNLRLHLKTHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01543228;
90% Identity: iTF_01543228;
80% Identity: -