Ypad003273.1
Basic Information
- Insect
- Yponomeuta padella
- Gene Symbol
- ZNF296
- Assembly
- GCA_947311075.1
- Location
- OX371253.1:2321878-2348606[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00065 0.044 14.7 3.4 1 23 254 277 254 277 0.97 2 10 0.5 33 5.7 1.6 1 23 310 333 310 333 0.92 3 10 2e-06 0.00013 22.7 1.4 1 23 340 363 340 363 0.97 4 10 2.8e-05 0.0019 19.0 0.6 2 23 369 391 368 391 0.95 5 10 1.9e-06 0.00013 22.7 2.9 1 23 401 423 401 423 0.97 6 10 0.0036 0.24 12.4 1.3 1 22 429 450 429 454 0.91 7 10 0.00012 0.0078 17.1 1.9 1 23 462 485 462 485 0.96 8 10 1.3e-05 0.00089 20.0 0.9 1 23 491 514 491 514 0.97 9 10 0.00012 0.0081 17.0 0.3 1 23 523 545 523 545 0.98 10 10 2.3 1.5e+02 3.6 0.0 1 23 551 574 551 574 0.90
Sequence Information
- Coding Sequence
- ATGAGCATTGCAACTCTCCAAAATTCAGTTTTACACATATTACAGGACGGAGATTTGATTCTGTGCACATTGTGCAAGAAACAGGCCGAGTACTTTGAATCCTTCATTCAAAATGTGACTCAAGCACAGAAGCTTTTTCAAGGAGTTGGCATGATAGAAGCCTCTACACTGCACACAATTAAAGCTGAACTAGCGCTGCCAACTAAGTCTCTGGCCAAACAGACCCTGGAATCCATCGACGTAGGCTTTGAAACAGATGAAAGCACATCAATCGCTGAGGGGAACTACATAGTGTATAGTTGCAACAAAAGTCGCAACGTTGACGTAAAATTGGTGGTGAAACAAGAAAGTTCGGCCAACGATTTGGACGATGGGTTTCTTGATGAGGATGATCTAGCCCTATCTTATCACAGCATAAAAGATGAAACCAATCCGCAGACAATAAAGCAAGAGGTGGAGGCAGAGGAAATACTCGACAAATACGCAATAATCTACACGAAGAAGAAGAAACGCAAATCGAAAGAGAAAATATTTAGCAGAGTGAAAAAAAGGACGAAAGGAATTTTGCCCAGCGAAAATGAAAGCGAGAACAAAACTGAAGCGAAGGAATATGACGCTGATGCAGCCGTCACTCCTGGTGTAAATACGAATGAAAGGAAAGAAAGAGCCAATGAAATCAAACTACTGCGAAGTTCGCGCGAGGAATGCCTCCGCGAGAGGGAGCAGCTTGCCCAGGACGAAAAGTACCTGCGTCAGCCGCACAAGTGCACCGACTGCGTCAAGGGGTACCCGTACAGGGACACGTACGAGAAACACATGAAGCGCTTTCACGATAAGGCCATGGGTAAATTCATCTGCAGCATTTGCAAGCAAAGGCGGGACACTTACGAAAAACTAAAATTCCACTCGCAATATCATAAAGTTCGCTACAGATGTCGGCACTGCGGCCTGACGAGGTCTGCGCGGCGGACTATAGAACAACACTATGTCACTGTTCACTCCACCAGTCCGCAGATCTACATATGCCCCACTTGCTCCAAGACCTATAAACGTGCGTTCTCACTCCGGAAACACATACGCTACGTGCACTGCAAAACGCGCGTCGTCTGTGAACATTGCCAAAAAAGCTACGCCAACAAGGAGGTGCTAAGGAAGCACATGATGGAGATCCACATAAAGGAGGAGTTGCCCCTAAAAATCCACGTGTGTGACGTCTGCGACAAATGCTTCAAGGCTCCCTCCCTGTTGAAGAAACATATGATTAAGCACACCGATAGGAAGGACTTCTACTGTGTTGAGTGCGATAAAAGTTTTAAATCGGATACGATTCTGAAGCATCACTTGAAGACTGCCACACCTCATGTTAACTACTTAGACTTACATCACCCTTGCCTCCTCTGCGAGAAGCGGTTCTCGAACCGAAGAGACCTGGATAACCACATGAACAGCCAGCACCTGAAGGTGAAGCCATTCCAATGTGACAAATGTGATAGGTCGTACGTGAGCAAATGGTCGCTAAAAGACCACAAGCGACTCGCCCACGACGGCTACAAACGGCCGCTAGCGTTCCCCTGCCCCATGTGTGATAAGGTCTTCGACCGGAACCAGATCCGCAAGGCGCACATTCGCACGCACACGGGCGAGCGGCCGTACGCGTGCGCCGCGTGCCCCGCCAGCTTTGCGCAGGCCTCCGTTCGCAGCACGCACGTCAAGCTGGTGCACCTCAAGCTCACCAGGGACGGCCAGGCTAAACAGCGGCTTAAGTGA
- Protein Sequence
- MSIATLQNSVLHILQDGDLILCTLCKKQAEYFESFIQNVTQAQKLFQGVGMIEASTLHTIKAELALPTKSLAKQTLESIDVGFETDESTSIAEGNYIVYSCNKSRNVDVKLVVKQESSANDLDDGFLDEDDLALSYHSIKDETNPQTIKQEVEAEEILDKYAIIYTKKKKRKSKEKIFSRVKKRTKGILPSENESENKTEAKEYDADAAVTPGVNTNERKERANEIKLLRSSREECLREREQLAQDEKYLRQPHKCTDCVKGYPYRDTYEKHMKRFHDKAMGKFICSICKQRRDTYEKLKFHSQYHKVRYRCRHCGLTRSARRTIEQHYVTVHSTSPQIYICPTCSKTYKRAFSLRKHIRYVHCKTRVVCEHCQKSYANKEVLRKHMMEIHIKEELPLKIHVCDVCDKCFKAPSLLKKHMIKHTDRKDFYCVECDKSFKSDTILKHHLKTATPHVNYLDLHHPCLLCEKRFSNRRDLDNHMNSQHLKVKPFQCDKCDRSYVSKWSLKDHKRLAHDGYKRPLAFPCPMCDKVFDRNQIRKAHIRTHTGERPYACAACPASFAQASVRSTHVKLVHLKLTRDGQAKQRLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01544328;
- 90% Identity
- iTF_01546941; iTF_01543253; iTF_01544328;
- 80% Identity
- -