Basic Information

Insect: Yponomeuta padella
Gene Symbol: -
Assembly: GCA_947311075.1
Location: OX371256.1:7354789-7360763[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0084 0.57 11.2 0.1 2 23 45 67 44 67 0.96

2 16 0.00012 0.0079 17.1 1.8 1 23 117 140 117 140 0.95

3 16 0.0021 0.14 13.1 5.0 1 23 143 166 143 166 0.96

4 16 0.32 21 6.3 0.8 1 23 172 195 172 195 0.93

5 16 0.0026 0.17 12.8 0.4 2 23 203 225 202 225 0.96

6 16 6.2 4.1e+02 2.2 0.1 1 10 230 239 230 249 0.75

7 16 0.0084 0.57 11.2 2.4 1 23 303 326 303 326 0.96

8 16 1.6 1e+02 4.1 0.2 2 23 352 374 351 374 0.95

9 16 0.3 20 6.4 2.1 3 23 398 419 396 419 0.91

10 16 0.00074 0.05 14.6 0.2 2 23 425 447 424 447 0.94

11 16 0.0011 0.073 14.0 2.8 2 23 453 475 452 475 0.95

12 16 0.053 3.5 8.7 0.6 2 22 482 502 482 504 0.83

13 16 0.00054 0.036 15.0 4.7 1 23 511 534 511 534 0.97

14 16 0.023 1.6 9.8 0.1 1 23 540 562 540 562 0.95

15 16 2.8e-05 0.0019 19.0 2.3 1 23 568 590 568 590 0.98

16 16 8.2e-06 0.00055 20.7 0.8 1 23 596 618 596 619 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0084	0.57	11.2	0.1	2	23	45	67	44	67	0.96
2	16	0.00012	0.0079	17.1	1.8	1	23	117	140	117	140	0.95
3	16	0.0021	0.14	13.1	5.0	1	23	143	166	143	166	0.96
4	16	0.32	21	6.3	0.8	1	23	172	195	172	195	0.93
5	16	0.0026	0.17	12.8	0.4	2	23	203	225	202	225	0.96
6	16	6.2	4.1e+02	2.2	0.1	1	10	230	239	230	249	0.75
7	16	0.0084	0.57	11.2	2.4	1	23	303	326	303	326	0.96
8	16	1.6	1e+02	4.1	0.2	2	23	352	374	351	374	0.95
9	16	0.3	20	6.4	2.1	3	23	398	419	396	419	0.91
10	16	0.00074	0.05	14.6	0.2	2	23	425	447	424	447	0.94
11	16	0.0011	0.073	14.0	2.8	2	23	453	475	452	475	0.95
12	16	0.053	3.5	8.7	0.6	2	22	482	502	482	504	0.83
13	16	0.00054	0.036	15.0	4.7	1	23	511	534	511	534	0.97
14	16	0.023	1.6	9.8	0.1	1	23	540	562	540	562	0.95
15	16	2.8e-05	0.0019	19.0	2.3	1	23	568	590	568	590	0.98
16	16	8.2e-06	0.00055	20.7	0.8	1	23	596	618	596	619	0.96

Sequence Information

Coding Sequence: ATGGCCGACGTAGATACCCTTACCAGACACACGGAGACCAAACACCAGATGAACATCGAAGAGCTAGAGGCGTTCATACCAAAGAGGATAATTTCCAAAGACGTCCCTATCAAGGTTGACGTGAGACACGTTTCGTGTAAGGAATGCAGGGAGCCCATGAGCAATTTGGACGAACTAATGAGTCATATCAAAACAGCGCATGATGAGGAATACGATTACGACGCCGGAGTTTGCGTCTTCCCGTTTGTGTTGACGAGGGACATCCACTGTTGCGTCCTGTGCGAGGATAAATTCGACAACTTCCCGTGCATGATGACGCACATGTACAAGAAGCACATAACGCACTCGTTTATTTGCCAAATATGTGGTCGCTCCTTCAAAGATCAGGTCCGCATGAAGCGGCATTTTAAGAATAGCCACATAGGTTTCCGTTGCAAGCACTGCGGAAAGATGTTTGACGGATTTCACAAGTTAGACAGGCATAAGCAGATAATACATGGCCAGACAAAGGCTCACAACTGTTTGCTGTGTAGCGCAACCTTCCAGAATGATTACCAGGTCAAAGTGCACATGGGCAAAGCCCACAACGTTGAGAAGTATAGGGTCAAATGCGAGCTTTGTCCTAAAGTATGCTCGACCAAAGGAGCCATGTTACTTCACGTACAATCAATGCATTCTGAGGCTAAGTTTGAGTGTGATGTGTGCGATTACAAAACTGGCATCAAGTGGGTGTTAAAACTTCATAACCACAACGAATCGACGTCCATTAAAGACCTTACAAAAACGAGCACGCCCGAAAGAATGGAAAAAGAACAATTGTCTAAGAAAAAGTCACGTGTACGGGAGAGTTTCCTTACCATCCTGGAAACAAGTACCGTAATGCCTTTCAGGATCCACGGCACAGCCTACAGATGCTTCTACTGTCGGACCAACTTCCAAAGCGTCAAACAGCTGAAGGAGCACACCAGAGCTGAACACACCGGTCCTAACGACTGGGGGGTGACCGCAAAGTACGGTGGCAACGTTCTGCTAAAACTTGACGTAACGGATATAAGGTGTCGCGTCTGCAACATAAAGATGGAGAACTTCGATTTTCTGCTCGACCACTTGAGGGTGGTACACCAAAGGATCTTGGAGAGCGACATAAAGGAAAACCTTATTCTATTTAAACTGAGCGATGAAATGTCGAAATGCATTCTTTGTGACGTTGTGTTTAATAAATTCCACGCGCTCTTGTCCCATATGCACATGGATCATAAGGGGCACGCGCTCAGCTGCGAATACTGCGGGATAAGCATGTCGACAGAGTCGGGCTTAAAAAGGCACATAGAAAATAAACACGGCGAGAAGCAGGTCAAATGTCGACACTGCGATAAGGTGTTCACTTCAAACGCTAACAGATCTAGCCACGAGAACCGAAGCCACGGCGACGAGAAGACACGGCAATGTAACATCTGCAACGAGGTCTTCTCGAGCCATTTCACGAGGGATTCCCATCTGGCGGCAGTCCACGACGTGTGGGCGGCCAGATACGAGTGCGAACAATGCAACCTGGTCTTCAGATTGAAGCATCACCTGAGCCGGCACAACAGGCGCGTCCACCAAAAGGAGAGGAAGTTCGAGTGTGACGTTTGCGGGTCCAAATACTTCCTCTTGTCCGACTTGAAGGCACACTCTGCCGTCCACACGGGCGAGAGACCGTTCGAGTGCACCGTGTGCAACAAAACTTTCATGAAAAAGAAGGATCTGATGTATCACACGAGAATCCATACGGATGACAGGAGATACGTGTGCCGCTTTTGCGGCCAAGCGTTCATCCAGCCGACGAGCTTGAGACTGCATCTTAGAGTGCACCATTCGGCCGAGCGCCAAGCCCCTGAGCCTCAGGGCAGCGGATTGAATTCGGCTTTAAATGAGTCGCCCAACCCGGAGGAGGAACAATCTTAA
Protein Sequence: MADVDTLTRHTETKHQMNIEELEAFIPKRIISKDVPIKVDVRHVSCKECREPMSNLDELMSHIKTAHDEEYDYDAGVCVFPFVLTRDIHCCVLCEDKFDNFPCMMTHMYKKHITHSFICQICGRSFKDQVRMKRHFKNSHIGFRCKHCGKMFDGFHKLDRHKQIIHGQTKAHNCLLCSATFQNDYQVKVHMGKAHNVEKYRVKCELCPKVCSTKGAMLLHVQSMHSEAKFECDVCDYKTGIKWVLKLHNHNESTSIKDLTKTSTPERMEKEQLSKKKSRVRESFLTILETSTVMPFRIHGTAYRCFYCRTNFQSVKQLKEHTRAEHTGPNDWGVTAKYGGNVLLKLDVTDIRCRVCNIKMENFDFLLDHLRVVHQRILESDIKENLILFKLSDEMSKCILCDVVFNKFHALLSHMHMDHKGHALSCEYCGISMSTESGLKRHIENKHGEKQVKCRHCDKVFTSNANRSSHENRSHGDEKTRQCNICNEVFSSHFTRDSHLAAVHDVWAARYECEQCNLVFRLKHHLSRHNRRVHQKERKFECDVCGSKYFLLSDLKAHSAVHTGERPFECTVCNKTFMKKKDLMYHTRIHTDDRRYVCRFCGQAFIQPTSLRLHLRVHHSAERQAPEPQGSGLNSALNESPNPEEEQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01543179; iTF_01546861; iTF_01544183;
90% Identity: iTF_01543179; iTF_01546861; iTF_01544183;
80% Identity: -