Basic Information

Insect: Yponomeuta padella
Gene Symbol: -
Assembly: GCA_947311075.1
Location: OX371240.1:9129011-9150702[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00021 0.014 16.3 0.9 1 23 135 157 135 157 0.95

2 11 3.6e-05 0.0024 18.7 0.5 1 23 163 185 163 185 0.97

3 11 2.2e-05 0.0015 19.3 1.0 1 23 286 308 286 308 0.98

4 11 3 2e+02 3.2 0.3 2 23 315 337 314 337 0.89

5 11 0.00059 0.04 14.9 0.2 3 23 395 416 393 416 0.90

6 11 0.0053 0.36 11.9 0.2 1 23 431 453 431 453 0.96

7 11 3.5e-05 0.0024 18.7 0.2 1 23 478 500 478 500 0.98

8 11 0.0007 0.047 14.6 0.2 1 23 506 528 506 528 0.97

9 11 0.0004 0.027 15.4 0.3 1 23 534 556 534 557 0.95

10 11 0.0042 0.28 12.2 1.7 1 23 570 592 570 592 0.96

11 11 0.0043 0.29 12.2 0.1 1 20 743 762 743 765 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00021	0.014	16.3	0.9	1	23	135	157	135	157	0.95
2	11	3.6e-05	0.0024	18.7	0.5	1	23	163	185	163	185	0.97
3	11	2.2e-05	0.0015	19.3	1.0	1	23	286	308	286	308	0.98
4	11	3	2e+02	3.2	0.3	2	23	315	337	314	337	0.89
5	11	0.00059	0.04	14.9	0.2	3	23	395	416	393	416	0.90
6	11	0.0053	0.36	11.9	0.2	1	23	431	453	431	453	0.96
7	11	3.5e-05	0.0024	18.7	0.2	1	23	478	500	478	500	0.98
8	11	0.0007	0.047	14.6	0.2	1	23	506	528	506	528	0.97
9	11	0.0004	0.027	15.4	0.3	1	23	534	556	534	557	0.95
10	11	0.0042	0.28	12.2	1.7	1	23	570	592	570	592	0.96
11	11	0.0043	0.29	12.2	0.1	1	20	743	762	743	765	0.93

Sequence Information

Coding Sequence: ATGGATGCTGAAACATTTAGCCTCCGCTGGGAGGAGGAGGAGAGGGCACGGACTCCTGGTGTGGCAGCATGCGAGGAAGTCATTTACAATACGCAGTCTACTTCCTATTCTAACATAGAGGGCGAAACAATAATACCAGATACAGACCAGATGGCAGCTGAAAATCTGATGTACCTGGCCCAGGACATCAGCTACACGGAGGTGGCCGAGCTCGTGGATGACCAGGGAGTTGAATGTGTCACCGAGGAAGTCATCACGGATGACTGGGTGGTGCCAGGAGGCCAGGAGAGGGTGGAAGTACCATTGGAACAACTAACACAGCCCGTACCCGACATGAAGGATGACAATGATATTGATGTGCCATTGCCAACAGATCAAGACGAGTACACGGCGATGCGTCCCTACCCGTGCGACTTTTGCTCGCGTCGCTTCCGCAAGAAGAACTCCCTCGTGAACCACATGGTGGCGCACCAGAGCGACCGCCCGCACGTCTGCAACCTCTGCGGCGTCCGCTACGTGCGCAAGGCTGACCTCATGAACCATCTGAAGGTGCACGCTTTCGTCCCGGAGCACCCCGACGAGATGGAGTATGACGATGTGCTAGAAAATCATCTGGTCGTCAAATCCAAAAAGAAACGGGGACGACGAAAAAAGCCAATTCCAAAGCCGCCAAAGGAGAACGGCGAGATGTGGGAGAACATGACGTCGGCGCGTACGCAGCAGTGGTCGCGCAAACGCACGGCGGCCGAGCCTCGCGCCTCGCTCCCGCCGCCCTCGCCGCCCTCCCCGCCCTCCTCGCCCTCGCCCGCCGAGCCGCCCTCCCCGCCCCCGCCGCCCGCTGACCCGCGCCGCCCTTTTACGTGCAAACACTGCGGCATCGGCTTCGCGCGCGAGAAGGCGCTGCAGTCGCATTCTAGGGTGCACGGGGGGGAGTCCCCGCTGGAGTGCGGCGCGTGCGGCGAGCTGTGCTGGTCGCGGGAGGCGCTGGCCTCTCACCAGCGGCGCCGCCATCCGAACATGCCCGCGCCCGCGCCCCCCGCGCCCGACTACCGCGCCCCTGACTCCGAAGACGAAGATGACGACGACATCGATTACCGTCTCTCTCCATCCGCGGAAAGCGGCGGGGCGGGCGGCGGCGGCGAGCGGCCGATATATGACACGGTGCGAGGGCCGGAGTTGTTCTGCCAACACTGCGGCGTGGCTTTCCAACGGGCAGACCTACTGAGGCGCCACGTAGCAGCCGCTCACAGCTACAAGCGGCACGACAGCGCGGGCTCGTCGGGCTGCGAGCACACGTGCGGCGTGTGCGGCGAGACCTGCGCCGACGCGCTGCAGCTGCTGGCGCACGCCGAGCGACATGCCGCGCCCGACCACAGAGTAAAAAGCAGAAGTAAGAGTCGGATCAACACAACGTTAAGCAGTTCAAGACAGTTCCCCTGTAGAGAATGCGGCAAGGTGTTTGGCTCGCGGTCGTCACAACAGATTCACGTGCGGATCCACACGGGCGAGCGGCCCTACGCGTGTCGGTTCTGCTGGAAGGCATTCGCGGACGGCGGCACGCTTAGGAAACATGAGCGAATACACACTGGCGAGAAGCCGTACGCGTGCGCGGTGTGCCCGCGCGCGTTCAACCAGCGAGTGGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGCCGCGCCAGCGGAGGCCCGTCATACTGCTGTGTGGTGTGCGGGCGGACGCTGCACTCGAGTTCGGAGCTGGTCCAGCATCTCATACAGCACTGCGACGCAAATACAGCGCTGCGTCGGCAGCCGCAGTCGGGCCCGCGCAAGTACAAGCGGCGAAAAAAGCAGAAGCCGGAGCTCTCGCCGTCGTCGGAGAAGCCCGAGTGGTCCCCCCCGCCGTCCCCGCCGCCCGCGCCCCCCCCGCCGCGCGCGCGCCGCCGCCGCGCCGCCTCGCCGCCGCCGCGCCCGCGCATGATACACACCGCCGAGGACACTAGGCCCAGGACCAAGCAGGTTCGCAACCGGCGGCCGCCGCGGCACCCCGCGGACGACCTGCGGGCCATCCGGCCGCACCTGCCGCAGTCCCCCCCGCCGCCGCCCCGCGCCGAAGCCGCCCTCGCCCCCACCCCCGCCCCCGTTAAGAAGGAGATCGTCCCCAAGAAGGAGACCATTGTGCCTAAGAGCGAGCCAAGCGACGAAGAGGAGCCCGAACGCAGCATGACGCCGTTCCGCTGCGAGATGTGCGACCTTCGCTTCGACAAGCGCGATGACCTCTTGATGCACGTACCCGTGCACATATGA
Protein Sequence: MDAETFSLRWEEEERARTPGVAACEEVIYNTQSTSYSNIEGETIIPDTDQMAAENLMYLAQDISYTEVAELVDDQGVECVTEEVITDDWVVPGGQERVEVPLEQLTQPVPDMKDDNDIDVPLPTDQDEYTAMRPYPCDFCSRRFRKKNSLVNHMVAHQSDRPHVCNLCGVRYVRKADLMNHLKVHAFVPEHPDEMEYDDVLENHLVVKSKKKRGRRKKPIPKPPKENGEMWENMTSARTQQWSRKRTAAEPRASLPPPSPPSPPSSPSPAEPPSPPPPPADPRRPFTCKHCGIGFAREKALQSHSRVHGGESPLECGACGELCWSREALASHQRRRHPNMPAPAPPAPDYRAPDSEDEDDDDIDYRLSPSAESGGAGGGGERPIYDTVRGPELFCQHCGVAFQRADLLRRHVAAAHSYKRHDSAGSSGCEHTCGVCGETCADALQLLAHAERHAAPDHRVKSRSKSRINTTLSSSRQFPCRECGKVFGSRSSQQIHVRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRASGGPSYCCVVCGRTLHSSSELVQHLIQHCDANTALRRQPQSGPRKYKRRKKQKPELSPSSEKPEWSPPPSPPPAPPPPRARRRRAASPPPRPRMIHTAEDTRPRTKQVRNRRPPRHPADDLRAIRPHLPQSPPPPPRAEAALAPTPAPVKKEIVPKKETIVPKSEPSDEEEPERSMTPFRCEMCDLRFDKRDDLLMHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01544190;
90% Identity: iTF_01544190;
80% Identity: -