Basic Information

Insect: Yponomeuta padella
Gene Symbol: Znf296
Assembly: GCA_947311075.1
Location: OX371229.1:8267329-8287644[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 1.4e+02 3.7 0.2 2 20 156 174 155 176 0.92

2 12 0.0014 0.092 13.7 2.1 2 20 190 208 189 209 0.96

3 12 0.00014 0.0091 16.9 0.7 1 23 251 273 251 273 0.95

4 12 0.62 42 5.4 0.6 2 22 315 335 314 337 0.87

5 12 0.14 9.2 7.4 0.2 2 21 343 362 342 363 0.89

6 12 0.00042 0.028 15.3 1.6 1 23 371 394 371 394 0.97

7 12 4.8e-06 0.00032 21.4 4.2 1 23 415 437 415 437 0.99

8 12 0.00077 0.051 14.5 5.8 2 23 443 464 442 464 0.97

9 12 1.1e-07 7.7e-06 26.5 0.8 3 23 477 497 476 497 0.98

10 12 2.9e-05 0.002 19.0 3.2 1 23 503 525 503 525 0.99

11 12 2.3e-07 1.5e-05 25.6 2.8 2 23 532 553 531 553 0.96

12 12 4.8e-07 3.3e-05 24.6 1.5 1 23 559 581 559 581 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	1.4e+02	3.7	0.2	2	20	156	174	155	176	0.92
2	12	0.0014	0.092	13.7	2.1	2	20	190	208	189	209	0.96
3	12	0.00014	0.0091	16.9	0.7	1	23	251	273	251	273	0.95
4	12	0.62	42	5.4	0.6	2	22	315	335	314	337	0.87
5	12	0.14	9.2	7.4	0.2	2	21	343	362	342	363	0.89
6	12	0.00042	0.028	15.3	1.6	1	23	371	394	371	394	0.97
7	12	4.8e-06	0.00032	21.4	4.2	1	23	415	437	415	437	0.99
8	12	0.00077	0.051	14.5	5.8	2	23	443	464	442	464	0.97
9	12	1.1e-07	7.7e-06	26.5	0.8	3	23	477	497	476	497	0.98
10	12	2.9e-05	0.002	19.0	3.2	1	23	503	525	503	525	0.99
11	12	2.3e-07	1.5e-05	25.6	2.8	2	23	532	553	531	553	0.96
12	12	4.8e-07	3.3e-05	24.6	1.5	1	23	559	581	559	581	0.99

Sequence Information

Coding Sequence: ATGGCTGCGTCGCTTTCGATTCCTCGCGTGAAAATTGAAGATTTATGTAGGACTTGTCTTTCTAGAGACACTGAATTACATTCCTTATTTAGTATTAAATGTGGCTCAACAACTTTGGACCTTGTCATCGCCTCAATTACTGGAATAAAGGTACATCCAAATGATGGCCTACCAACATCTGTTTGCAAAGAATGTAAAGAGCAGGCTACAAATGCTTTTGAGTTTAAAAGAAAGTCACAGGAGTCTGATGCCACCCTTCAAAAGCTCATCAAAACAGAAAATCCCAGTTTTGATACTGGAGAAACGAAGAATCTTGAGTGCCAAACATTTGAAGTTAAGGTTGAACAAGGATTTAATGACAACACTTATTATGACATGGAAATTGATTACACGGCTCTCTCTACAATGGATGACGACTATGATGCTGAGCCCGTAAAGGAAGAAAACAATAAAGATGCAAAGTTACAGTGTGAATTTTGCTCAACCATTTTAGAATCTGAAGAGAAGTTAAAGAATCACTCGAATAATTGTTGCTTAAAGGTAGAATTCACCGGCGACACCGGTTCATATTGCCCGCTCTGTGGAGTTTGCTACGAAAATTGCAAAAACCTCACGAAGCACATGTGGGCCAGTCACGCCGATTTGATGGGACCTAAAAAGAGAGGCCGACCAAAAAGTCTGGAGACCAATAGTATACTGAATAAGTTGTCTGAAAACGGATTTCGCATAAGAACAGTTCACTTCAAAAAGTTTAACTGCACAATTTGTAGGAAACTCTTTAAAAATAAAGAAGAGTTGGTGAAACACTTGGCAGATCATAAAGACACTAAACTATTCAGCTGCTTATTGTGCAAAAAGATTTTTTTGAAAGAGACAAAGTTTAATGACCACGCTTGCACAAACCTCAAAAACGACAAGAACGAAAACGCTGTTTTGCCGCAGGTGTGCTCCCGATGTTCGCAGGTATTTGTATCAACTGCTGAACTTAGGTGTCACATTGACGACGATCACCCAGAGCAGTCTTTGAGGTGCAATAACTGTTTTAAGGTATTTGCCAGCATAAAGGGCGCCGTACGCCACAGGAAGGTATGCAAGCAAGTGGAGAAGACACACCAATGCACCACGTGCGGTGTCAAGTTCGCATACGAAATAACATTAAACAAGCACATTCTGCGATTCCACGAAGGAGAGAGTGTTTCGGTTAACTTCATAGACCCCGCAAAGAAGTTGCTTGATAAGAAATATCAATGTGACACCTGCAAAAAAGCTTTCTGCAGAAAGGACTTATTAGAAAAGCACTTCAGGGTGCACATGGAGAAAACTATTGAATGTGACATTTGCCACAAGTTGTTCCATAGAAAAGACAACATGAAGACGCACCGAAAGACTCACGAGCCCCGAACTGAAGTAAAGCTCAACACATCTCTCTGTCTGTACTGCGGTCGCAGCTTCAACAACTCGTCCAACCTCATAGTCCATATGCGTCGTCACACCGGAGAGAAGCCCTACAAGTGTGACTTCTGCGGTAAAGGCTTCCCGAGATCATCCGATCTTCAGTGCCATAGAAGATCTCACACCGGCGAGCGCCCTTGCGTTTGCAAAATTTGTGGAAAAGCGTTCTCCCGTACGAACAAACTGACTCGCCACATGCGCGTTCACACAGGGGTCAAACCCTACAAATGTACGTACTGCGAAAAGGCCTTCTCTCAGAGCAACGACTTGACGCTGCACGTCCGTCGGCACACCGGCGATAAGCCTTACATCTGCGAGGTGTGCGGCGACCGGTTCATCCAGGTCAGGACTGAGAAGGTTAAGGAAAGTTCCATCACCAAAAAAAGAGCGCGCAAGGTGCGCGGCAGCTATGCGCGGCATTCGCGGGACCCCTTAGTCCTCGTCGTGCCACCAACTTGTTCCACCAGTGGCACGATAAGGAATTGTCATTCCTCGTCGTACCACTGA
Protein Sequence: MAASLSIPRVKIEDLCRTCLSRDTELHSLFSIKCGSTTLDLVIASITGIKVHPNDGLPTSVCKECKEQATNAFEFKRKSQESDATLQKLIKTENPSFDTGETKNLECQTFEVKVEQGFNDNTYYDMEIDYTALSTMDDDYDAEPVKEENNKDAKLQCEFCSTILESEEKLKNHSNNCCLKVEFTGDTGSYCPLCGVCYENCKNLTKHMWASHADLMGPKKRGRPKSLETNSILNKLSENGFRIRTVHFKKFNCTICRKLFKNKEELVKHLADHKDTKLFSCLLCKKIFLKETKFNDHACTNLKNDKNENAVLPQVCSRCSQVFVSTAELRCHIDDDHPEQSLRCNNCFKVFASIKGAVRHRKVCKQVEKTHQCTTCGVKFAYEITLNKHILRFHEGESVSVNFIDPAKKLLDKKYQCDTCKKAFCRKDLLEKHFRVHMEKTIECDICHKLFHRKDNMKTHRKTHEPRTEVKLNTSLCLYCGRSFNNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGERPCVCKICGKAFSRTNKLTRHMRVHTGVKPYKCTYCEKAFSQSNDLTLHVRRHTGDKPYICEVCGDRFIQVRTEKVKESSITKKRARKVRGSYARHSRDPLVLVVPPTCSTSGTIRNCHSSSYH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01544167; iTF_01543183; iTF_01545947; iTF_01546860;
90% Identity: iTF_01544167;
80% Identity: -