Ypad012330.1
Basic Information
- Insect
- Yponomeuta padella
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_947311075.1
- Location
- OX371250.1:4204226-4205629[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-15 7.6e-13 48.4 0.0 1 39 15 54 15 57 0.95 2 2 1.1e-18 7.5e-16 58.0 0.0 1 43 227 270 227 272 0.95
Sequence Information
- Coding Sequence
- ATGCTGGAATGTTCAAGCAACAGCGCAGCCCGGCGGGCGTACACCGACGATGAACTGCAGAGCGCTCTGCGGGACATCCAGTCAGGCAAGCTGGGCACGCGCAGAGCCGCCGTGGTCTACGGGATCCCCCGCTCCACACTACGGAATAAAGTTTACAAGCTCGCCTCAGAACCTGGCCACGATTCTGACCCCGACAGCGACCCCGAAAGAGGCGACAGGGACTCTCCACCCTCTGTCATCCTCAAGATCCCGACATTCCCGATCCCTGACGAGAAATCCCCTTCGCCTGCCACTCCGGTGACGACCCCAATCACTCCCATAACACCAAATTTCCAACCACCGTCGAAACCGCCTATGAACCCGCCTTCGCAACTTCTGTTACCCCCCTCGGTGTACGCTGATCCGCCTTCAGCCAAGCATCTCTTTACGTCGCTCAGTGACGTCATAGCTAAGAGCATAAGCCAGAAGTTTCAGCAGCCTCTAGACCGGCAACATGCGGAGATGTACGGCATGCGGCCGCAGGACCGGCACGTGTCCGTCATTAAAACTCCGCCGGAGAACCCTAGGAACTACTCAGTCCCGAGCAACTCGAGAGGCAACGCGGCGAACAACAACGGGCAGCAGCAACAACCAGGAGGTAAGGGCACGAGGCCGAAGAGAGGCAAATATAGGAACTATGATAGAGACAGCCTCGTTGAAGCCGTGAAGGCGGTTCAGAGAGGCGAAATGTCAGTCCACAGAGCCGGCTCGTACTACGGCGTACCTCACTCCACCCTCGAGTACAAAGTGAAGGAGCGGCATCTCATGCGACCGAGAAAGCGCGAGCCTAAGCCGCCCCAAGACATGACGAAACCTCAGCCGCCAAAACCTCCACAGCCAAAGCCGCCGACCAAGCCGTTCAGCAACGGAATGAACGGGCCAGAGAACGCTGGTTACCCTTCCGGTTACTTTTGGCCCCCGCCCGGGTTTGCCCCGCCGCCGCCCACGCCTGAGCTGTACGCATCCCACATGATGCGTCGGTTGCGCGAAGAGGCGCCGCCTCCAGCGAACGGGTCCTTCCTAGAAGGTATCATCAGGTCGAGCCTCGAGAGGCCGGGAGCGGCGCTCCTGCAGCGGCTGACGGCGGAGCCGCGGCCGCCGATGACGCCGACCACGGACGCACCGAGCCTCCTCCGGCGGCTGGCGGGGGAGCCAAATAACGAGGATTCTCCCCCTGCACGTCGGCCCCGCATAGATAGCTCAGATAGACAACTGGCGGCCGAGATGAGGGAAGCAGTGCAGCGGCTAAGAGCCGACAAGATGAGGCCCAGGAACGGCACGCCGACGCCGCCGGCCGCCGTCACCCCTGGCGCGGCCCTGTCCCCCCCGCCGATACCCCCGGCCGCACCCCCTGACCGCCCCTAG
- Protein Sequence
- MLECSSNSAARRAYTDDELQSALRDIQSGKLGTRRAAVVYGIPRSTLRNKVYKLASEPGHDSDPDSDPERGDRDSPPSVILKIPTFPIPDEKSPSPATPVTTPITPITPNFQPPSKPPMNPPSQLLLPPSVYADPPSAKHLFTSLSDVIAKSISQKFQQPLDRQHAEMYGMRPQDRHVSVIKTPPENPRNYSVPSNSRGNAANNNGQQQQPGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDMTKPQPPKPPQPKPPTKPFSNGMNGPENAGYPSGYFWPPPGFAPPPPTPELYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRPPMTPTTDAPSLLRRLAGEPNNEDSPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPAAVTPGAALSPPPIPPAAPPDRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01133643;
- 90% Identity
- iTF_01543812;
- 80% Identity
- -