Yevo024630.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- nfxl1
- Assembly
- GCA_963969515.1
- Location
- OZ018364.1:1951879-1953363[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.3 5.2e+03 -1.5 0.7 5 10 3 8 3 13 0.89 2 15 9.2e-07 0.016 16.1 19.7 3 18 16 31 8 32 0.84 3 15 0.62 1.1e+04 -2.5 1.2 5 10 55 60 55 60 0.92 4 15 3.8e-06 0.064 14.2 19.0 1 18 66 83 66 84 0.97 5 15 4.4e-10 7.6e-06 26.7 14.4 1 19 93 111 93 111 0.99 6 15 2 3.4e+04 -4.8 2.6 9 11 139 141 129 144 0.53 7 15 0.00019 3.2 8.7 6.2 10 19 160 169 157 169 0.93 8 15 0.00029 5 8.1 7.5 1 12 178 188 178 188 0.96 9 15 0.18 3.1e+03 -0.8 3.5 14 18 217 221 217 222 0.87 10 15 1.1e-05 0.19 12.7 3.4 1 11 258 268 258 269 0.97 11 15 2 3.4e+04 -4.1 3.3 15 18 283 286 282 290 0.72 12 15 0.00099 17 6.4 14.1 4 18 300 315 298 316 0.82 13 15 0.28 4.7e+03 -1.4 1.1 8 13 321 326 320 327 0.78 14 15 5.3e-08 0.00091 20.1 12.6 1 18 357 375 357 376 0.91 15 15 0.9 1.5e+04 -3.0 0.7 6 10 405 409 404 409 0.87
Sequence Information
- Coding Sequence
- ATGGAGACATGTATGGAAACTTGTGGTAGACAGCACGAACTATGTAAGCATAACTGTCCAGAAAAATGCCACAAAGGCCCTTGTCCACCTTGCCTGGTTTTAGTTGAGAAAAAGTGTCAGTGCTCTATGCATACCAAATCCCTGCCCTGCAGCCGTGAGTTCCGGTGCGAGGCCAAGTGCCGCGGCATCAGATCATGCGGCAAGCATGGATGCAGTAGGAAATGTTGCAATGGTAACTGCCCACCATGTGAGAAACTTTGCGACAAACCTTTACAGTGTGGCAGGCATAAGTGCACAACTGTCTGCCACCGCGGCCCTTGCTACCCTTGCCCAAGAGAGGCTCATGTCACCTGCCGTTGCAAAGAGACCTCTGTGACAGTTCCGTGTGGCAGAGAAAGGCATACAAAACCACCGAGGTGCCACCTACCCTGCAAGATTAAATACAAATGCGGTCATGCAGACGAAAATGTACACCAATGCCATTTCGGCAACTGTCCGCCTTGCAAGGCTATTTGCGACAAGACGCACGTCTGTGGCCACCGTTGCCCCGCCACGTGCCACGAGAACGTCGCCGTGACGTTCAAACAGGTAGAGAAACCTGCTACGCCTTGGGAGGTCCAGCCCCCAAAAACTAAGATCATGTCGCTAGACTGCCCGCCGTGCGAAACTCCCATCCCTGTCACTTGTTTCGGAGAACATGAGACCGTCAACCAGGCTTGCTACGTCGCTGCGCGTTTTGCTTGCGGCAGAGAGTGTGGCCGTCCGCTGCCTTGCGGCAACCACGTCTGCGCCGCGCTATGCCATCTCTTTGAGCCCCTTACTGAGTTGCCTAGCATCTCAAGCTCCTGCGCACCCTGCGAGGAGGAATGCCTCGTGCCACGGCCGGCGAAATGCGTTCATAAGTGTCCAAAGAAGGCCTGTCATCCAGGCGAATGTCCCCGCTGCGACATTATCAAAAAAAGTCCTTGCCATTGCGGCCTTAACGAACTCTACCTGCGCTGTTACGAACTCACTTCAGCGACTGACGAAATGCTTTCCTGCAAACTCCAGTGCCCGAAGAATATGCTGTGCGGTCACCGTTGCAAGGAAGTCTGCCATCCGGGTAGCTGCCCAATTCAAGTTTGCACAAAGAAAGCCAAGGCGTACTGCCCCTGCGggaatataaagaaagaaatacaatgCAGCCTCATTAGAGAGGGCAAAAAGATTGCTTGTGATGAAACATGCGATGCTAAGAAGCTAGCCGctcaattagaaaaagaaaaagaggaGAAAAAACGCAAGGAGcacgaagaagaaaaaaacaaaagagagtTAGCGGAATATGAGTGGAAGATGAGTGGAAAGAAACGCAAACACAGGGAAAGGAGGGTTGTTGAGAATAAAGATGAAAGGGGTTTCTTGAAAAAGTTCTGGATTCCTATCACTGCTCTGTTAACAGTTGTTCTGGGTGGTATTTATTATGTTCTTATGGTGGAGTATTAA
- Protein Sequence
- METCMETCGRQHELCKHNCPEKCHKGPCPPCLVLVEKKCQCSMHTKSLPCSREFRCEAKCRGIRSCGKHGCSRKCCNGNCPPCEKLCDKPLQCGRHKCTTVCHRGPCYPCPREAHVTCRCKETSVTVPCGRERHTKPPRCHLPCKIKYKCGHADENVHQCHFGNCPPCKAICDKTHVCGHRCPATCHENVAVTFKQVEKPATPWEVQPPKTKIMSLDCPPCETPIPVTCFGEHETVNQACYVAARFACGRECGRPLPCGNHVCAALCHLFEPLTELPSISSSCAPCEEECLVPRPAKCVHKCPKKACHPGECPRCDIIKKSPCHCGLNELYLRCYELTSATDEMLSCKLQCPKNMLCGHRCKEVCHPGSCPIQVCTKKAKAYCPCGNIKKEIQCSLIREGKKIACDETCDAKKLAAQLEKEKEEKKRKEHEEEKNKRELAEYEWKMSGKKRKHRERRVVENKDERGFLKKFWIPITALLTVVLGGIYYVLMVEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -