Basic Information

Gene Symbol
gata6-a
Assembly
GCA_963969515.1
Location
OZ018347.1:22031917-22037694[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-17 1.4e-13 51.1 3.3 1 35 420 453 420 454 0.97
2 2 8.9e-18 2.8e-14 53.3 7.5 1 35 481 514 481 515 0.97

Sequence Information

Coding Sequence
ATGGAGAACGGTGAGCAGAACGCTGCTGCCGAGCACACGGAAACGCAGCAGGagcagcatcatcatcatcagcaggagcagcatcatcatcatcagcagcagcAGCATGAGGAGGCAGCGCAGCAGGCCGGCGAGGCGCTGCAGCTCGTGAAGACGGAGGAGCAGGAGGCGAGCGGCGGCGGGGAGGAGGGGCAGCCGCAGTCCGTCATCACGCTGCGGCGCGGCGTGCGCACCATCACGGCGGCCGGACACATCACGGAGGAGCCGGCCGACGACGTCAAGGACGAGCCGCCCGAGCCGCCGCGCGAGCACGAGCAGCACGAGCACCACGAGCACCACGAGCACGAGCAATACGGCAAGCTGGAGGCAGAGCGCGCGCATTACGATGACGAGCGACTGCGGCTGGCCGAGGCCGAGGCGGCGCGCTACCTCGCCTTCAAGCCCGAGTACCGCGCCtcgcccgcgccgcgcgccgcgccgccgcagtactcgcgcgcgccgcccgctcccgccgcgccgccgcgcccgccctACCGCCTGCGCTACGACGGCGAGCACGAGCAGATGCACGCGTACggtgcgggcggcggcggcggtggagGGGGCGAGGGCGAGCGCGCGCACTACGTGCTGAGTGAGCAGGCGCCGCTGGAGCTGCTGCCGCCGCAGCTGGCGGGCCAGTACCAGCCGGTCAAGTACGAGGCGCGcgagggcggcggcggcgggggcggggagGCGCGGCCCGGCACGTACGCCGCGCTGCAGCCGGTGAGCTCGCTGCACGGTGGCTACGGCTACGCGGGGGGCAGCCCGGTGTACGCAGGTGCGGGtgggggcggcgcgggcgcggggggcggctACTACGGCGTGGGCGCGGGCAAGGAGCTGCTGGCGCTGTACGCGGGCCGGGAGGAGTCGCCGCCGGGGCAACTGCTGTACCGCGACCCGCCACTGTCCAGCTCGTCGCTGGCGGCCCGGCAGCACGTCGTATACGGCTCCGTCGTGCAACAGCCTGTCTACGAGCAAGCACCCAGTCCCAACTCACAACAGGTGACGCTGTACAGCGGCGGCGGCACGGTGCAGTACCTGGCGGGCGgcagcggcgcgggcggcgcgggagGGGAGTACGTGGGCGTGGCGGGCTACGAGGGCGCGCTGCTGGTGGAACCCTACCAGCAGGCCTGGCCCGCCGCCGGACTCGTGCCCATGGACGACTCCTTTGACCCAGCGCTGGCGGGCATGCCGGACGTGAAGGAGTGCGTGAACTGCGCGGCGGCCAACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACCGCATCAACGGCGTCAACCGCCCGCCGCTCAAGGGGCAGAAGGCCAAGCCGCAGCAGGCGCTGCCGACGAACGGCAACCGGCGCGTGGGCGTGACGTGCGCCAACTGCCGCACCAGCAACACGACGCTGTGGCGCCGCAACAACAACGGCGAGCCCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACGTTAACCGGCCACTGAGCATGAAGAAGGACGGTATCCAGACCCGCAAGCGGAAGCCCAAGAGCATgggcggcgcgggggcgggcgctgggggcggcgcgggcgcgggcgcgggcgggggcgggcgcgggctGGCGGGTACGTACGCGCATGCGCGCCTGCCGCCGCTGTACGCCGCCGTGGCCGCGCCGCGCGCGCTGCACGCGTGA
Protein Sequence
MENGEQNAAAEHTETQQEQHHHHQQEQHHHHQQQQHEEAAQQAGEALQLVKTEEQEASGGGEEGQPQSVITLRRGVRTITAAGHITEEPADDVKDEPPEPPREHEQHEHHEHHEHEQYGKLEAERAHYDDERLRLAEAEAARYLAFKPEYRASPAPRAAPPQYSRAPPAPAAPPRPPYRLRYDGEHEQMHAYGAGGGGGGGGEGERAHYVLSEQAPLELLPPQLAGQYQPVKYEAREGGGGGGGEARPGTYAALQPVSSLHGGYGYAGGSPVYAGAGGGGAGAGGGYYGVGAGKELLALYAGREESPPGQLLYRDPPLSSSSLAARQHVVYGSVVQQPVYEQAPSPNSQQVTLYSGGGTVQYLAGGSGAGGAGGEYVGVAGYEGALLVEPYQQAWPAAGLVPMDDSFDPALAGMPDVKECVNCAAANTPLWRRDGTGHYLCNACGLYNRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGAGAGAGGGAGAGAGGGGRGLAGTYAHARLPPLYAAVAAPRALHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01543516;
90% Identity
iTF_01543516;
80% Identity
-