Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018347.1:13424989-13427522[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.46 39 5.9 2.1 3 23 171 192 169 192 0.91

2 7 5.1e-05 0.0042 18.4 2.0 1 23 205 228 205 228 0.97

3 7 6.8e-05 0.0057 17.9 5.8 2 23 267 288 266 288 0.97

4 7 0.0018 0.15 13.5 5.4 1 23 294 316 294 316 0.97

5 7 3.3e-05 0.0027 19.0 4.1 1 23 322 344 322 344 0.98

6 7 1.5e-05 0.0013 20.0 3.4 1 23 350 372 350 372 0.98

7 7 0.12 9.6 7.8 4.4 1 21 378 398 378 399 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.46	39	5.9	2.1	3	23	171	192	169	192	0.91
2	7	5.1e-05	0.0042	18.4	2.0	1	23	205	228	205	228	0.97
3	7	6.8e-05	0.0057	17.9	5.8	2	23	267	288	266	288	0.97
4	7	0.0018	0.15	13.5	5.4	1	23	294	316	294	316	0.97
5	7	3.3e-05	0.0027	19.0	4.1	1	23	322	344	322	344	0.98
6	7	1.5e-05	0.0013	20.0	3.4	1	23	350	372	350	372	0.98
7	7	0.12	9.6	7.8	4.4	1	21	378	398	378	399	0.93

Sequence Information

Coding Sequence: ATGAGTGCACATGCAGCGTCACTCAAGTGTCCTATTTGTTTCCATAGTGGCGTTTTTGATTCCGCCGAAACACTTAGAAACAGATTGATATTTGTTTCCACAAACAAAATTCTGTGTCCAGTTTGCCAAGATGAAGTCATTGGACTAGATAAACTGACCATACACTTATTCAGTCATGTTAAAATTATGGTTACGGAAACTtgtactaataaaaataattcagatGATGTGAATCCTAAATCTATACAAGAAAAATCAAGTTTGAAAGCAAATCCTTCCTTAAGAAAGAAATCAAAAGCATCCGTGTCTAAAAATAAAACTCCACCCGCAGTGGCCAGTGAACCTGTTAAATTCGTCAAGATTTATCCAAAACTACCTGTGGTATCACTCAATAAAGTGTCTACTATTGATATATCGCAAGTACCCATCAAAGAAAATGTTACCAACAAAGTATTCGTATCAACAATCGAAACGGAGGCACCACAGTcgcaaacaaaattaaatacgaTATGTAACATCTGTGGCCTACAGTTTGTTGACTGCAATATTTTGAAGATGCACAGATGTCTGATACATAACATTGAAGAAAACTCTGCGCAGAATTTTACAAGATACAACTGTCATTTGTGTACCAAGAACTTCAAAATGAGGGGATCCCTGATGGTGCACCTACGCATGGCTCACTACGGCTTTTCTGCCGGAAATTGCTCGGCCAGTTCTAATAATACTTTGAACATCGCAGACGAGGAATCTAACTCCAATGACAAACCTCTGTTAAAAAATGATACTAAACAATGGCAATGCGATGTGTGTAGAAAATGTTTCACGACGAAGTATTTCTTGAAAAAACATAAGCGTCTTCATACAGGTGAAACTCCATACTCCTGTGCACAGTGCAACAAAACCTTTACGTTCCAGCAGTCGTATCATAAACATCTTTTGTATCACAATGATGAAAAGCCTCACACCTGCACCTATTGTGGTCGAGCTTTCAAGGAAATTTCAACACTTCACAACCACCAGCGGATTCATACAGGAGAGAAACCGTTTTCTTGTGAAACATGTGgaAAATGTTTCCGACAAAGAGTCTCTTATTTAGTGCACAGACGTATTCATACAGGGGTTATGCCCTACAAATGTACAGCATGTGAGAAAAGTTTTCGTtacaagGTTTCTCAGAGAACTCATAAATGTCGTGCACAGCCCCCTGGTACAGTCATACGACAAAGTGGTGATTTGCTCGAAAAACTAAAAATCAAACattcaaattctgacattaaaTCATTAGAAGAACCACACCAACATAAGATAGAAACGAGTGCTGTTTTTATAGAAGTCTCCGAAGCGAACGCGGAATTAGTGAGAAGCAGTGCCAAGTTATCTTTTGAAGATACCGAAACAGAAAACTTTTCTTTGATATCAGATCAGTttgaaactgaaattaaaaactCAAAAGACTGTGCAAAAGCAAATACAGAGGAAGAACAGATTATTGAAAACAACGAAAGTCTGAACGAATTACTAAACTCCAATTTTGAAGAATTAATAGATTCCATACCACTGGAAGAGAAAAATATGCCATCACCATCAGATATATTGAAAAACTTATGTCTGTCTCAAGAAGACGATAGTTCAGATTTAAAACAACAAGAAAATGGGTTAGAGAATCATGAAATATTTGAAGAATTTATGTGA
Protein Sequence: MSAHAASLKCPICFHSGVFDSAETLRNRLIFVSTNKILCPVCQDEVIGLDKLTIHLFSHVKIMVTETCTNKNNSDDVNPKSIQEKSSLKANPSLRKKSKASVSKNKTPPAVASEPVKFVKIYPKLPVVSLNKVSTIDISQVPIKENVTNKVFVSTIETEAPQSQTKLNTICNICGLQFVDCNILKMHRCLIHNIEENSAQNFTRYNCHLCTKNFKMRGSLMVHLRMAHYGFSAGNCSASSNNTLNIADEESNSNDKPLLKNDTKQWQCDVCRKCFTTKYFLKKHKRLHTGETPYSCAQCNKTFTFQQSYHKHLLYHNDEKPHTCTYCGRAFKEISTLHNHQRIHTGEKPFSCETCGKCFRQRVSYLVHRRIHTGVMPYKCTACEKSFRYKVSQRTHKCRAQPPGTVIRQSGDLLEKLKIKHSNSDIKSLEEPHQHKIETSAVFIEVSEANAELVRSSAKLSFEDTETENFSLISDQFETEIKNSKDCAKANTEEEQIIENNESLNELLNSNFEELIDSIPLEEKNMPSPSDILKNLCLSQEDDSSDLKQQENGLENHEIFEEFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -