Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018370.1:1733629-1735973[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.019 1.5 10.3 0.1 2 23 26 48 25 48 0.93

2 16 2.9 2.4e+02 3.4 2.9 2 23 116 137 115 137 0.94

3 16 0.029 2.4 9.7 1.3 2 23 142 164 141 164 0.92

4 16 0.04 3.3 9.2 0.8 1 21 168 188 168 189 0.96

5 16 1.8 1.5e+02 4.1 0.2 3 23 198 219 196 219 0.92

6 16 0.13 11 7.6 1.1 1 21 226 246 226 249 0.81

7 16 0.00024 0.02 16.2 1.5 2 23 254 275 253 275 0.96

8 16 0.00011 0.0092 17.3 2.4 1 23 281 303 281 303 0.98

9 16 0.0019 0.16 13.4 0.6 1 20 430 449 430 452 0.91

10 16 1.4e-05 0.0012 20.1 3.2 1 23 456 479 456 479 0.95

11 16 0.049 4 9.0 0.4 3 21 485 503 484 504 0.94

12 16 0.11 9.1 7.8 0.3 1 23 511 534 511 534 0.84

13 16 0.2 16 7.1 2.4 1 23 541 564 541 564 0.85

14 16 0.0048 0.4 12.1 0.9 2 23 569 590 568 590 0.93

15 16 0.0033 0.28 12.6 1.7 1 23 596 618 596 618 0.98

16 16 0.2 16 7.1 1.1 3 23 626 646 626 647 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.019	1.5	10.3	0.1	2	23	26	48	25	48	0.93
2	16	2.9	2.4e+02	3.4	2.9	2	23	116	137	115	137	0.94
3	16	0.029	2.4	9.7	1.3	2	23	142	164	141	164	0.92
4	16	0.04	3.3	9.2	0.8	1	21	168	188	168	189	0.96
5	16	1.8	1.5e+02	4.1	0.2	3	23	198	219	196	219	0.92
6	16	0.13	11	7.6	1.1	1	21	226	246	226	249	0.81
7	16	0.00024	0.02	16.2	1.5	2	23	254	275	253	275	0.96
8	16	0.00011	0.0092	17.3	2.4	1	23	281	303	281	303	0.98
9	16	0.0019	0.16	13.4	0.6	1	20	430	449	430	452	0.91
10	16	1.4e-05	0.0012	20.1	3.2	1	23	456	479	456	479	0.95
11	16	0.049	4	9.0	0.4	3	21	485	503	484	504	0.94
12	16	0.11	9.1	7.8	0.3	1	23	511	534	511	534	0.84
13	16	0.2	16	7.1	2.4	1	23	541	564	541	564	0.85
14	16	0.0048	0.4	12.1	0.9	2	23	569	590	568	590	0.93
15	16	0.0033	0.28	12.6	1.7	1	23	596	618	596	618	0.98
16	16	0.2	16	7.1	1.1	3	23	626	646	626	647	0.96

Sequence Information

Coding Sequence: ATGCGGGACAGTGCGAGATTGATATTGAAACACTCCACCGCGTATCCGTTCAAGGTCACCAAGAATGAGAAAATCCAGTGTTATTTCTGTCCCAACGAGTTTGCAGACCCTGTCGAGTTCCGAAAACACATCGATCAGTTACACTGTGGTGTCGATAGATCTAGAGCGTTTCACGATACTATGTCTACACGTATAGACATCACTAACCTTATTTGTAGGCTATGCGTGACGTTGCATGATACGCTGGGATCCCTAGCGGAGCATCTTCGGGCACAGCACGATCTTGACGTTGATTTGACTATTAAATCGAATTTACTGCCCTTAAAACTGAAGAAGGACGCGGTGGTCTGTGGAACTTGTGGCAGCACCTTTTCCTGCCACAAGGAGATGTCGAAGCATTTATATGTACATTCCTTAGGACTAATATGTCACATTTGCGGCAAGAAAGTACTAACTAAAAGAGGTTTGCATGCTCATATGGCGGAAAAACATTCTTCCACGTTTTCATGTAGGCAGTGTAGGCGTCAGTTCGTCACTAAACAGGAGAGGATCCAGCACATACGTGAGAACAAGTGCTGCTGGCCTTACGGTTGTGCGACGTGCAAAGAACGGTTTCAATTTTGGGAGGCAAGACAATCACACTTGGAGCAGGTCCACGGCGCAGACAAAATCACATTTCCGTGCAAAGAATGCGGTGTTGTCTTCGAAAAGAGAATACAACTATACTTCCATTTCAAACAGACCCATACGCAGGATTTAAAGTGTCATGTTTGCGGATTAACCTTCTATCAAAAGCGCGATTTGCTTGAGCATGGCTATACACACACTGGCGAGAGGCCGTATAAGTGCAAGCATTGCGACGCCTCATTTGCAAAGGCAAAGAACTTTGCAAACCATTCCAAAATACACGACGACAGCTTACAAGCGGTTGGATTGGACAACGCATGGAGAAGTTCGAAATTGCTATTAAAACACTCCACTGCATGTCCGTTCACGCTGATCGGCACTAAGGATTTCAAGTGCTATTTCTGTGCCAGCCTCTTTGAAGATCCGGTTACGTTCAGAATGCACGTCAACTGTCAACACAGGAGCCTCGATAGGTCAATTGTGCTAAAAAACAAACGCATGATTATACGCGTTGATATCACTCACCTTGCGTGCAAGCTGTGTATGACTCCGCACGATACATTGCCCTCCCTCGCCGACCATCTGAAAGTACAACATCAGCTCGACGTCGACGCTAATGCTAACTTCAGGCTAGTTCCTTTAAGATTAGAGTTAGACCGCTTCGTTTGTGTGACCTGCGGGAAAAAGTTCACCGGTTACAAAGAACTGTCAAAACACTCGGGTGCACATTTCCTTAGATTCATTTGCCACATTTGTGGTAAAAATTTCCAAACCTGTAGCGGTTTGAAGAGGCATTTAATCATTAATCATTCGGCCGGCCCCATGTGCAGAGTTTGCAGACGTACATTTCCGACGAAGGAGGCTAGGAAACAACACGTACGCGAGAGCAAATCGTGCATGACTTTCCTCTGTAAGGAATGCAATGAGAGGTTTCCTTCATGGGAAGTAAAAGATAAGCATATGGTCGAGAAGCACGGGCAGGCTAAACTAACGTACCCATGTAAAGAGTGTGGGTTGGTATTCGATAAAAGATGTGCCCGTTACCAACACTTCAAAGCGACTCACACTCAGGATTTGAAATGCGAACTTTGCGATAAGACGTTTTCAATGCGACAACGGCTGATTGAACACGGCTTCAAGCACACTGGCGAGAGACCCTACAAATGCAACATTTGCGAAGCGTCCTTCGCTACGCTTAAAAACCACAGGCAACACGTGAAAATACATGACGACAGTAAGAAATTGGGCTGCCCGGTGTGCGCCAAACTGTTCGTGGATAGGACGAAGATAAAGTTGCACGTTAATAAGCATCATCCCGACGTGTTTGATCAATGGGCTCTCACCATGAAGTTTAGGACTAATTAG
Protein Sequence: MRDSARLILKHSTAYPFKVTKNEKIQCYFCPNEFADPVEFRKHIDQLHCGVDRSRAFHDTMSTRIDITNLICRLCVTLHDTLGSLAEHLRAQHDLDVDLTIKSNLLPLKLKKDAVVCGTCGSTFSCHKEMSKHLYVHSLGLICHICGKKVLTKRGLHAHMAEKHSSTFSCRQCRRQFVTKQERIQHIRENKCCWPYGCATCKERFQFWEARQSHLEQVHGADKITFPCKECGVVFEKRIQLYFHFKQTHTQDLKCHVCGLTFYQKRDLLEHGYTHTGERPYKCKHCDASFAKAKNFANHSKIHDDSLQAVGLDNAWRSSKLLLKHSTACPFTLIGTKDFKCYFCASLFEDPVTFRMHVNCQHRSLDRSIVLKNKRMIIRVDITHLACKLCMTPHDTLPSLADHLKVQHQLDVDANANFRLVPLRLELDRFVCVTCGKKFTGYKELSKHSGAHFLRFICHICGKNFQTCSGLKRHLIINHSAGPMCRVCRRTFPTKEARKQHVRESKSCMTFLCKECNERFPSWEVKDKHMVEKHGQAKLTYPCKECGLVFDKRCARYQHFKATHTQDLKCELCDKTFSMRQRLIEHGFKHTGERPYKCNICEASFATLKNHRQHVKIHDDSKKLGCPVCAKLFVDRTKIKLHVNKHHPDVFDQWALTMKFRTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -