Yevo030491.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- Znf574
- Assembly
- GCA_963969515.1
- Location
- OZ018372.1:3389708-3416649[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.011 0.9 11.0 0.9 1 23 218 240 218 240 0.98 2 10 0.033 2.7 9.5 2.4 1 23 247 269 247 269 0.94 3 10 1 83 4.8 4.1 1 23 302 326 302 326 0.89 4 10 1.6e-06 0.00013 23.1 4.2 2 23 331 352 331 352 0.98 5 10 3.4e-06 0.00028 22.0 2.1 2 23 359 380 358 380 0.97 6 10 0.16 14 7.3 0.7 3 21 392 410 391 415 0.92 7 10 2.6e-05 0.0022 19.2 1.0 1 23 423 446 423 446 0.97 8 10 0.082 6.8 8.3 3.4 1 23 452 475 452 475 0.95 9 10 6e-06 0.0005 21.3 1.4 3 23 487 507 485 507 0.97 10 10 3.3e-06 0.00028 22.1 1.3 1 23 513 536 513 536 0.95
Sequence Information
- Coding Sequence
- ATGGAAGAAGATATAGAAAGGAGTGGGAGAGCGAAGCAATATTTAAAGTTGAACAGAGGTGCCAGAGTATGCTGGGAGTGTAAAGCTCTATTTCTGAGGTTCGACACATTCCGGCGGCAAGTGAGCCGAGCACAGACAACGCTCAAGTCGCATTCTAAGAAACCAAGACACATCCCATCCCTGTCCGCCCTCACCGTTTCCCACAAGGATTCCTTCGACCACATCTACCTGGATGAAGACGTCGTGAAGCCAGAATCGCTGTCCTTGGAACTGAAGGAGGAATTTATCGACGATCTGAAGCCGGACCCTGGAGCGGTTGGGACAGACATACCAGTGGAACTGGTGTTCGCCACACCGGGCACCAGCCTTAACGTCAGCTTTGAGGATCCTCTTGATAAGTCACTTCTTGGAGAGGTGCGAACCTCAACCGGCATCGAACCGGGGATCCCGCAATCAAACGGCGAACAAGAGAAAGACTTGGAGAATTCGGACAGCGATGTGCAAAACGACAGCACCGATTGGCTGGAACCGACCGCGACCAAGGAGCCGAGAAGGAGATACGCTAGTCATCTGATCAAGAATGTCAGCGAGGAGGAGATGCTTCAGGCTAGGTACTTAGAAATGAACGCGACAGGATATGTGAACGCTCAATACAAGTGCGAGAGCTGCGTTATCAAGTTTGTACTAgaagacaaatacaaaaaacacatGGCCAAACATAAACCGGAGGCCGGCAACTTTATGTGCCAGTTATGCCGTCAGCGCTTCAAGCAAGAGTCTACGGCGAAGAAACATTTCCTTGACCACTACAGGTTCTACCAGTGCCGCGCCTGCGAGTTTACCCACCACCGGCTGGGCACGGTGCAGAGACATTTCGAGAACGAACACGAGGCGGTGCGCGTCTTTCAGTGTAAGCTTTGCGACGAGGAGTTCCTCACAAGTTGCCGAAGGAAGCACCACATGCAGACTGCGGCTCACAAAGCAGCGCCCCAGTGCCCGCACTGCTCCAAAATCTTCTCTAATCCGTGCAACCTCAAGGTGCATCTTCGGACACACGGGGTGCGGCCAAAGCTGGAATGCAATGTATGCCACAAGCAATATACGGGCCAGAAGAACCTGAGAGCGCACATGCGCAGTCACGAAGCGCGCGCGCAGACCGAAGAGACTGCTTACTGCGCGGAGTGCGACGTGCGCTTTAAAAACCGGCTGATGTACCTATCACACCTGAAGTACTCCAGCCGGCATCTCACCGAGGAGAGCTACAGATACCAATGCAACGAGTGCGGACGCAAGTACATTATGAAACACAGCCTCGAGGAGCATATCGAACGCGAGCACTTGAAGATACTGCAGTACGCGTGCGAGCAGTGCGAACAGAAGTTCGTGAGCCGTCGTCAGAAAAGGCATCACGTCCACGTGGTGCACAAGATGGCCGCCCCGCCGGATAGGCGAGTCAACTGCACCATATGCGGGAAACAGTTCGCGACCTCCACTACCCTTCGGATTCATCATCGCATACACACAGGAGAGAGACCGTACGCCTGTTCCTACTGTCCGATGCGGTTCACGCAGAAGAGTACGCTCAGAACACACATAAAGGGAAAACATAAGGAGGCCGGCCTGCTGCCTTGA
- Protein Sequence
- MEEDIERSGRAKQYLKLNRGARVCWECKALFLRFDTFRRQVSRAQTTLKSHSKKPRHIPSLSALTVSHKDSFDHIYLDEDVVKPESLSLELKEEFIDDLKPDPGAVGTDIPVELVFATPGTSLNVSFEDPLDKSLLGEVRTSTGIEPGIPQSNGEQEKDLENSDSDVQNDSTDWLEPTATKEPRRRYASHLIKNVSEEEMLQARYLEMNATGYVNAQYKCESCVIKFVLEDKYKKHMAKHKPEAGNFMCQLCRQRFKQESTAKKHFLDHYRFYQCRACEFTHHRLGTVQRHFENEHEAVRVFQCKLCDEEFLTSCRRKHHMQTAAHKAAPQCPHCSKIFSNPCNLKVHLRTHGVRPKLECNVCHKQYTGQKNLRAHMRSHEARAQTEETAYCAECDVRFKNRLMYLSHLKYSSRHLTEESYRYQCNECGRKYIMKHSLEEHIEREHLKILQYACEQCEQKFVSRRQKRHHVHVVHKMAAPPDRRVNCTICGKQFATSTTLRIHHRIHTGERPYACSYCPMRFTQKSTLRTHIKGKHKEAGLLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545218;
- 90% Identity
- iTF_01546954;
- 80% Identity
- -