Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018372.1:3946310-3964360[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00085 0.071 14.5 0.8 1 23 247 269 247 269 0.93

2 10 6.9e-05 0.0058 17.9 0.2 2 23 277 298 276 298 0.96

3 10 0.00026 0.021 16.1 0.3 3 23 332 353 331 353 0.97

4 10 0.12 9.7 7.8 6.5 1 23 357 380 357 380 0.98

5 10 5.1e-05 0.0042 18.3 3.4 2 23 387 409 386 409 0.97

6 10 0.11 9.1 7.9 0.3 3 21 422 440 421 445 0.93

7 10 0.00018 0.015 16.6 3.3 1 23 453 476 453 476 0.95

8 10 0.00088 0.073 14.4 2.0 1 23 482 505 482 505 0.97

9 10 6.9e-05 0.0057 17.9 2.4 1 23 513 535 513 535 0.98

10 10 0.00046 0.038 15.3 0.3 1 23 541 564 541 564 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00085	0.071	14.5	0.8	1	23	247	269	247	269	0.93
2	10	6.9e-05	0.0058	17.9	0.2	2	23	277	298	276	298	0.96
3	10	0.00026	0.021	16.1	0.3	3	23	332	353	331	353	0.97
4	10	0.12	9.7	7.8	6.5	1	23	357	380	357	380	0.98
5	10	5.1e-05	0.0042	18.3	3.4	2	23	387	409	386	409	0.97
6	10	0.11	9.1	7.9	0.3	3	21	422	440	421	445	0.93
7	10	0.00018	0.015	16.6	3.3	1	23	453	476	453	476	0.95
8	10	0.00088	0.073	14.4	2.0	1	23	482	505	482	505	0.97
9	10	6.9e-05	0.0057	17.9	2.4	1	23	513	535	513	535	0.98
10	10	0.00046	0.038	15.3	0.3	1	23	541	564	541	564	0.92

Sequence Information

Coding Sequence: ATGTTTAGAACTGACGGCGACAGGGCCGCGAGGCGGTCTCGCCACGCTGCCAGCATGTGTGCCACCTGCCTCGCCGCTGACAGAGCGCTCTTTTCCCTTAAGAATACACCGCAGTTCGTTAACATCTGCTCTGGACTGAATCTATCAATGGCCGACATGGTATGCTTCGAATGCCGGGCAATACTTAGGAATTTTGTCAAGTTCAGAAACCGTGCGCTACGTGCTGAGAAACTGCTGGAGTGTGTGCCTCCCAGCTGTAACTTAAAGAACTCACAGTCCTTTCCCGGGTTCCAATGTCTCTCCACATTGACAGAGACAGTCATACCAGCACACAAAACTATCTATATAGGCCATAACTCAGATGGAGTGAAGGAAGAGGTCTTCCACTCACAAGTCAAACAAGAGAGGTCCGAGTCTATAATAACGTCCGTCGAGCCGTACGTTCCAATGGATTGCTTGAAGACTGAGGGCTACAGTTCGACTGAAGAAGAGGCAATGAATGTGAAGACTGAGGCGAAAGAACGTATCGGTGTCAAAAGTAATGACGAGGAAACGGAAACTTGGGTAGAGGTTGACGAGGTGAAGCCGCAAAAGCTGGAGGAAGTACTTGTGACTGCCGGCCGTCCAAACAGGCCATTTAGCGAAGTGCCATACTTCGACGTTAAACAGATTGATCACGACGAGGCGGTCGGCTTCTTAGCGCGCGAACGGGAGACGGACGCTTATAAGCGCGCGCCGTTCAAGTGCGACAAGTGTGCGCTCGCCTTTAGAAGCGAGAAGAATTTGAAAAATCATAATGCGCTGCATAGTGAGCAACGCGGCACGTTAGTATGCGACATCTGCGACCAACGCTTCAGAAAATCGCCGGACTTGACAGCTCACACCGCCAAACATTACACCCGCTACGACTGCAAGCACTGCGCCCGTGTCGACAGCATCCGCGCTCGCATGGACGAACACTACAGGCGGAAGCACGACCGGTCGCCGCGACCGTGCCCCAAGTGCTCCGAGACCTTCACGAGCTACGCGGACATGTTACAACACAAACGGACAGCTCACGCGACCGAGTACACGTGTGAACACTGCTGTCGCGTCTTCTCTGCCAATTATAAACTGCAGTATCACTTGCAAAGGAAACACACAAAAACGTCTCTGGTGGAGTGTGATGTCTGCCATAAACAGTGCAAGGGACAATACAATCTGCAGAAACACATACGGAAGGCACACAATAAGGAACCCAGCAGCCCCAATGAGAATGCTTACTGTGCTGAGTGCAACATTCAGTTCAAAGAAATCTCCCTGTACAAGGCACATATTAATAACACGTCACGACACGTCGCCGCTAGCGCCTTCAGATACGAGTGCGACTACTGTGGCAAGAAGTTTGTGCACAAACAGTACGTGAGTCACCACATCGAGTTGATGCACCTCAAACTGGCCAAGTACAAGTGTGATGTCTGTAGTCAGAGCTTCCCGACGTCGGTGTACAGAAACCGTCACAAGCGATTGAAGCACGCTGACAAACCGCGCAAGAAATTCGTCTGCCACACTTGCGGGAAAGGTTTCACAGTACGGAAGTCCCTGGATCAACACACTAATTCGCACCTAGGACTCCGGCCCTTTGTCTGCAAGCAATGCGGCGCGACCTTCACATATTCCGCAGCACTTTACACCCACAACCAGCTGGTCCATTTGAAACGGAAGCGCGGAAATCCAATCGCGGAAGAACAATAA
Protein Sequence: MFRTDGDRAARRSRHAASMCATCLAADRALFSLKNTPQFVNICSGLNLSMADMVCFECRAILRNFVKFRNRALRAEKLLECVPPSCNLKNSQSFPGFQCLSTLTETVIPAHKTIYIGHNSDGVKEEVFHSQVKQERSESIITSVEPYVPMDCLKTEGYSSTEEEAMNVKTEAKERIGVKSNDEETETWVEVDEVKPQKLEEVLVTAGRPNRPFSEVPYFDVKQIDHDEAVGFLARERETDAYKRAPFKCDKCALAFRSEKNLKNHNALHSEQRGTLVCDICDQRFRKSPDLTAHTAKHYTRYDCKHCARVDSIRARMDEHYRRKHDRSPRPCPKCSETFTSYADMLQHKRTAHATEYTCEHCCRVFSANYKLQYHLQRKHTKTSLVECDVCHKQCKGQYNLQKHIRKAHNKEPSSPNENAYCAECNIQFKEISLYKAHINNTSRHVAASAFRYECDYCGKKFVHKQYVSHHIELMHLKLAKYKCDVCSQSFPTSVYRNRHKRLKHADKPRKKFVCHTCGKGFTVRKSLDQHTNSHLGLRPFVCKQCGATFTYSAALYTHNQLVHLKRKRGNPIAEEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01543272;
90% Identity: iTF_01543272;
80% Identity: -