Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018372.1:8404906-8423488[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00011 0.0094 17.3 2.5 1 23 380 402 380 402 0.99

2 11 0.0027 0.22 12.9 0.4 1 23 409 431 409 431 0.97

3 11 0.083 6.9 8.2 0.2 1 23 435 458 435 458 0.97

4 11 0.62 52 5.5 5.2 1 23 465 487 465 488 0.96

5 11 9.2e-06 0.00076 20.7 0.6 3 23 495 515 494 515 0.97

6 11 0.00081 0.068 14.6 5.2 1 23 521 543 521 543 0.99

7 11 0.00074 0.062 14.7 2.9 1 22 549 570 549 574 0.92

8 11 0.00022 0.018 16.3 0.1 1 23 582 605 582 605 0.97

9 11 0.029 2.4 9.7 0.1 1 23 611 633 611 633 0.94

10 11 7e-05 0.0058 17.9 2.0 1 23 642 664 642 664 0.98

11 11 0.021 1.8 10.1 1.2 1 23 670 693 670 693 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00011	0.0094	17.3	2.5	1	23	380	402	380	402	0.99
2	11	0.0027	0.22	12.9	0.4	1	23	409	431	409	431	0.97
3	11	0.083	6.9	8.2	0.2	1	23	435	458	435	458	0.97
4	11	0.62	52	5.5	5.2	1	23	465	487	465	488	0.96
5	11	9.2e-06	0.00076	20.7	0.6	3	23	495	515	494	515	0.97
6	11	0.00081	0.068	14.6	5.2	1	23	521	543	521	543	0.99
7	11	0.00074	0.062	14.7	2.9	1	22	549	570	549	574	0.92
8	11	0.00022	0.018	16.3	0.1	1	23	582	605	582	605	0.97
9	11	0.029	2.4	9.7	0.1	1	23	611	633	611	633	0.94
10	11	7e-05	0.0058	17.9	2.0	1	23	642	664	642	664	0.98
11	11	0.021	1.8	10.1	1.2	1	23	670	693	670	693	0.94

Sequence Information

Coding Sequence: ATGGAATTGGATAGCTTAGGAGATACAGAGGAGCTTAAACTAGATATGGAAATGGTAGACACTATCTGTAGGTCGTGTTTATCCACGAATAAAGTGATGCACGATGTCTACCAATATACAGAAGAAATTGCAGCTCTAACCGGCATTCATATCTCCCCGTCGGACGGTCTGCCGCGCTGGCTGTGCGGCGCGTGCCGCGCGCTgctgcgccgcgccgcgcggtTCCGCCGCCAGTGGCACCGTGCGCACTCCCTGCTATACGACTATCTCACGAGGTGTGCGCCGTTCCCGATCGACGCTCAGGACCCGGAGCTGGCGCGGTACGCGGCGCCGCCGCTGCGCCGCGCCCGCACGCTCGCCTTCGACAACTCGCACACCCGCTGCGGGTTCGACGAGCTCCTCCAGGTACTCATCATCGGCAATGGCCTTTGCGTCTTTGGCAGcagcgttAACACGGCACGGTCTGTGTTCCAGCACGAGACGGAGCCGGTAACGTCGCCGCTGCTAGCCGCCGAAGCCCCGCCGGCGCGGGGCAGCCCCGGACTCGAGTTCAAGACTGAGGACGGCTGCTCCGACTACGAGGATGATATACCGCTCGATGAGTACAAGAGCAGTATCGACAAGTTGGCTGCGGATACGCTGGAGAGATTGCTGCAAGACCCAGATGGCTTGCCGCTAGCCGGCGAGGCGGCAGGCGAGCGGGCAGGCGAGGCGGCAGGGAAGTGTGGCAGGAAAAGCAGAAGGGACGACGGAGGCGgcaagaggaagaagaagaaaacacgGCCGGAGCAGGGGGAGACGGAGGCCGAGCCgaggccggcgccggcgccgcgccgcgcggccGAGGCCGTGGACCCGGACAAGATCCGGCTCATTACGCTCAACCCTGAGGAGCAGGTTGGCCTGCTGCTCGAGGCGCGGCCCACACAGACAGGacgcgcgccctcgccccgcggcctctctgtgtggcccacgcccGAGGCCGCTGTTACGTCTAGCATGCCGTCTCGCTTGCACGATAGGTACGGAGCCGTAACAAAAGGTGTTAAGGTGATGCCGATAACCATGCCTCGTTTACATGGCTCGCAGCTGCGGCAGATGCAGGAGGAGAGCCGGGCGGACGGCGCGCGGCTGCCGTTCAAGTGTGCCCTCTGCTTCAAGGGGTTCAACTACGAGACCAAGCTGCAGAACCACATGCGGCGACACAGCCCGTCGCGCGGCCCGTTCGCGTGCGCCCTGTGTCGCACGCACCTGCCCTCCGCGTACTCGCTGCGCGTGCACATGCGCGTTCACACGCTGCGCTACGAGTGCCGCGTGTGCGGGCGCCGCATGGTGGACCGCGGCAGCATCGTGGAGCACTACCGCTCGCAGCACGAGGGCATCGTGTCGCAGTACACCTGCCAGCTGTGCGGGAAGCTCTCCAGCAACAGCAAGACGCACCGCGGACACATGCGCAACCACCACGGCGGCGCGCGGCCCGCCTGCCACCGCTGCGGGAAGACCTTCGTCAACAAGGACTCGCTCGCCGAGCACCTGCTGATCCACGAGGGCGTGAAGAACTACCAGTGCGAGAAGTGTGAGCAGCGGTTCCGCACCAAGAACCAGGCCAAGCACCACCAGCTCAAGCACAGCGACGTGCGAGACCACTACTGCGTCGAGTGCGACGTCAGATTCAAGTCGGCTCACAATTTACGTCAGCATCTCCAGAAAAGCCTCAAACACAAAGATCCCAAGACTTTTAAGTTCGAGTGCGCGGAGTGCGGCAAGCGCTTCGAGAGCGCGGCGCTGCGCGAGCGGCACGCGCGCGTGCAGCACGCCGGCGAGCGGCAGCACGCGTGCGGCGCGTGCGGCGCGGCGCTGGCCTCGCGCGCCGCGCTGCGGAAGCACGCGCGCCGCCACCTGcagccgcgcgcgccgccctcGCACGTGTGCCACGCCTGCGGCCGGGCCTTCCGGGGCAAGTCCGTGCTGCAGAACCACGTGCGCACGCACACGGGCGAGAAGCCGTTCGCGTGCGCGACGTGCGGGCGCCGCTTCGCGCAGCGGACGGCCTGCCGCACGCACGTGCGGCTCGTGCACCTCAAGCTGCGCCGCGCAAAGATAAAGCCGGAGAGCGTGACTGTCACAACGGAGCAGGACGTGAAGCCCGCGCTCGAAGCGAAGCTGCCCGACCCCATGGAGGACAAGATGCCGGCCGACCTCGTCTCCTACTCCGACATCCCTGTCTACTTCTGA
Protein Sequence: MELDSLGDTEELKLDMEMVDTICRSCLSTNKVMHDVYQYTEEIAALTGIHISPSDGLPRWLCGACRALLRRAARFRRQWHRAHSLLYDYLTRCAPFPIDAQDPELARYAAPPLRRARTLAFDNSHTRCGFDELLQVLIIGNGLCVFGSSVNTARSVFQHETEPVTSPLLAAEAPPARGSPGLEFKTEDGCSDYEDDIPLDEYKSSIDKLAADTLERLLQDPDGLPLAGEAAGERAGEAAGKCGRKSRRDDGGGKRKKKKTRPEQGETEAEPRPAPAPRRAAEAVDPDKIRLITLNPEEQVGLLLEARPTQTGRAPSPRGLSVWPTPEAAVTSSMPSRLHDRYGAVTKGVKVMPITMPRLHGSQLRQMQEESRADGARLPFKCALCFKGFNYETKLQNHMRRHSPSRGPFACALCRTHLPSAYSLRVHMRVHTLRYECRVCGRRMVDRGSIVEHYRSQHEGIVSQYTCQLCGKLSSNSKTHRGHMRNHHGGARPACHRCGKTFVNKDSLAEHLLIHEGVKNYQCEKCEQRFRTKNQAKHHQLKHSDVRDHYCVECDVRFKSAHNLRQHLQKSLKHKDPKTFKFECAECGKRFESAALRERHARVQHAGERQHACGACGAALASRAALRKHARRHLQPRAPPSHVCHACGRAFRGKSVLQNHVRTHTGEKPFACATCGRRFAQRTACRTHVRLVHLKLRRAKIKPESVTVTTEQDVKPALEAKLPDPMEDKMPADLVSYSDIPVYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -