Yevo029377.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- ZBTB41
- Assembly
- GCA_963969515.1
- Location
- OZ018370.1:1741574-1744983[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0045 0.37 12.2 0.1 2 20 39 57 38 58 0.95 2 17 5.7e-05 0.0047 18.2 1.5 2 23 129 150 128 150 0.95 3 17 0.0015 0.13 13.7 0.2 2 23 155 177 154 177 0.90 4 17 9.2 7.6e+02 1.8 0.3 1 21 181 201 181 202 0.91 5 17 7.3 6.1e+02 2.1 0.7 3 23 211 232 209 232 0.91 6 17 0.04 3.3 9.2 2.5 1 23 239 262 239 262 0.90 7 17 0.00021 0.017 16.4 1.7 2 23 267 288 266 288 0.96 8 17 0.00096 0.08 14.3 1.0 1 23 294 316 294 316 0.98 9 17 0.015 1.2 10.6 1.8 2 19 354 371 353 376 0.95 10 17 0.00067 0.056 14.8 0.7 2 23 443 464 442 464 0.95 11 17 0.00016 0.013 16.8 0.4 2 23 469 491 468 491 0.90 12 17 0.21 17 7.0 0.3 1 21 495 515 495 516 0.94 13 17 3.1 2.6e+02 3.3 2.4 1 23 523 546 523 546 0.92 14 17 0.013 1.1 10.7 1.1 1 23 553 576 553 576 0.91 15 17 2.7e-05 0.0023 19.2 0.8 1 23 580 602 580 602 0.98 16 17 0.0037 0.31 12.5 0.4 1 23 608 630 608 630 0.94 17 17 0.015 1.3 10.5 2.4 2 23 637 658 636 659 0.95
Sequence Information
- Coding Sequence
- ATGAGATTTGGCTTTGCCCAAGATGACGGAATTAGCAAGATGCGAGACAATGCGACATTGATCTTGAAAAGCTCCACAGCGTATCCGTTCAAGGTGACCAGGAACATGCACATCCAGTGCTTTTTCTGTCCCAAGGACTTTGAGGACCCTGTCGAATTCAGAAGGCACATCGACTGTTTACATTATGGTCTCGATAGATCTAGTGCATTTAACGAGCTCAAGTGTTTAAGAATCGATATCACTGACCTCCTTTGCAGACTATGTGCGATGCCGCACGATACCTTGGCTTCCTTGTCGGAGCATCTCCGAAACCAACATAATCTGGATCTCGATCCAACCATGAAATTAAATCTTCTTCCCATTAAACTGGAGAAGGACACGCTTATTTGTGCTACTTGTGGCAAAACCTTCACCTCTCACAGGGATCTGTCAAAGCATCTATACGTACACTCGCTTGGACTAATCTGCGACATATGTGGCAAGCAATTTCAAACGAAAACTGGCTTGAAGGGCCACACGGCAGAAAAGCACAATCGAACATTCAGATGCATACAGTGCAAACAGCAGTTTGCTACTACAAACGAAAGGATCCAACACGTGCGTGAGAACAAGTCCTGCTGGCCCTACGGCTGCGGGTCGTGCAAGGAGCGATTTCACTTCTGGGAGGCGAGACAAATGCACTTAGAGCAGGTGCACGGACGAGAGAAAATCACGTTCGTGTGCAAGGAATGCGGTATAGTGTTTGAAAAACGAATACAGCTATACTTTCACCACAAAAAGACTCACACTGAGGATTTAAAGTGTCATGTGTGTGAGGAAAGTTTCCGCACTAAAAAGGAGTTACTGGAACATGGGTACACACACACTGGCGAGAGGCCTTATAAGTGTCCGCATTGCGATGCCTCGTTTGCGAGGACTAGAATTTATGAGTCGCATATAAAAATCCACGACGATAGCTTTGCCCAGGATGTCGGATATGACAAGATGCGAGACAGTGCGAGGTTGATATTGAAACACTCGACGGCGTATCCATTCAAGTTTACCAAGGACGAGCGTATCCAGTGTTCGTTCTGTCCCAAGGACTTTGAAGACCCTAACGAGTTCAGAAGGCACTTTGACTGCTCACACTGCAGTGTCGATAGGTCTAGTGAATGTGATAGTATGTTCATGCGAATAGACATCACTAACCTACGCTGCAGGCTATGTCGGACGTCGCACGATACGCTTGTATCTCTGGCCACGCATCTTCGAGACAAACATAGTATCGATGTCGATCCCACGATCAAATTAAATCTACTTCCCCTAAAATTGGAGGTGGGTGCGCTGGTTTGTGCTACATGCGGCATAAATTTCTCGTCTCACAAGGAGCTGTCAAAGCATCTATACGTTCACTCGCTTGGACTAATATGTGACATGTGTGGCAAGCAATTTCAAACGAAAGGCGGTTTGAAGAGACACACGGCGGAaaagcacaatttaacatttcaaTGCAGACAGTGCAGGAAACTGTTTGCTACAGCAAACGACAGGCTCCAACACGTGCGCGCCAACAAATCCTGCTGGCCGTACAGTTGTAGGTCGTGCAAGGAGCGTTTTCACTTCTGGGAAATGAGACAAATGCACTTGGAGCAGGTGCACGGCCATGAGAAAATCACATTCCTGTGCAAGGAATGCGGTCTCGTGTTTCGGAGGAGACAGGAGCAGTACGATCATAATAAAAAGGTTCACACTAAAGACTTCAAATGCCAGGTTTGCGATAGGAGTTTTCGCGTTAAAAAAGAGTTAATCGAGCATGCTTACACACACACTGGCGAGAGGCCTTATAAGTGTCCGTATTGCGATGCCTCGTTTGCGAGAACCAGAATTTACGACTCCCATATAAAAATCCACGATGATAGTAAGAAACAACGTTGTCCTGTGTGCAGTAAACTGTTTGTGGAGAAGTCAAGAATTAAGAGGCATGTCAATAAGCATCATCCGGAAATATTCGAGCAATGGGCAGTCTCCATGAATTATAAGATTtga
- Protein Sequence
- MRFGFAQDDGISKMRDNATLILKSSTAYPFKVTRNMHIQCFFCPKDFEDPVEFRRHIDCLHYGLDRSSAFNELKCLRIDITDLLCRLCAMPHDTLASLSEHLRNQHNLDLDPTMKLNLLPIKLEKDTLICATCGKTFTSHRDLSKHLYVHSLGLICDICGKQFQTKTGLKGHTAEKHNRTFRCIQCKQQFATTNERIQHVRENKSCWPYGCGSCKERFHFWEARQMHLEQVHGREKITFVCKECGIVFEKRIQLYFHHKKTHTEDLKCHVCEESFRTKKELLEHGYTHTGERPYKCPHCDASFARTRIYESHIKIHDDSFAQDVGYDKMRDSARLILKHSTAYPFKFTKDERIQCSFCPKDFEDPNEFRRHFDCSHCSVDRSSECDSMFMRIDITNLRCRLCRTSHDTLVSLATHLRDKHSIDVDPTIKLNLLPLKLEVGALVCATCGINFSSHKELSKHLYVHSLGLICDMCGKQFQTKGGLKRHTAEKHNLTFQCRQCRKLFATANDRLQHVRANKSCWPYSCRSCKERFHFWEMRQMHLEQVHGHEKITFLCKECGLVFRRRQEQYDHNKKVHTKDFKCQVCDRSFRVKKELIEHAYTHTGERPYKCPYCDASFARTRIYDSHIKIHDDSKKQRCPVCSKLFVEKSRIKRHVNKHHPEIFEQWAVSMNYKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -